RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 ERBINQ96RT1 1412 aa16.8■□□□□ 0.28
SRGAP3-210ENST00000491467 PPP1R1BQ9UD71 204 aaPredicted RBP16.8■□□□□ 0.28
SRGAP3-210ENST00000491467 CHD4Q14839 1912 aa16.79■□□□□ 0.28
SRGAP3-210ENST00000491467 PTCH1Q13635 1447 aa16.79■□□□□ 0.28
SRGAP3-210ENST00000491467 MARF1Q9Y4F3 1742 aaKnown RBP16.78■□□□□ 0.28
SRGAP3-210ENST00000491467 EN1Q05925 392 aaPredicted RBP16.77■□□□□ 0.28
SRGAP3-210ENST00000491467 EIF4G2P78344 907 aaKnown RBP eCLIP16.76■□□□□ 0.27
SRGAP3-210ENST00000491467 GLI3P10071 1580 aa16.73■□□□□ 0.27
SRGAP3-210ENST00000491467 EIF2AK4Q9P2K8 1649 aaKnown RBP16.72■□□□□ 0.27
SRGAP3-210ENST00000491467 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.71■□□□□ 0.27
SRGAP3-210ENST00000491467 DDX10Q13206 875 aaKnown RBP16.71■□□□□ 0.27
SRGAP3-210ENST00000491467 IDI1Q13907 227 aa16.71■□□□□ 0.27
SRGAP3-210ENST00000491467 SEPT12Q8IYM1 358 aa16.71■□□□□ 0.27
SRGAP3-210ENST00000491467 RALGAPBQ86X10 1494 aa16.71■□□□□ 0.27
SRGAP3-210ENST00000491467 MST1RQ04912 1400 aa16.7■□□□□ 0.26
SRGAP3-210ENST00000491467 RGPD1P0DJD0 1748 aa16.7■□□□□ 0.26
SRGAP3-210ENST00000491467 NINLQ9Y2I6 1382 aa16.69■□□□□ 0.26
SRGAP3-210ENST00000491467 GIGYF1O75420 1035 aaPredicted RBP16.69■□□□□ 0.26
SRGAP3-210ENST00000491467 KRT27Q7Z3Y8 459 aa16.69■□□□□ 0.26
SRGAP3-210ENST00000491467 HSPA5P11021 654 aaKnown RBP16.68■□□□□ 0.26
SRGAP3-210ENST00000491467 DCCP43146 1447 aa16.68■□□□□ 0.26
SRGAP3-210ENST00000491467 MYO5BQ9ULV0 1848 aa16.68■□□□□ 0.26
SRGAP3-210ENST00000491467 TBX22Q9Y458 520 aa16.67■□□□□ 0.26
SRGAP3-210ENST00000491467 PLEKHG1Q9ULL1 1385 aa16.66■□□□□ 0.26
SRGAP3-210ENST00000491467 CCER2I3L3R5 266 aa16.66■□□□□ 0.26
SRGAP3-210ENST00000491467 ARHGAP31Q2M1Z3 1444 aa16.66■□□□□ 0.26
SRGAP3-210ENST00000491467 NBPF8Q3BBV2 869 aa16.66■□□□□ 0.26
SRGAP3-210ENST00000491467 ANP32CO43423 234 aa16.65■□□□□ 0.26
SRGAP3-210ENST00000491467 SPATA31E1Q6ZUB1 1445 aa16.64■□□□□ 0.25
SRGAP3-210ENST00000491467 COL22A1Q8NFW1 1626 aaPredicted RBP16.64■□□□□ 0.25
SRGAP3-210ENST00000491467 CAPN15O75808 1086 aa16.64■□□□□ 0.25
SRGAP3-210ENST00000491467 UNC5CLQ8IV45 518 aa16.64■□□□□ 0.25
SRGAP3-210ENST00000491467 SPON1Q9HCB6 807 aa16.64■□□□□ 0.25
SRGAP3-210ENST00000491467 ADGRB3O60242 1522 aa16.64■□□□□ 0.25
SRGAP3-210ENST00000491467 CCDC144AA2RUR9 1427 aa16.63■□□□□ 0.25
SRGAP3-210ENST00000491467 SLC34A2O95436 690 aa16.63■□□□□ 0.25
SRGAP3-210ENST00000491467 EZH2Q15910 746 aaKnown RBP16.63■□□□□ 0.25
SRGAP3-210ENST00000491467 HDGFP51858 240 aaKnown RBP16.61■□□□□ 0.25
SRGAP3-210ENST00000491467 AMOTL2Q9Y2J4 779 aa16.61■□□□□ 0.25
SRGAP3-210ENST00000491467 E9PCH4 1651 aa16.61■□□□□ 0.25
SRGAP3-210ENST00000491467 A0A0G2JS52 829 aa16.6■□□□□ 0.25
SRGAP3-210ENST00000491467 MYT1Q01538 1121 aa16.6■□□□□ 0.25
SRGAP3-210ENST00000491467 STAC3Q96MF2 364 aa16.6■□□□□ 0.25
SRGAP3-210ENST00000491467 HIRIP3Q9BW71 556 aaPredicted RBP16.6■□□□□ 0.25
SRGAP3-210ENST00000491467 KANK1Q14678 1352 aa16.6■□□□□ 0.25
SRGAP3-210ENST00000491467 LAMC1P11047 1609 aa16.59■□□□□ 0.25
SRGAP3-210ENST00000491467 KCNQ2O43526 872 aa16.59■□□□□ 0.25
SRGAP3-210ENST00000491467 CCDC9Q9Y3X0 531 aaKnown RBP16.58■□□□□ 0.24
SRGAP3-210ENST00000491467 SOS2Q07890 1332 aaPredicted RBP16.58■□□□□ 0.24
SRGAP3-210ENST00000491467 TRPM1Q7Z4N2 1603 aa16.58■□□□□ 0.24
SRGAP3-210ENST00000491467 TNS1Q9HBL0 1735 aaKnown RBP16.57■□□□□ 0.24
SRGAP3-210ENST00000491467 CCDC7Q96M83 1385 aa16.57■□□□□ 0.24
SRGAP3-210ENST00000491467 YTHDC1Q96MU7 727 aaKnown RBP16.57■□□□□ 0.24
SRGAP3-210ENST00000491467 UTRNP46939 3433 aa16.57■□□□□ 0.24
SRGAP3-210ENST00000491467 MYOM2P54296 1465 aa16.56■□□□□ 0.24
SRGAP3-210ENST00000491467 RIMS2Q9UQ26 1411 aa16.56■□□□□ 0.24
SRGAP3-210ENST00000491467 PIK3R4Q99570 1358 aa16.56■□□□□ 0.24
SRGAP3-210ENST00000491467 WASHC2AQ641Q2 1341 aa16.56■□□□□ 0.24
SRGAP3-210ENST00000491467 TRPM2O94759 1503 aa16.55■□□□□ 0.24
SRGAP3-210ENST00000491467 ZFYVE9O95405 1425 aa16.55■□□□□ 0.24
SRGAP3-210ENST00000491467 ONECUT3O60422 494 aaPredicted RBP16.53■□□□□ 0.24
SRGAP3-210ENST00000491467 NBPF14Q5TI25 921 aa16.53■□□□□ 0.24
SRGAP3-210ENST00000491467 ADAMTS13Q76LX8 1427 aa16.53■□□□□ 0.24
SRGAP3-210ENST00000491467 USP47Q96K76 1375 aa16.52■□□□□ 0.24
SRGAP3-210ENST00000491467 KIF1BO60333 1816 aa16.52■□□□□ 0.24
SRGAP3-210ENST00000491467 SLIT2O94813 1529 aa16.52■□□□□ 0.24
SRGAP3-210ENST00000491467 FAM182BQ5T319 152 aa16.52■□□□□ 0.24
SRGAP3-210ENST00000491467 DCAF11Q8TEB1 546 aa16.52■□□□□ 0.24
SRGAP3-210ENST00000491467 DISP2A7MBM2 1401 aa16.52■□□□□ 0.23
SRGAP3-210ENST00000491467 PTPRUQ92729 1446 aa16.52■□□□□ 0.23
SRGAP3-210ENST00000491467 LMTK2Q8IWU2 1503 aa16.51■□□□□ 0.23
SRGAP3-210ENST00000491467 CAMKK2Q96RR4 588 aa16.51■□□□□ 0.23
SRGAP3-210ENST00000491467 ORAI2Q96SN7 254 aa16.5■□□□□ 0.23
SRGAP3-210ENST00000491467 PRAG1Q86YV5 1406 aa16.5■□□□□ 0.23
SRGAP3-210ENST00000491467 NALCNQ8IZF0 1738 aa16.5■□□□□ 0.23
SRGAP3-210ENST00000491467 ROCK2O75116 1388 aaKnown RBP16.5■□□□□ 0.23
SRGAP3-210ENST00000491467 C1orf167Q5SNV9 1468 aa16.49■□□□□ 0.23
SRGAP3-210ENST00000491467 VPS72Q15906 364 aa16.49■□□□□ 0.23
SRGAP3-210ENST00000491467 SLC52A1Q9NWF4 448 aa16.49■□□□□ 0.23
SRGAP3-210ENST00000491467 PCDH10Q9P2E7 1040 aa16.49■□□□□ 0.23
SRGAP3-210ENST00000491467 NUP188Q5SRE5 1749 aa16.48■□□□□ 0.23
SRGAP3-210ENST00000491467 ADGRL3Q9HAR2 1447 aa16.48■□□□□ 0.23
SRGAP3-210ENST00000491467 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.48■□□□□ 0.23
SRGAP3-210ENST00000491467 CARD11Q9BXL7 1154 aa16.48■□□□□ 0.23
SRGAP3-210ENST00000491467 GPRASP1Q5JY77 1395 aa16.48■□□□□ 0.23
SRGAP3-210ENST00000491467 KIAA1210Q9ULL0 1709 aa16.48■□□□□ 0.23
SRGAP3-210ENST00000491467 ADGRB2O60241 1585 aa16.47■□□□□ 0.23
SRGAP3-210ENST00000491467 RREB1Q92766 1687 aa16.47■□□□□ 0.23
SRGAP3-210ENST00000491467 KDM2AQ9Y2K7 1162 aa16.46■□□□□ 0.23
SRGAP3-210ENST00000491467 KIF7Q2M1P5 1343 aa16.45■□□□□ 0.22
SRGAP3-210ENST00000491467 XRN1Q8IZH2 1706 aaKnown RBP16.45■□□□□ 0.22
SRGAP3-210ENST00000491467 ZNF326Q5BKZ1 582 aaKnown RBP16.45■□□□□ 0.22
SRGAP3-210ENST00000491467 GTF3C3Q9Y5Q9 886 aa16.45■□□□□ 0.22
SRGAP3-210ENST00000491467 NRKQ7Z2Y5 1582 aa16.45■□□□□ 0.22
SRGAP3-210ENST00000491467 CLTCL1P53675 1640 aa16.45■□□□□ 0.22
SRGAP3-210ENST00000491467 NOS1P29475 1434 aa16.45■□□□□ 0.22
SRGAP3-210ENST00000491467 C11orf95C9JLR9 678 aaPredicted RBP16.44■□□□□ 0.22
SRGAP3-210ENST00000491467 APBA3O96018 575 aa16.44■□□□□ 0.22
SRGAP3-210ENST00000491467 PLCH1Q4KWH8 1693 aa16.43■□□□□ 0.22
SRGAP3-210ENST00000491467 CHGAP10645 457 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms