RNA–Protein interactions for RNA: ENST00000480321.1

MCF2L-225, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 5,727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-225ENST00000480321 MBD3O95983 291 aa16.5■□□□□ 0.23
MCF2L-225ENST00000480321 NCOA2Q15596 1464 aa16.5■□□□□ 0.23
MCF2L-225ENST00000480321 CPLX1O14810 134 aa16.49■□□□□ 0.23
MCF2L-225ENST00000480321 OSCARQ8IYS5 282 aa16.49■□□□□ 0.23
MCF2L-225ENST00000480321 PDE3AQ14432 1141 aa16.49■□□□□ 0.23
MCF2L-225ENST00000480321 G3BP1Q13283 466 aaKnown RBP eCLIP16.49■□□□□ 0.23
MCF2L-225ENST00000480321 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.49■□□□□ 0.23
MCF2L-225ENST00000480321 CTDP1Q9Y5B0 961 aaPredicted RBP16.49■□□□□ 0.23
MCF2L-225ENST00000480321 ACBD3Q9H3P7 528 aa16.48■□□□□ 0.23
MCF2L-225ENST00000480321 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.48■□□□□ 0.23
MCF2L-225ENST00000480321 CCDC73Q6ZRK6 1079 aa16.48■□□□□ 0.23
MCF2L-225ENST00000480321 TCEAL9Q9UHQ7 104 aa16.48■□□□□ 0.23
MCF2L-225ENST00000480321 VPS37DQ86XT2 251 aa16.48■□□□□ 0.23
MCF2L-225ENST00000480321 TRDNQ13061 729 aa16.48■□□□□ 0.23
MCF2L-225ENST00000480321 NASPP49321 788 aaPredicted RBP16.47■□□□□ 0.23
MCF2L-225ENST00000480321 FOXD4L6Q3SYB3 417 aaPredicted RBP16.47■□□□□ 0.23
MCF2L-225ENST00000480321 FOXD4L3Q6VB84 417 aaPredicted RBP16.47■□□□□ 0.23
MCF2L-225ENST00000480321 ZNF592Q92610 1267 aa16.47■□□□□ 0.23
MCF2L-225ENST00000480321 APPP05067 770 aa16.47■□□□□ 0.23
MCF2L-225ENST00000480321 NAT10Q9H0A0 1025 aaKnown RBP16.47■□□□□ 0.23
MCF2L-225ENST00000480321 HOMER1Q86YM7 354 aa16.46■□□□□ 0.23
MCF2L-225ENST00000480321 FAM13BQ9NYF5 915 aa16.46■□□□□ 0.23
MCF2L-225ENST00000480321 HFM1A2PYH4 1435 aa16.46■□□□□ 0.23
MCF2L-225ENST00000480321 CT47B1P0C2W7 299 aaPredicted RBP16.46■□□□□ 0.22
MCF2L-225ENST00000480321 PSMA5P28066 241 aa16.46■□□□□ 0.22
MCF2L-225ENST00000480321 FKBP5Q13451 457 aaPredicted RBP16.46■□□□□ 0.22
MCF2L-225ENST00000480321 LNPKQ9C0E8 428 aa16.46■□□□□ 0.22
MCF2L-225ENST00000480321 KLHL34Q8N239 644 aa16.45■□□□□ 0.22
MCF2L-225ENST00000480321 FBXW7Q969H0 707 aa16.45■□□□□ 0.22
MCF2L-225ENST00000480321 SMG6Q86US8 1419 aaKnown RBP16.44■□□□□ 0.22
MCF2L-225ENST00000480321 EFCAB5A4FU69 1503 aa16.44■□□□□ 0.22
MCF2L-225ENST00000480321 DHX8Q14562 1220 aaKnown RBP16.44■□□□□ 0.22
MCF2L-225ENST00000480321 RABEP1Q15276 862 aa16.44■□□□□ 0.22
MCF2L-225ENST00000480321 GCC1Q96CN9 775 aa16.44■□□□□ 0.22
MCF2L-225ENST00000480321 VPS37CA5D8V6 355 aaPredicted RBP16.44■□□□□ 0.22
MCF2L-225ENST00000480321 TRAK2O60296 914 aa16.44■□□□□ 0.22
MCF2L-225ENST00000480321 DHX16O60231 1041 aaKnown RBP16.44■□□□□ 0.22
MCF2L-225ENST00000480321 CCDC173Q0VFZ6 552 aa16.44■□□□□ 0.22
MCF2L-225ENST00000480321 PATL2C9JE40 543 aaKnown RBP16.43■□□□□ 0.22
MCF2L-225ENST00000480321 FAM69CQ0P6D2 419 aa16.43■□□□□ 0.22
MCF2L-225ENST00000480321 PANK1Q8TE04 598 aa16.43■□□□□ 0.22
MCF2L-225ENST00000480321 SAFBQ15424 915 aaKnown RBP eCLIP16.42■□□□□ 0.22
MCF2L-225ENST00000480321 RAPGEF4Q8WZA2 1011 aa16.42■□□□□ 0.22
MCF2L-225ENST00000480321 TSPYL4Q9UJ04 414 aa16.42■□□□□ 0.22
MCF2L-225ENST00000480321 ADAMTS8Q9UP79 889 aa16.42■□□□□ 0.22
MCF2L-225ENST00000480321 GNAI3P08754 354 aa16.42■□□□□ 0.22
MCF2L-225ENST00000480321 ATF3P18847 181 aa16.42■□□□□ 0.22
MCF2L-225ENST00000480321 CDR1P51861 262 aa16.42■□□□□ 0.22
MCF2L-225ENST00000480321 MNS1Q8NEH6 495 aa16.42■□□□□ 0.22
MCF2L-225ENST00000480321 CWC22Q9HCG8 908 aaKnown RBP16.41■□□□□ 0.22
MCF2L-225ENST00000480321 EHBP1L1Q8N3D4 1523 aa16.41■□□□□ 0.22
MCF2L-225ENST00000480321 IFT57Q9NWB7 429 aa16.41■□□□□ 0.22
MCF2L-225ENST00000480321 HMGN5P82970 282 aaKnown RBP16.41■□□□□ 0.22
MCF2L-225ENST00000480321 NOM1Q5C9Z4 860 aaKnown RBP16.41■□□□□ 0.22
MCF2L-225ENST00000480321 CNTROBQ8N137 903 aa16.41■□□□□ 0.22
MCF2L-225ENST00000480321 HIP1O00291 1037 aa16.41■□□□□ 0.22
MCF2L-225ENST00000480321 CCP110O43303 1012 aa16.41■□□□□ 0.22
MCF2L-225ENST00000480321 ERICH2A1L162 156 aa16.4■□□□□ 0.22
MCF2L-225ENST00000480321 PDCP20941 246 aa16.4■□□□□ 0.22
MCF2L-225ENST00000480321 AK7Q96M32 723 aa16.4■□□□□ 0.22
MCF2L-225ENST00000480321 PPP2R1AP30153 589 aa16.4■□□□□ 0.22
MCF2L-225ENST00000480321 AEBP2Q6ZN18 517 aaPredicted RBP16.4■□□□□ 0.22
MCF2L-225ENST00000480321 PCMTD1Q96MG8 357 aaPredicted RBP16.39■□□□□ 0.21
MCF2L-225ENST00000480321 NFXL1Q6ZNB6 911 aa16.38■□□□□ 0.21
MCF2L-225ENST00000480321 UBTFL1P0CB47 393 aaPredicted RBP16.38■□□□□ 0.21
MCF2L-225ENST00000480321 OLFM4Q6UX06 510 aa16.38■□□□□ 0.21
MCF2L-225ENST00000480321 TSPY26PQ9H489 355 aa16.38■□□□□ 0.21
MCF2L-225ENST00000480321 PHF23Q9BUL5 403 aaPredicted RBP16.38■□□□□ 0.21
MCF2L-225ENST00000480321 BACH2Q9BYV9 841 aa16.38■□□□□ 0.21
MCF2L-225ENST00000480321 HMOX1P09601 288 aa16.37■□□□□ 0.21
MCF2L-225ENST00000480321 RBM33Q96EV2 1170 aaKnown RBP16.37■□□□□ 0.21
MCF2L-225ENST00000480321 KIAA1107Q9UPP5 1409 aa16.37■□□□□ 0.21
MCF2L-225ENST00000480321 PDZRN3Q9UPQ7 1066 aa16.37■□□□□ 0.21
MCF2L-225ENST00000480321 TCP11L2Q8N4U5 519 aa16.37■□□□□ 0.21
MCF2L-225ENST00000480321 ERCC4Q92889 916 aaPredicted RBP16.37■□□□□ 0.21
MCF2L-225ENST00000480321 HSP90B2PQ58FF3 399 aa16.36■□□□□ 0.21
MCF2L-225ENST00000480321 NLRP2Q9NX02 1062 aa16.36■□□□□ 0.21
MCF2L-225ENST00000480321 RIC3Q7Z5B4 369 aa16.36■□□□□ 0.21
MCF2L-225ENST00000480321 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.36■□□□□ 0.21
MCF2L-225ENST00000480321 RALYLQ86SE5 291 aaKnown RBP16.36■□□□□ 0.21
MCF2L-225ENST00000480321 RUFY1Q96T51 708 aa16.36■□□□□ 0.21
MCF2L-225ENST00000480321 PRDM2Q13029 1718 aa16.36■□□□□ 0.21
MCF2L-225ENST00000480321 WDR63Q8IWG1 891 aa16.36■□□□□ 0.21
MCF2L-225ENST00000480321 CALRP27797 417 aaKnown RBP16.35■□□□□ 0.21
MCF2L-225ENST00000480321 CIZ1Q9ULV3 898 aaPredicted RBP16.35■□□□□ 0.21
MCF2L-225ENST00000480321 R3HCC1Q9Y3T6 440 aaKnown RBP16.35■□□□□ 0.21
MCF2L-225ENST00000480321 CCDC30Q5VVM6 783 aa16.35■□□□□ 0.21
MCF2L-225ENST00000480321 NUTM2GQ5VZR2 741 aa16.34■□□□□ 0.21
MCF2L-225ENST00000480321 AIMP1Q12904 312 aaKnown RBP16.34■□□□□ 0.21
MCF2L-225ENST00000480321 ERC1Q8IUD2 1116 aa16.34■□□□□ 0.21
MCF2L-225ENST00000480321 CWC15Q9P013 229 aaKnown RBP16.34■□□□□ 0.21
MCF2L-225ENST00000480321 BRMS1Q9HCU9 246 aa16.34■□□□□ 0.21
MCF2L-225ENST00000480321 PLEKHH2Q8IVE3 1493 aa16.34■□□□□ 0.21
MCF2L-225ENST00000480321 XBP1P17861 261 aa16.34■□□□□ 0.21
MCF2L-225ENST00000480321 SAMD1Q6SPF0 538 aaPredicted RBP16.34■□□□□ 0.21
MCF2L-225ENST00000480321 GAS2L2Q8NHY3 880 aa16.34■□□□□ 0.21
MCF2L-225ENST00000480321 GGNBP2Q9H3C7 697 aa16.34■□□□□ 0.21
MCF2L-225ENST00000480321 MTHFSP49914 203 aa16.33■□□□□ 0.2
MCF2L-225ENST00000480321 NEUROD6Q96NK8 337 aa16.33■□□□□ 0.2
MCF2L-225ENST00000480321 ARAP1Q96P48 1450 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms