RNA–Protein interactions for RNA: ENST00000484552.5

CAST-210, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-210ENST00000484552 KDM4CQ9H3R0 1056 aa10.37□□□□□ -0.75
CAST-210ENST00000484552 GEMIN8Q9NWZ8 242 aaKnown RBP10.37□□□□□ -0.75
CAST-210ENST00000484552 RBM47A0AV96 593 aaKnown RBP10.36□□□□□ -0.75
CAST-210ENST00000484552 COMMD10Q9Y6G5 202 aa10.36□□□□□ -0.75
CAST-210ENST00000484552 AQRO60306 1485 aaKnown RBP eCLIP10.36□□□□□ -0.753e-6■■■■□ 24.7
CAST-210ENST00000484552 COPB2P35606 906 aa10.35□□□□□ -0.75
CAST-210ENST00000484552 DNAJC14Q6Y2X3 702 aaPredicted RBP10.35□□□□□ -0.75
CAST-210ENST00000484552 CREBRFQ8IUR6 639 aa10.35□□□□□ -0.75
CAST-210ENST00000484552 ZNF513Q8N8E2 541 aaPredicted RBP10.35□□□□□ -0.75
CAST-210ENST00000484552 UBXN4Q92575 508 aa10.35□□□□□ -0.75
CAST-210ENST00000484552 PMM1Q92871 262 aa10.35□□□□□ -0.75
CAST-210ENST00000484552 CDCA7Q9BWT1 371 aaPredicted RBP10.35□□□□□ -0.75
CAST-210ENST00000484552 KLHL42Q9P2K6 505 aa10.35□□□□□ -0.75
CAST-210ENST00000484552 SLC20A2Q08357 652 aa10.34□□□□□ -0.75
CAST-210ENST00000484552 KCNV2Q8TDN2 545 aa10.34□□□□□ -0.75
CAST-210ENST00000484552 SPOCK3Q9BQ16 436 aa10.34□□□□□ -0.75
CAST-210ENST00000484552 CCDC194A0A1B0GVG4 234 aa10.34□□□□□ -0.75
CAST-210ENST00000484552 PUS10Q3MIT2 529 aaKnown RBP10.34□□□□□ -0.75
CAST-210ENST00000484552 C8orf37Q96NL8 207 aa10.34□□□□□ -0.75
CAST-210ENST00000484552 RBM19Q9Y4C8 960 aaKnown RBP10.34□□□□□ -0.75
CAST-210ENST00000484552 RAD54L2Q9Y4B4 1467 aa10.33□□□□□ -0.76
CAST-210ENST00000484552 ARHGEF11O15085 1522 aa10.33□□□□□ -0.76
CAST-210ENST00000484552 AMOTL1Q8IY63 956 aa10.33□□□□□ -0.76
CAST-210ENST00000484552 ATL2Q8NHH9 583 aa10.33□□□□□ -0.76
CAST-210ENST00000484552 SOGA1O94964 1423 aa10.33□□□□□ -0.76
CAST-210ENST00000484552 ERBB3P21860 1342 aa10.33□□□□□ -0.76
CAST-210ENST00000484552 FGD5Q6ZNL6 1462 aa10.33□□□□□ -0.76
CAST-210ENST00000484552 WDR97A6NE52 1622 aa10.33□□□□□ -0.76
CAST-210ENST00000484552 RIMBP3CA6NJZ7 1639 aa10.33□□□□□ -0.76
CAST-210ENST00000484552 RIMBP3BA6NNM3 1639 aa10.33□□□□□ -0.76
CAST-210ENST00000484552 RIMBP3Q9UFD9 1639 aa10.33□□□□□ -0.76
CAST-210ENST00000484552 CUX1P39880 1505 aa10.32□□□□□ -0.76
CAST-210ENST00000484552 ZRSR2Q15696 482 aaKnown RBP10.32□□□□□ -0.76
CAST-210ENST00000484552 UTP14CQ5TAP6 766 aaKnown RBP10.32□□□□□ -0.76
CAST-210ENST00000484552 SMAP1Q8IYB5 467 aaPredicted RBP10.32□□□□□ -0.76
CAST-210ENST00000484552 PDCL3Q9H2J4 239 aa10.32□□□□□ -0.76
CAST-210ENST00000484552 ZCRB1Q8TBF4 217 aaKnown RBP10.31□□□□□ -0.76
CAST-210ENST00000484552 PPP1R1BQ9UD71 204 aaPredicted RBP10.31□□□□□ -0.76
CAST-210ENST00000484552 TDRD9Q8NDG6 1382 aaKnown RBP10.3□□□□□ -0.76
CAST-210ENST00000484552 STK10O94804 968 aaKnown RBP10.3□□□□□ -0.76
CAST-210ENST00000484552 PARNO95453 639 aaKnown RBP10.3□□□□□ -0.76
CAST-210ENST00000484552 BDNFP23560 247 aa10.3□□□□□ -0.76
CAST-210ENST00000484552 SPOCK2Q92563 424 aa10.3□□□□□ -0.76
CAST-210ENST00000484552 MRRFQ96E11 262 aaKnown RBP10.3□□□□□ -0.76
CAST-210ENST00000484552 U2SURPO15042 1029 aaKnown RBP10.29□□□□□ -0.76
CAST-210ENST00000484552 GYS2P54840 703 aa10.29□□□□□ -0.76
CAST-210ENST00000484552 VTI1AQ96AJ9 217 aa10.29□□□□□ -0.76
CAST-210ENST00000484552 GNL3LQ9NVN8 582 aaKnown RBP10.29□□□□□ -0.76
CAST-210ENST00000484552 MRVI1Q9Y6F6 885 aa10.29□□□□□ -0.76
CAST-210ENST00000484552 VGLL3A8MV65 326 aa10.29□□□□□ -0.76
CAST-210ENST00000484552 SATB1Q01826 763 aa10.29□□□□□ -0.76
CAST-210ENST00000484552 RGL3Q3MIN7 710 aa10.29□□□□□ -0.76
CAST-210ENST00000484552 RBM46Q8TBY0 533 aaKnown RBP10.29□□□□□ -0.76
CAST-210ENST00000484552 RBM28Q9NW13 759 aaKnown RBP10.29□□□□□ -0.76
CAST-210ENST00000484552 SYNPO2Q9UMS6 1093 aa10.29□□□□□ -0.76
CAST-210ENST00000484552 CHD1O14646 1710 aa10.28□□□□□ -0.76
CAST-210ENST00000484552 UVSSAQ2YD98 709 aa10.28□□□□□ -0.76
CAST-210ENST00000484552 SND1Q7KZF4 910 aaKnown RBP eCLIP10.28□□□□□ -0.76
CAST-210ENST00000484552 PNISRQ8TF01 805 aaKnown RBP10.28□□□□□ -0.76
CAST-210ENST00000484552 TPX2Q9ULW0 747 aaKnown RBP10.28□□□□□ -0.76
CAST-210ENST00000484552 SUPT16HQ9Y5B9 1047 aaKnown RBP10.28□□□□□ -0.76
CAST-210ENST00000484552 GTPBP6O43824 516 aaPredicted RBP10.27□□□□□ -0.77
CAST-210ENST00000484552 WDHD1O75717 1129 aaPredicted RBP10.27□□□□□ -0.77
CAST-210ENST00000484552 C4orf46Q504U0 113 aa10.27□□□□□ -0.77
CAST-210ENST00000484552 GPATCH3Q96I76 525 aa10.27□□□□□ -0.77
CAST-210ENST00000484552 IRF2BPLQ9H1B7 796 aa10.27□□□□□ -0.77
CAST-210ENST00000484552 WASHC2CQ9Y4E1 1318 aa10.27□□□□□ -0.77
CAST-210ENST00000484552 SNAPC4Q5SXM2 1469 aa10.27□□□□□ -0.77
CAST-210ENST00000484552 FAM200BP0CF97 657 aa10.26□□□□□ -0.77
CAST-210ENST00000484552 PPP4CP60510 307 aa10.26□□□□□ -0.77
CAST-210ENST00000484552 SENP7Q9BQF6 1050 aa10.26□□□□□ -0.77
CAST-210ENST00000484552 MAGI1Q96QZ7 1491 aaPredicted RBP10.26□□□□□ -0.77
CAST-210ENST00000484552 GRIN2BQ13224 1484 aa10.26□□□□□ -0.77
CAST-210ENST00000484552 AKT1S1Q96B36 256 aa10.26□□□□□ -0.77
CAST-210ENST00000484552 FBXO9Q9UK97 447 aaPredicted RBP10.25□□□□□ -0.77
CAST-210ENST00000484552 CIZ1Q9ULV3 898 aaPredicted RBP10.25□□□□□ -0.77
CAST-210ENST00000484552 FAN1Q9Y2M0 1017 aa10.25□□□□□ -0.77
CAST-210ENST00000484552 NKX1-1Q15270 411 aaPredicted RBP10.24□□□□□ -0.77
CAST-210ENST00000484552 C11orf96Q7Z7L8 435 aa10.24□□□□□ -0.77
CAST-210ENST00000484552 PROM2Q8N271 834 aa10.24□□□□□ -0.77
CAST-210ENST00000484552 NGEFQ8N5V2 710 aa10.24□□□□□ -0.77
CAST-210ENST00000484552 ABCF2Q9UG63 623 aa10.24□□□□□ -0.77
CAST-210ENST00000484552 NEXNQ0ZGT2 675 aa10.24□□□□□ -0.77
CAST-210ENST00000484552 PROCA1Q8NCQ7 364 aaPredicted RBP10.24□□□□□ -0.77
CAST-210ENST00000484552 SWAP70Q9UH65 585 aa10.24□□□□□ -0.77
CAST-210ENST00000484552 ARAP1Q96P48 1450 aa10.23□□□□□ -0.77
CAST-210ENST00000484552 CFAP69A5D8W1 941 aa10.23□□□□□ -0.77
CAST-210ENST00000484552 HAX1O00165 279 aa10.23□□□□□ -0.77
CAST-210ENST00000484552 RPAINQ86UA6 219 aa10.23□□□□□ -0.77
CAST-210ENST00000484552 PROSER2Q86WR7 435 aaPredicted RBP10.23□□□□□ -0.77
CAST-210ENST00000484552 NRBP1Q9UHY1 535 aa10.23□□□□□ -0.77
CAST-210ENST00000484552 WWC3Q9ULE0 1092 aa10.23□□□□□ -0.77
CAST-210ENST00000484552 CLASP1Q7Z460 1538 aa10.23□□□□□ -0.77
CAST-210ENST00000484552 ABCA10Q8WWZ4 1543 aa10.23□□□□□ -0.77
CAST-210ENST00000484552 SYNJ2O15056 1496 aa10.23□□□□□ -0.77
CAST-210ENST00000484552 SBNO2Q9Y2G9 1366 aa10.22□□□□□ -0.77
CAST-210ENST00000484552 SYNRGQ9UMZ2 1314 aa10.22□□□□□ -0.77
CAST-210ENST00000484552 POLA2Q14181 598 aa10.22□□□□□ -0.77
CAST-210ENST00000484552 DNTTIP2Q5QJE6 756 aaKnown RBP10.22□□□□□ -0.77
CAST-210ENST00000484552 AK7Q96M32 723 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms