RNA–Protein interactions for RNA: ENST00000506137.1

HTT-203, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-203ENST00000506137 OTUD6BQ8N6M0 293 aa11.41□□□□□ -0.58
HTT-203ENST00000506137 SF3A1Q15459 793 aaKnown RBP11.4□□□□□ -0.58
HTT-203ENST00000506137 SND1Q7KZF4 910 aaKnown RBP eCLIP11.4□□□□□ -0.58
HTT-203ENST00000506137 RAB11FIP3O75154 756 aa11.39□□□□□ -0.59
HTT-203ENST00000506137 HSP90AA1P07900 732 aaKnown RBP11.39□□□□□ -0.59
HTT-203ENST00000506137 CALD1Q05682 793 aaKnown RBP11.39□□□□□ -0.59
HTT-203ENST00000506137 PROSER2Q86WR7 435 aaPredicted RBP11.39□□□□□ -0.59
HTT-203ENST00000506137 JPH4Q96JJ6 628 aa11.39□□□□□ -0.59
HTT-203ENST00000506137 EPRSP07814 1512 aaKnown RBP11.39□□□□□ -0.59
HTT-203ENST00000506137 PPFIA4O75335 1185 aa11.38□□□□□ -0.59
HTT-203ENST00000506137 IRX3P78415 501 aaPredicted RBP11.38□□□□□ -0.59
HTT-203ENST00000506137 MSL3Q8N5Y2 521 aaKnown RBP11.38□□□□□ -0.59
HTT-203ENST00000506137 COMMD10Q9Y6G5 202 aa11.38□□□□□ -0.59
HTT-203ENST00000506137 FOXD4Q12950 439 aaPredicted RBP11.37□□□□□ -0.59
HTT-203ENST00000506137 CLEC4GQ6UXB4 293 aa11.37□□□□□ -0.59
HTT-203ENST00000506137 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.37□□□□□ -0.59
HTT-203ENST00000506137 MAF1Q9H063 256 aa11.37□□□□□ -0.59
HTT-203ENST00000506137 CC2D1BQ5T0F9 858 aaKnown RBP11.36□□□□□ -0.59
HTT-203ENST00000506137 POTEAQ6S8J7 498 aa11.36□□□□□ -0.59
HTT-203ENST00000506137 PNISRQ8TF01 805 aaKnown RBP11.36□□□□□ -0.59
HTT-203ENST00000506137 RYDENQ9NUL5 291 aaKnown RBP11.36□□□□□ -0.59
HTT-203ENST00000506137 ABCC2Q92887 1545 aa11.35□□□□□ -0.59
HTT-203ENST00000506137 COPB2P35606 906 aa11.35□□□□□ -0.59
HTT-203ENST00000506137 HELBQ8NG08 1087 aaPredicted RBP11.35□□□□□ -0.59
HTT-203ENST00000506137 SH3BP1Q9Y3L3 701 aa11.35□□□□□ -0.59
HTT-203ENST00000506137 RPS6KL1Q9Y6S9 549 aa11.35□□□□□ -0.59
HTT-203ENST00000506137 TCERG1O14776 1098 aaKnown RBP11.34□□□□□ -0.59
HTT-203ENST00000506137 PIP4K2BP78356 416 aa11.34□□□□□ -0.59
HTT-203ENST00000506137 HSP90AB3PQ58FF7 597 aa11.34□□□□□ -0.59
HTT-203ENST00000506137 PPARGC1BQ86YN6 1023 aaKnown RBP11.34□□□□□ -0.59
HTT-203ENST00000506137 FRMD4BQ9Y2L6 1034 aa11.34□□□□□ -0.59
HTT-203ENST00000506137 CENPJQ9HC77 1338 aaPredicted RBP11.34□□□□□ -0.59
HTT-203ENST00000506137 PEX14O75381 377 aa11.33□□□□□ -0.6
HTT-203ENST00000506137 APLP1P51693 650 aa11.33□□□□□ -0.6
HTT-203ENST00000506137 CSPP1Q1MSJ5 1256 aa11.33□□□□□ -0.6
HTT-203ENST00000506137 CEP126Q9P2H0 1117 aa11.33□□□□□ -0.6
HTT-203ENST00000506137 CUL7Q14999 1698 aa11.33□□□□□ -0.6
HTT-203ENST00000506137 FGD5Q6ZNL6 1462 aa11.32□□□□□ -0.6
HTT-203ENST00000506137 HSP90AB2PQ58FF8 381 aa11.32□□□□□ -0.6
HTT-203ENST00000506137 ZNF280DQ6N043 979 aa11.32□□□□□ -0.6
HTT-203ENST00000506137 MRRFQ96E11 262 aaKnown RBP11.32□□□□□ -0.6
HTT-203ENST00000506137 ZBTB12Q9Y330 459 aaPredicted RBP11.32□□□□□ -0.6
HTT-203ENST00000506137 BSDC1Q9NW68 430 aaPredicted RBP11.31□□□□□ -0.6
HTT-203ENST00000506137 ADAMTS12P58397 1594 aa11.31□□□□□ -0.6
HTT-203ENST00000506137 SSR1P43307 286 aaKnown RBP11.3□□□□□ -0.6
HTT-203ENST00000506137 ZC3H6P61129 1189 aaKnown RBP11.3□□□□□ -0.6
HTT-203ENST00000506137 NKX1-1Q15270 411 aaPredicted RBP11.3□□□□□ -0.6
HTT-203ENST00000506137 AMOTL1Q8IY63 956 aa11.3□□□□□ -0.6
HTT-203ENST00000506137 RBM33Q96EV2 1170 aaKnown RBP11.3□□□□□ -0.6
HTT-203ENST00000506137 CCDC194A0A1B0GVG4 234 aa11.29□□□□□ -0.6
HTT-203ENST00000506137 TOM1O60784 492 aa11.29□□□□□ -0.6
HTT-203ENST00000506137 SLC34A2O95436 690 aa11.29□□□□□ -0.6
HTT-203ENST00000506137 MAP4K4O95819 1239 aaPredicted RBP11.29□□□□□ -0.6
HTT-203ENST00000506137 EGFL6Q8IUX8 553 aa11.29□□□□□ -0.6
HTT-203ENST00000506137 CCAR1Q8IX12 1150 aaKnown RBP11.29□□□□□ -0.6
HTT-203ENST00000506137 SENP7Q9BQF6 1050 aa11.29□□□□□ -0.6
HTT-203ENST00000506137 PCDH10Q9P2E7 1040 aa11.29□□□□□ -0.6
HTT-203ENST00000506137 MAGI3Q5TCQ9 1506 aa11.29□□□□□ -0.6
HTT-203ENST00000506137 ABCA5Q8WWZ7 1642 aa11.28□□□□□ -0.6
HTT-203ENST00000506137 SMYD5Q6GMV2 418 aa11.28□□□□□ -0.6
HTT-203ENST00000506137 NOP9Q86U38 636 aaKnown RBP11.28□□□□□ -0.6
HTT-203ENST00000506137 ARHGEF1Q92888 912 aaKnown RBP11.28□□□□□ -0.6
HTT-203ENST00000506137 DDRGK1Q96HY6 314 aa11.28□□□□□ -0.6
HTT-203ENST00000506137 CARD10Q9BWT7 1032 aa11.28□□□□□ -0.6
HTT-203ENST00000506137 KIAA1522Q9P206 1035 aaPredicted RBP11.28□□□□□ -0.6
HTT-203ENST00000506137 USTQ9Y2C2 406 aa11.28□□□□□ -0.6
HTT-203ENST00000506137 SETD1BQ9UPS6 1966 aaKnown RBP11.28□□□□□ -0.6
HTT-203ENST00000506137 SSFA2P28290 1259 aa11.27□□□□□ -0.61
HTT-203ENST00000506137 TAF3Q5VWG9 929 aa11.27□□□□□ -0.61
HTT-203ENST00000506137 SWAP70Q9UH65 585 aa11.27□□□□□ -0.61
HTT-203ENST00000506137 TTC37Q6PGP7 1564 aa11.27□□□□□ -0.61
HTT-203ENST00000506137 ARAP3Q8WWN8 1544 aa11.26□□□□□ -0.61
HTT-203ENST00000506137 EPB41L2O43491 1005 aaKnown RBP11.26□□□□□ -0.61
HTT-203ENST00000506137 IGBP1P78318 339 aa11.26□□□□□ -0.61
HTT-203ENST00000506137 GIMAP6Q6P9H5 292 aa11.26□□□□□ -0.61
HTT-203ENST00000506137 FNBP4Q8N3X1 1017 aaPredicted RBP11.26□□□□□ -0.61
HTT-203ENST00000506137 SPOCK3Q9BQ16 436 aa11.26□□□□□ -0.61
HTT-203ENST00000506137 PNMA2Q9UL42 364 aa11.26□□□□□ -0.61
HTT-203ENST00000506137 PSEN1P49768 467 aa11.25□□□□□ -0.61
HTT-203ENST00000506137 FOSBP53539 338 aa11.25□□□□□ -0.61
HTT-203ENST00000506137 MAMSTRQ6ZN01 415 aa11.25□□□□□ -0.61
HTT-203ENST00000506137 ARMCX6Q7L4S7 300 aa11.25□□□□□ -0.61
HTT-203ENST00000506137 PLSCR2Q9NRY7 297 aa11.25□□□□□ -0.61
HTT-203ENST00000506137 PPP1R1BQ9UD71 204 aaPredicted RBP11.25□□□□□ -0.61
HTT-203ENST00000506137 UHRF1BP1Q6BDS2 1440 aa11.25□□□□□ -0.61
HTT-203ENST00000506137 KIF4AO95239 1232 aa11.24□□□□□ -0.61
HTT-203ENST00000506137 NBPF6Q5VWK0 638 aa11.24□□□□□ -0.61
HTT-203ENST00000506137 NBPF5PQ86XG9 351 aaPredicted RBP11.24□□□□□ -0.61
HTT-203ENST00000506137 NBPF4Q96M43 638 aa11.24□□□□□ -0.61
HTT-203ENST00000506137 CDCA7Q9BWT1 371 aaPredicted RBP11.24□□□□□ -0.61
HTT-203ENST00000506137 GOPCQ9HD26 462 aa11.24□□□□□ -0.61
HTT-203ENST00000506137 TMA7Q9Y2S6 64 aaKnown RBP11.24□□□□□ -0.61
HTT-203ENST00000506137 FER1L4A9Z1Z3 1794 aa11.23□□□□□ -0.61
HTT-203ENST00000506137 POLD1P28340 1107 aa11.23□□□□□ -0.61
HTT-203ENST00000506137 PDE4DQ08499 809 aa11.23□□□□□ -0.61
HTT-203ENST00000506137 C4orf46Q504U0 113 aa11.23□□□□□ -0.61
HTT-203ENST00000506137 ZKSCAN2Q63HK3 967 aa11.23□□□□□ -0.61
HTT-203ENST00000506137 EVI5LQ96CN4 794 aa11.23□□□□□ -0.61
HTT-203ENST00000506137 SCYL1Q96KG9 808 aa11.23□□□□□ -0.61
HTT-203ENST00000506137 ABCF2Q9UG63 623 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms