RNA–Protein interactions for RNA: ENST00000506842.1

HERC6-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-207ENST00000506842 NUTM2AQ8IVF1 878 aaPredicted RBP8.81□□□□□ -1
HERC6-207ENST00000506842 NECTIN2Q92692 538 aa8.81□□□□□ -1
HERC6-207ENST00000506842 RAD21O60216 631 aa8.8□□□□□ -1
HERC6-207ENST00000506842 KMT5BQ4FZB7 885 aa8.8□□□□□ -1
HERC6-207ENST00000506842 LRCH3Q96II8 777 aa8.8□□□□□ -1
HERC6-207ENST00000506842 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.8□□□□□ -1
HERC6-207ENST00000506842 AP1G2O75843 785 aa8.79□□□□□ -1
HERC6-207ENST00000506842 USP17L8P0C7I0 530 aa8.79□□□□□ -1
HERC6-207ENST00000506842 MTMR2Q13614 643 aa8.79□□□□□ -1
HERC6-207ENST00000506842 APBB1O00213 710 aa8.78□□□□□ -1
HERC6-207ENST00000506842 ACTN4O43707 911 aaKnown RBP8.78□□□□□ -1
HERC6-207ENST00000506842 HOMEZQ8IX15 550 aa8.78□□□□□ -1
HERC6-207ENST00000506842 SCRIBQ14160 1630 aa8.78□□□□□ -1
HERC6-207ENST00000506842 ARID3CA6NKF2 412 aa8.77□□□□□ -1.01
HERC6-207ENST00000506842 RNF40O75150 1001 aa8.77□□□□□ -1.01
HERC6-207ENST00000506842 MORN1Q5T089 497 aa8.77□□□□□ -1.01
HERC6-207ENST00000506842 SOWAHBA6NEL2 793 aa8.76□□□□□ -1.01
HERC6-207ENST00000506842 ANKK1Q8NFD2 765 aa8.76□□□□□ -1.01
HERC6-207ENST00000506842 CFAP99D6REC4 459 aa8.75□□□□□ -1.01
HERC6-207ENST00000506842 ANKRD13DQ6ZTN6 518 aa8.75□□□□□ -1.01
HERC6-207ENST00000506842 GJD4Q96KN9 370 aaPredicted RBP8.75□□□□□ -1.01
HERC6-207ENST00000506842 PRR14Q9BWN1 585 aa8.75□□□□□ -1.01
HERC6-207ENST00000506842 C6orf229H3BNL8 230 aa8.73□□□□□ -1.01
HERC6-207ENST00000506842 CTDSPL2Q05D32 466 aa8.73□□□□□ -1.01
HERC6-207ENST00000506842 HELBQ8NG08 1087 aaPredicted RBP8.73□□□□□ -1.01
HERC6-207ENST00000506842 GDPD2Q9HCC8 539 aa8.73□□□□□ -1.01
HERC6-207ENST00000506842 SLC27A5Q9Y2P5 690 aa8.73□□□□□ -1.01
HERC6-207ENST00000506842 GOLGA8CPA6NN73 597 aa8.72□□□□□ -1.01
HERC6-207ENST00000506842 RETREG3Q86VR2 466 aa8.72□□□□□ -1.01
HERC6-207ENST00000506842 SYMPKQ92797 1274 aaKnown RBP8.72□□□□□ -1.01
HERC6-207ENST00000506842 STAC3Q96MF2 364 aa8.72□□□□□ -1.01
HERC6-207ENST00000506842 KRTAP3-3Q9BYR6 98 aa8.72□□□□□ -1.01
HERC6-207ENST00000506842 KRTAP3-2Q9BYR7 98 aa8.72□□□□□ -1.01
HERC6-207ENST00000506842 TBC1D2BQ9UPU7 963 aa8.72□□□□□ -1.01
HERC6-207ENST00000506842 HPS5Q9UPZ3 1129 aa8.72□□□□□ -1.01
HERC6-207ENST00000506842 EIF4G1Q04637 1599 aaKnown RBP8.71□□□□□ -1.02
HERC6-207ENST00000506842 BCAMP50895 628 aa8.71□□□□□ -1.02
HERC6-207ENST00000506842 PPP4CP60510 307 aa8.71□□□□□ -1.02
HERC6-207ENST00000506842 Q3C1V9 767 aa8.71□□□□□ -1.02
HERC6-207ENST00000506842 PUS10Q3MIT2 529 aaKnown RBP8.71□□□□□ -1.02
HERC6-207ENST00000506842 PRR7Q8TB68 274 aa8.71□□□□□ -1.02
HERC6-207ENST00000506842 TRIM34Q9BYJ4 488 aa8.71□□□□□ -1.02
HERC6-207ENST00000506842 PRM3Q9NNZ6 103 aa8.71□□□□□ -1.02
HERC6-207ENST00000506842 HMX1Q9NP08 348 aaPredicted RBP8.71□□□□□ -1.02
HERC6-207ENST00000506842 TSR3Q9UJK0 312 aaKnown RBP8.71□□□□□ -1.02
HERC6-207ENST00000506842 ZNF777Q9ULD5 760 aaPredicted RBP8.71□□□□□ -1.02
HERC6-207ENST00000506842 SALL2Q9Y467 1007 aaPredicted RBP8.71□□□□□ -1.02
HERC6-207ENST00000506842 CC2D2AQ9P2K1 1620 aa8.71□□□□□ -1.02
HERC6-207ENST00000506842 GPR37L1O60883 481 aa8.7□□□□□ -1.02
HERC6-207ENST00000506842 APLP1P51693 650 aa8.7□□□□□ -1.02
HERC6-207ENST00000506842 WNT2BQ93097 391 aa8.7□□□□□ -1.02
HERC6-207ENST00000506842 DESI1Q6ICB0 168 aa8.69□□□□□ -1.02
HERC6-207ENST00000506842 CCDC82Q8N4S0 544 aa8.69□□□□□ -1.02
HERC6-207ENST00000506842 LRRN4Q8WUT4 740 aa8.69□□□□□ -1.02
HERC6-207ENST00000506842 PLSCR2Q9NRY7 297 aa8.69□□□□□ -1.02
HERC6-207ENST00000506842 ZNF330Q9Y3S2 320 aaPredicted RBP8.69□□□□□ -1.02
HERC6-207ENST00000506842 NDUFB9Q9Y6M9 179 aa8.69□□□□□ -1.02
HERC6-207ENST00000506842 CECR2Q9BXF3 1484 aa8.69□□□□□ -1.02
HERC6-207ENST00000506842 ABL2P42684 1182 aa8.68□□□□□ -1.02
HERC6-207ENST00000506842 BRICD5Q6PL45 260 aa8.68□□□□□ -1.02
HERC6-207ENST00000506842 IRF5Q13568 498 aa8.67□□□□□ -1.02
HERC6-207ENST00000506842 BLOC1S3Q6QNY0 202 aa8.67□□□□□ -1.02
HERC6-207ENST00000506842 RNF19BQ6ZMZ0 732 aa8.67□□□□□ -1.02
HERC6-207ENST00000506842 WWC1Q8IX03 1113 aa8.67□□□□□ -1.02
HERC6-207ENST00000506842 THAP11Q96EK4 314 aa8.67□□□□□ -1.02
HERC6-207ENST00000506842 ARID3AQ99856 593 aa8.67□□□□□ -1.02
HERC6-207ENST00000506842 SCUBE3Q8IX30 993 aa8.66□□□□□ -1.02
HERC6-207ENST00000506842 TSC1Q92574 1164 aa8.66□□□□□ -1.02
HERC6-207ENST00000506842 PCDHB3Q9Y5E6 796 aa8.66□□□□□ -1.02
HERC6-207ENST00000506842 PER1O15534 1290 aaPredicted RBP8.65□□□□□ -1.02
HERC6-207ENST00000506842 USB1Q9BQ65 265 aaKnown RBP8.65□□□□□ -1.02
HERC6-207ENST00000506842 WBP1LQ9NX94 342 aa8.65□□□□□ -1.02
HERC6-207ENST00000506842 NR1I2O75469 434 aa8.64□□□□□ -1.03
HERC6-207ENST00000506842 LYPD8Q6UX82 237 aa8.64□□□□□ -1.03
HERC6-207ENST00000506842 THSD4Q6ZMP0 1018 aa8.64□□□□□ -1.03
HERC6-207ENST00000506842 SERPINA10Q9UK55 444 aa8.64□□□□□ -1.03
HERC6-207ENST00000506842 FMNL1O95466 1100 aaPredicted RBP8.63□□□□□ -1.03
HERC6-207ENST00000506842 EPS8L1Q8TE68 723 aa8.63□□□□□ -1.03
HERC6-207ENST00000506842 POM121CA8CG34 1229 aa8.62□□□□□ -1.03
HERC6-207ENST00000506842 WASHC4Q2M389 1173 aa8.62□□□□□ -1.03
HERC6-207ENST00000506842 NR6A1Q15406 480 aa8.61□□□□□ -1.03
HERC6-207ENST00000506842 CCDC97Q96F63 343 aaPredicted RBP8.61□□□□□ -1.03
HERC6-207ENST00000506842 MSS51Q4VC12 460 aa8.6□□□□□ -1.03
HERC6-207ENST00000506842 NYAP1Q6ZVC0 841 aa8.6□□□□□ -1.03
HERC6-207ENST00000506842 F12P00748 615 aaPredicted RBP8.59□□□□□ -1.03
HERC6-207ENST00000506842 JUNDP17535 347 aa8.59□□□□□ -1.03
HERC6-207ENST00000506842 GLMNQ92990 594 aa8.59□□□□□ -1.03
HERC6-207ENST00000506842 POTEMA6NI47 508 aa8.58□□□□□ -1.04
HERC6-207ENST00000506842 PTPRNQ16849 979 aa8.58□□□□□ -1.04
HERC6-207ENST00000506842 KCTD12Q96CX2 325 aaKnown RBP8.58□□□□□ -1.04
HERC6-207ENST00000506842 FAM160A2Q8N612 972 aaPredicted RBP8.57□□□□□ -1.04
HERC6-207ENST00000506842 ADAMTS19Q8TE59 1207 aa8.57□□□□□ -1.04
HERC6-207ENST00000506842 CALR3Q96L12 384 aaKnown RBP8.57□□□□□ -1.04
HERC6-207ENST00000506842 DXOO77932 396 aaKnown RBP8.56□□□□□ -1.04
HERC6-207ENST00000506842 MMP16P51512 607 aa8.56□□□□□ -1.04
HERC6-207ENST00000506842 SPSB2Q99619 263 aa8.56□□□□□ -1.04
HERC6-207ENST00000506842 COPS2P61201 443 aa8.55□□□□□ -1.04
HERC6-207ENST00000506842 VAC14Q08AM6 782 aa8.55□□□□□ -1.04
HERC6-207ENST00000506842 POTEGQ6S5H5 508 aa8.55□□□□□ -1.04
HERC6-207ENST00000506842 PNMA1Q8ND90 353 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms