RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 TREML4Q6UXN2 200 aa7.61□□□□□ -1.19
SF3B6-202ENST00000478050 RUSC2Q8N2Y8 1516 aa7.61□□□□□ -1.19
SF3B6-202ENST00000478050 FANCD2Q9BXW9 1451 aa7.61□□□□□ -1.19
SF3B6-202ENST00000478050 PAXIP1Q6ZW49 1069 aaPredicted RBP7.6□□□□□ -1.19
SF3B6-202ENST00000478050 RBM46Q8TBY0 533 aaKnown RBP7.6□□□□□ -1.19
SF3B6-202ENST00000478050 CFAP44Q96MT7 982 aa7.6□□□□□ -1.19
SF3B6-202ENST00000478050 ST8SIA5O15466 376 aa7.59□□□□□ -1.19
SF3B6-202ENST00000478050 ACTN4O43707 911 aaKnown RBP7.59□□□□□ -1.19
SF3B6-202ENST00000478050 GDF9O60383 454 aa7.59□□□□□ -1.19
SF3B6-202ENST00000478050 PRKCSHP14314 528 aaPredicted RBP7.59□□□□□ -1.19
SF3B6-202ENST00000478050 NR1I2O75469 434 aa7.58□□□□□ -1.2
SF3B6-202ENST00000478050 ADH1BP00325 375 aa7.58□□□□□ -1.2
SF3B6-202ENST00000478050 CHD1O14646 1710 aa7.58□□□□□ -1.2
SF3B6-202ENST00000478050 ZNF608Q9ULD9 1512 aaPredicted RBP7.57□□□□□ -1.2
SF3B6-202ENST00000478050 SYNJ2O15056 1496 aa7.57□□□□□ -1.2
SF3B6-202ENST00000478050 IFT140Q96RY7 1462 aa7.57□□□□□ -1.2
SF3B6-202ENST00000478050 CFHP08603 1231 aa7.57□□□□□ -1.2
SF3B6-202ENST00000478050 FOXC1Q12948 553 aa7.57□□□□□ -1.2
SF3B6-202ENST00000478050 SLC6A16Q9GZN6 736 aa7.57□□□□□ -1.2
SF3B6-202ENST00000478050 AAASQ9NRG9 546 aa7.57□□□□□ -1.2
SF3B6-202ENST00000478050 TMEM134Q9H6X4 195 aa7.56□□□□□ -1.2
SF3B6-202ENST00000478050 URB2Q14146 1524 aaKnown RBP7.54□□□□□ -1.2
SF3B6-202ENST00000478050 UBTFP17480 764 aaKnown RBP7.54□□□□□ -1.2
SF3B6-202ENST00000478050 LMOD2Q6P5Q4 547 aa7.54□□□□□ -1.2
SF3B6-202ENST00000478050 ERICH3Q5RHP9 1530 aa7.53□□□□□ -1.2
SF3B6-202ENST00000478050 RCCD1A6NED2 376 aa7.53□□□□□ -1.2
SF3B6-202ENST00000478050 KDM2AQ9Y2K7 1162 aa7.53□□□□□ -1.2
SF3B6-202ENST00000478050 GAPVD1Q14C86 1478 aa7.52□□□□□ -1.21
SF3B6-202ENST00000478050 WFS1O76024 890 aa7.52□□□□□ -1.21
SF3B6-202ENST00000478050 RSPH4AQ5TD94 716 aa7.52□□□□□ -1.21
SF3B6-202ENST00000478050 ADGRG1Q9Y653 693 aa7.52□□□□□ -1.21
SF3B6-202ENST00000478050 C11orf95C9JLR9 678 aaPredicted RBP7.51□□□□□ -1.21
SF3B6-202ENST00000478050 PLA2G2CQ5R387 149 aa7.51□□□□□ -1.21
SF3B6-202ENST00000478050 SCUBE3Q8IX30 993 aa7.51□□□□□ -1.21
SF3B6-202ENST00000478050 PKD2L1Q9P0L9 805 aa7.51□□□□□ -1.21
SF3B6-202ENST00000478050 CLIP1P30622 1438 aa7.51□□□□□ -1.21
SF3B6-202ENST00000478050 EIF4G3O43432 1585 aaKnown RBP7.5□□□□□ -1.21
SF3B6-202ENST00000478050 ADGRL1O94910 1474 aa7.5□□□□□ -1.21
SF3B6-202ENST00000478050 CFTRP13569 1480 aa7.5□□□□□ -1.21
SF3B6-202ENST00000478050 KDM6BO15054 1643 aa7.5□□□□□ -1.21
SF3B6-202ENST00000478050 AXIN1O15169 862 aa7.5□□□□□ -1.21
SF3B6-202ENST00000478050 CD2BP2O95400 341 aaKnown RBP7.5□□□□□ -1.21
SF3B6-202ENST00000478050 PTGDRQ13258 359 aa7.5□□□□□ -1.21
SF3B6-202ENST00000478050 LCE2AQ5TA79 106 aaPredicted RBP7.5□□□□□ -1.21
SF3B6-202ENST00000478050 CYP4X1Q8N118 509 aa7.5□□□□□ -1.21
SF3B6-202ENST00000478050 SPSB2Q99619 263 aa7.5□□□□□ -1.21
SF3B6-202ENST00000478050 RAPGEF2Q9Y4G8 1499 aa7.49□□□□□ -1.21
SF3B6-202ENST00000478050 CUX1P39880 1505 aa7.49□□□□□ -1.21
SF3B6-202ENST00000478050 NUTM2FA1L443 756 aa7.49□□□□□ -1.21
SF3B6-202ENST00000478050 SLC10A3P09131 477 aa7.49□□□□□ -1.21
SF3B6-202ENST00000478050 FAM161AQ3B820 660 aa7.49□□□□□ -1.21
SF3B6-202ENST00000478050 VPS8Q8N3P4 1428 aa7.49□□□□□ -1.21
SF3B6-202ENST00000478050 MLLT3P42568 568 aaPredicted RBP7.48□□□□□ -1.21
SF3B6-202ENST00000478050 RPIAP49247 311 aa7.48□□□□□ -1.21
SF3B6-202ENST00000478050 TPRNQ4KMQ1 711 aa7.48□□□□□ -1.21
SF3B6-202ENST00000478050 SPATA31D1Q6ZQQ2 1576 aa7.48□□□□□ -1.21
SF3B6-202ENST00000478050 CRIPAKQ8N1N5 446 aa7.48□□□□□ -1.21
SF3B6-202ENST00000478050 GMPR2Q9P2T1 348 aaKnown RBP7.48□□□□□ -1.21
SF3B6-202ENST00000478050 STK17AQ9UEE5 414 aa7.48□□□□□ -1.21
SF3B6-202ENST00000478050 DACH1Q9UI36 760 aa7.48□□□□□ -1.21
SF3B6-202ENST00000478050 CLASP1Q7Z460 1538 aa7.47□□□□□ -1.21
SF3B6-202ENST00000478050 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.47□□□□□ -1.21
SF3B6-202ENST00000478050 FAM69CQ0P6D2 419 aa7.47□□□□□ -1.21
SF3B6-202ENST00000478050 PUS10Q3MIT2 529 aaKnown RBP7.47□□□□□ -1.21
SF3B6-202ENST00000478050 PRXQ9BXM0 1461 aa7.47□□□□□ -1.21
SF3B6-202ENST00000478050 KIF13AQ9H1H9 1805 aa7.46□□□□□ -1.21
SF3B6-202ENST00000478050 INSM1Q01101 510 aaPredicted RBP7.46□□□□□ -1.22
SF3B6-202ENST00000478050 CTC1Q2NKJ3 1217 aa7.46□□□□□ -1.22
SF3B6-202ENST00000478050 CCER1Q8TC90 406 aaPredicted RBP7.46□□□□□ -1.22
SF3B6-202ENST00000478050 KIF27Q86VH2 1401 aa7.45□□□□□ -1.22
SF3B6-202ENST00000478050 TTC24A2A3L6 582 aaPredicted RBP7.45□□□□□ -1.22
SF3B6-202ENST00000478050 AVPP01185 164 aa7.45□□□□□ -1.22
SF3B6-202ENST00000478050 CHMP7Q8WUX9 453 aaPredicted RBP7.45□□□□□ -1.22
SF3B6-202ENST00000478050 ARHGEF1Q92888 912 aaKnown RBP7.45□□□□□ -1.22
SF3B6-202ENST00000478050 TSHZ2Q9NRE2 1034 aa7.45□□□□□ -1.22
SF3B6-202ENST00000478050 TOR4AQ9NXH8 423 aa7.45□□□□□ -1.22
SF3B6-202ENST00000478050 OATP04181 439 aa7.44□□□□□ -1.22
SF3B6-202ENST00000478050 FCF1Q9Y324 198 aaKnown RBP7.44□□□□□ -1.22
SF3B6-202ENST00000478050 AQRO60306 1485 aaKnown RBP eCLIP7.43□□□□□ -1.22
SF3B6-202ENST00000478050 ZBTB24O43167 697 aaPredicted RBP7.43□□□□□ -1.22
SF3B6-202ENST00000478050 FCHSD2O94868 740 aa7.43□□□□□ -1.22
SF3B6-202ENST00000478050 SMCPP49901 116 aaPredicted RBP7.41□□□□□ -1.22
SF3B6-202ENST00000478050 NFX1Q12986 1120 aaKnown RBP7.41□□□□□ -1.22
SF3B6-202ENST00000478050 WIPF1O43516 503 aa7.4□□□□□ -1.22
SF3B6-202ENST00000478050 FMNL1O95466 1100 aaPredicted RBP7.4□□□□□ -1.22
SF3B6-202ENST00000478050 RDH13Q8NBN7 331 aa7.4□□□□□ -1.22
SF3B6-202ENST00000478050 PXYLP1Q8TE99 480 aa7.4□□□□□ -1.22
SF3B6-202ENST00000478050 TTBK1Q5TCY1 1321 aaPredicted RBP7.4□□□□□ -1.22
SF3B6-202ENST00000478050 ABCC10Q5T3U5 1492 aa7.39□□□□□ -1.23
SF3B6-202ENST00000478050 MORN1Q5T089 497 aa7.38□□□□□ -1.23
SF3B6-202ENST00000478050 DNMBPQ6XZF7 1577 aa7.37□□□□□ -1.23
SF3B6-202ENST00000478050 ATP6V1AP38606 617 aa7.37□□□□□ -1.23
SF3B6-202ENST00000478050 SENP2Q9HC62 589 aa7.37□□□□□ -1.23
SF3B6-202ENST00000478050 ATP13A2Q9NQ11 1180 aa7.37□□□□□ -1.23
SF3B6-202ENST00000478050 FGD5Q6ZNL6 1462 aa7.36□□□□□ -1.23
SF3B6-202ENST00000478050 TERTO14746 1132 aaKnown RBP7.36□□□□□ -1.23
SF3B6-202ENST00000478050 FUT2Q10981 343 aa7.36□□□□□ -1.23
SF3B6-202ENST00000478050 FAM160A2Q8N612 972 aaPredicted RBP7.36□□□□□ -1.23
SF3B6-202ENST00000478050 SNIP1Q8TAD8 396 aaKnown RBP7.36□□□□□ -1.23
SF3B6-202ENST00000478050 TOPBP1Q92547 1522 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms