RNA–Protein interactions for RNA: ENST00000508541.1

SLIT2-205, Transcript of slit guidance ligand 2, humanhuman

TSL 2

Gene SLIT2, Length 2,947 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT2-205ENST00000508541 ZNF771Q7L3S4 317 aaPredicted RBP11.36□□□□□ -0.59
SLIT2-205ENST00000508541 BCL2L12Q9HB09 334 aa11.36□□□□□ -0.59
SLIT2-205ENST00000508541 ABCC5O15440 1437 aa11.35□□□□□ -0.59
SLIT2-205ENST00000508541 GOLGA6L22H0YM25 854 aa11.35□□□□□ -0.59
SLIT2-205ENST00000508541 U2AF2P26368 475 aaKnown RBP eCLIP11.35□□□□□ -0.59
SLIT2-205ENST00000508541 KCNJ4P48050 445 aa11.35□□□□□ -0.59
SLIT2-205ENST00000508541 KIAA2012Q0VF49 1180 aa11.35□□□□□ -0.59
SLIT2-205ENST00000508541 CCDC146Q8IYE0 955 aa11.35□□□□□ -0.59
SLIT2-205ENST00000508541 KDM2AQ9Y2K7 1162 aa11.35□□□□□ -0.59
SLIT2-205ENST00000508541 E9PSI1 815 aa11.35□□□□□ -0.59
SLIT2-205ENST00000508541 CHMP4AQ9BY43 222 aa11.35□□□□□ -0.59
SLIT2-205ENST00000508541 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.35□□□□□ -0.59
SLIT2-205ENST00000508541 NBPF1Q3BBV0 1214 aa11.34□□□□□ -0.59
SLIT2-205ENST00000508541 PDCL2Q8N4E4 241 aa11.34□□□□□ -0.59
SLIT2-205ENST00000508541 CADPSQ9ULU8 1353 aa11.34□□□□□ -0.59
SLIT2-205ENST00000508541 DNMT1P26358 1616 aaKnown RBP11.34□□□□□ -0.59
SLIT2-205ENST00000508541 CHRM1P11229 460 aaPredicted RBP11.34□□□□□ -0.59
SLIT2-205ENST00000508541 PKD2Q13563 968 aa11.34□□□□□ -0.59
SLIT2-205ENST00000508541 NINLQ9Y2I6 1382 aa11.34□□□□□ -0.59
SLIT2-205ENST00000508541 KIF3AQ9Y496 699 aa11.34□□□□□ -0.59
SLIT2-205ENST00000508541 AK9Q5TCS8 1911 aa11.33□□□□□ -0.59
SLIT2-205ENST00000508541 KIF2CQ99661 725 aa11.33□□□□□ -0.6
SLIT2-205ENST00000508541 LMBRD1Q9NUN5 540 aa11.33□□□□□ -0.6
SLIT2-205ENST00000508541 ARHGEF12Q9NZN5 1544 aa11.33□□□□□ -0.6
SLIT2-205ENST00000508541 TEX2Q8IWB9 1127 aa11.33□□□□□ -0.6
SLIT2-205ENST00000508541 RBM27Q9P2N5 1060 aaKnown RBP11.33□□□□□ -0.6
SLIT2-205ENST00000508541 APAF1O14727 1248 aa11.32□□□□□ -0.6
SLIT2-205ENST00000508541 VGFO15240 615 aaPredicted RBP11.32□□□□□ -0.6
SLIT2-205ENST00000508541 PPP2R1AP30153 589 aa11.32□□□□□ -0.6
SLIT2-205ENST00000508541 SLC20A2Q08357 652 aa11.32□□□□□ -0.6
SLIT2-205ENST00000508541 MCTP1Q6DN14 999 aa11.32□□□□□ -0.6
SLIT2-205ENST00000508541 GAS2L2Q8NHY3 880 aa11.32□□□□□ -0.6
SLIT2-205ENST00000508541 SECISBP2LQ93073 1101 aaKnown RBP11.32□□□□□ -0.6
SLIT2-205ENST00000508541 CERS3Q8IU89 383 aa11.32□□□□□ -0.6
SLIT2-205ENST00000508541 RWDD1Q9H446 243 aaPredicted RBP11.32□□□□□ -0.6
SLIT2-205ENST00000508541 RAD54L2Q9Y4B4 1467 aa11.32□□□□□ -0.6
SLIT2-205ENST00000508541 DISP3Q9P2K9 1392 aa11.31□□□□□ -0.6
SLIT2-205ENST00000508541 C17orf53Q8N3J3 647 aaPredicted RBP11.31□□□□□ -0.6
SLIT2-205ENST00000508541 RGS22Q8NE09 1264 aa11.31□□□□□ -0.6
SLIT2-205ENST00000508541 ANKRD30AQ9BXX3 1397 aa11.31□□□□□ -0.6
SLIT2-205ENST00000508541 KIAA0586Q9BVV6 1533 aa11.31□□□□□ -0.6
SLIT2-205ENST00000508541 NESP48681 1621 aa11.3□□□□□ -0.6
SLIT2-205ENST00000508541 ANKRD7Q92527 254 aa11.3□□□□□ -0.6
SLIT2-205ENST00000508541 K7ELQ4 463 aaPredicted RBP11.3□□□□□ -0.6
SLIT2-205ENST00000508541 SLFN14P0C7P3 912 aa11.3□□□□□ -0.6
SLIT2-205ENST00000508541 IRX3P78415 501 aaPredicted RBP11.3□□□□□ -0.6
SLIT2-205ENST00000508541 NOLC1Q14978 699 aaKnown RBP eCLIP11.3□□□□□ -0.6
SLIT2-205ENST00000508541 MPNDQ8N594 471 aa11.3□□□□□ -0.6
SLIT2-205ENST00000508541 GPT2Q8TD30 523 aa11.3□□□□□ -0.6
SLIT2-205ENST00000508541 RBM42Q9BTD8 480 aaKnown RBP11.3□□□□□ -0.6
SLIT2-205ENST00000508541 COL17A1Q9UMD9 1497 aaPredicted RBP11.3□□□□□ -0.6
SLIT2-205ENST00000508541 CAPN2P17655 700 aa11.29□□□□□ -0.6
SLIT2-205ENST00000508541 PIBF1Q8WXW3 757 aa11.29□□□□□ -0.6
SLIT2-205ENST00000508541 FAM135AQ9P2D6 1515 aa11.29□□□□□ -0.6
SLIT2-205ENST00000508541 PTMAP06454 111 aaKnown RBP11.29□□□□□ -0.6
SLIT2-205ENST00000508541 LRSAM1Q6UWE0 723 aa11.29□□□□□ -0.6
SLIT2-205ENST00000508541 RNF214Q8ND24 703 aa11.29□□□□□ -0.6
SLIT2-205ENST00000508541 DNAJC2Q99543 621 aaKnown RBP11.29□□□□□ -0.6
SLIT2-205ENST00000508541 TMEM63CQ9P1W3 806 aa11.28□□□□□ -0.6
SLIT2-205ENST00000508541 ZNF644Q9H582 1327 aaPredicted RBP11.28□□□□□ -0.6
SLIT2-205ENST00000508541 SYCE3A1L190 88 aa11.28□□□□□ -0.6
SLIT2-205ENST00000508541 TESK2Q96S53 571 aa11.28□□□□□ -0.6
SLIT2-205ENST00000508541 RARSP54136 660 aaKnown RBP11.27□□□□□ -0.6
SLIT2-205ENST00000508541 GABPB1Q06547 395 aaPredicted RBP11.27□□□□□ -0.6
SLIT2-205ENST00000508541 FEZ1Q99689 392 aa11.27□□□□□ -0.6
SLIT2-205ENST00000508541 OGFRQ9NZT2 677 aa11.27□□□□□ -0.6
SLIT2-205ENST00000508541 PLXNC1O60486 1568 aa11.27□□□□□ -0.61
SLIT2-205ENST00000508541 DNMBPQ6XZF7 1577 aa11.27□□□□□ -0.61
SLIT2-205ENST00000508541 FKBP5Q13451 457 aaPredicted RBP11.26□□□□□ -0.61
SLIT2-205ENST00000508541 PKP1Q13835 747 aa11.26□□□□□ -0.61
SLIT2-205ENST00000508541 NSFL1CQ9UNZ2 370 aaKnown RBP11.26□□□□□ -0.61
SLIT2-205ENST00000508541 POLA1P09884 1462 aaPredicted RBP11.26□□□□□ -0.61
SLIT2-205ENST00000508541 TULP2O00295 520 aa11.26□□□□□ -0.61
SLIT2-205ENST00000508541 PRPF40AO75400 957 aaKnown RBP11.26□□□□□ -0.61
SLIT2-205ENST00000508541 SPTLC3Q9NUV7 552 aa11.26□□□□□ -0.61
SLIT2-205ENST00000508541 SHROOM2Q13796 1616 aa11.26□□□□□ -0.61
SLIT2-205ENST00000508541 CYP2E1P05181 493 aaPredicted RBP11.25□□□□□ -0.61
SLIT2-205ENST00000508541 CDK13Q14004 1512 aaKnown RBP11.25□□□□□ -0.61
SLIT2-205ENST00000508541 RIOK3O14730 519 aaKnown RBP11.25□□□□□ -0.61
SLIT2-205ENST00000508541 TIGD1Q96MW7 591 aa11.25□□□□□ -0.61
SLIT2-205ENST00000508541 BCL2L13Q9BXK5 485 aa11.25□□□□□ -0.61
SLIT2-205ENST00000508541 TTC12Q9H892 705 aaPredicted RBP11.25□□□□□ -0.61
SLIT2-205ENST00000508541 AEBP1Q8IUX7 1158 aa11.24□□□□□ -0.61
SLIT2-205ENST00000508541 CHAMP1Q96JM3 812 aa11.24□□□□□ -0.61
SLIT2-205ENST00000508541 CTIFO43310 598 aaKnown RBP11.24□□□□□ -0.61
SLIT2-205ENST00000508541 ZBTB9Q96C00 473 aa11.24□□□□□ -0.61
SLIT2-205ENST00000508541 ABCC2Q92887 1545 aa11.24□□□□□ -0.61
SLIT2-205ENST00000508541 TRIM6-TRIM34B2RNG4 842 aa11.23□□□□□ -0.61
SLIT2-205ENST00000508541 TRIM34Q9BYJ4 488 aa11.23□□□□□ -0.61
SLIT2-205ENST00000508541 CTNNA3Q9UI47 895 aa11.23□□□□□ -0.61
SLIT2-205ENST00000508541 MAGI2Q86UL8 1455 aa11.23□□□□□ -0.61
SLIT2-205ENST00000508541 FANCD2Q9BXW9 1451 aa11.23□□□□□ -0.61
SLIT2-205ENST00000508541 CCDC66A2RUB6 948 aa11.23□□□□□ -0.61
SLIT2-205ENST00000508541 TERF2Q15554 542 aa11.23□□□□□ -0.61
SLIT2-205ENST00000508541 KIF16BQ96L93 1317 aa11.23□□□□□ -0.61
SLIT2-205ENST00000508541 ADGBQ8N7X0 1667 aa11.22□□□□□ -0.61
SLIT2-205ENST00000508541 CEP170Q5SW79 1584 aa11.22□□□□□ -0.61
SLIT2-205ENST00000508541 TOPBP1Q92547 1522 aa11.22□□□□□ -0.61
SLIT2-205ENST00000508541 NPC1L1Q9UHC9 1359 aa11.22□□□□□ -0.61
SLIT2-205ENST00000508541 WWC1Q8IX03 1113 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms