RNA–Protein interactions for RNA: ENST00000477876.1

NUP58-210, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-210ENST00000477876 SCUBE3Q8IX30 993 aa10.47□□□□□ -0.73
NUP58-210ENST00000477876 FAM217BQ9NTX9 383 aaPredicted RBP10.47□□□□□ -0.73
NUP58-210ENST00000477876 TARBP1Q13395 1621 aaKnown RBP10.47□□□□□ -0.73
NUP58-210ENST00000477876 REPIN1Q9BWE0 567 aaKnown RBP10.46□□□□□ -0.73
NUP58-210ENST00000477876 ARHGEF11O15085 1522 aa10.46□□□□□ -0.74
NUP58-210ENST00000477876 EIF4G3O43432 1585 aaKnown RBP10.46□□□□□ -0.74
NUP58-210ENST00000477876 DNMBPQ6XZF7 1577 aa10.46□□□□□ -0.74
NUP58-210ENST00000477876 RAD54L2Q9Y4B4 1467 aa10.45□□□□□ -0.74
NUP58-210ENST00000477876 TRIM66O15016 1216 aa10.45□□□□□ -0.74
NUP58-210ENST00000477876 PPP1R18Q6NYC8 613 aa10.45□□□□□ -0.74
NUP58-210ENST00000477876 POLA1P09884 1462 aaPredicted RBP10.44□□□□□ -0.74
NUP58-210ENST00000477876 TTLL12Q14166 644 aaPredicted RBP10.44□□□□□ -0.74
NUP58-210ENST00000477876 GRIPAP1Q4V328 841 aa10.44□□□□□ -0.74
NUP58-210ENST00000477876 MORN1Q5T089 497 aa10.44□□□□□ -0.74
NUP58-210ENST00000477876 CYB5RLQ6IPT4 315 aa10.44□□□□□ -0.74
NUP58-210ENST00000477876 SLC24A3Q9HC58 644 aa10.44□□□□□ -0.74
NUP58-210ENST00000477876 ABCC8Q09428 1581 aa10.43□□□□□ -0.74
NUP58-210ENST00000477876 SSTR3P32745 418 aaPredicted RBP10.43□□□□□ -0.74
NUP58-210ENST00000477876 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.43□□□□□ -0.74
NUP58-210ENST00000477876 TDRD9Q8NDG6 1382 aaKnown RBP10.42□□□□□ -0.74
NUP58-210ENST00000477876 KDM4AO75164 1064 aa10.42□□□□□ -0.74
NUP58-210ENST00000477876 GGCXP38435 758 aa10.42□□□□□ -0.74
NUP58-210ENST00000477876 Q6ZNB5 142 aa10.42□□□□□ -0.74
NUP58-210ENST00000477876 TLL1O43897 1013 aa10.41□□□□□ -0.74
NUP58-210ENST00000477876 CHD1O14646 1710 aa10.41□□□□□ -0.74
NUP58-210ENST00000477876 GIGYF2Q6Y7W6 1299 aaKnown RBP10.4□□□□□ -0.74
NUP58-210ENST00000477876 SLC27A5Q9Y2P5 690 aa10.4□□□□□ -0.74
NUP58-210ENST00000477876 SOGA1O94964 1423 aa10.4□□□□□ -0.75
NUP58-210ENST00000477876 ADH1BP00325 375 aa10.39□□□□□ -0.75
NUP58-210ENST00000477876 USP46P62068 366 aa10.39□□□□□ -0.75
NUP58-210ENST00000477876 ARAP1Q96P48 1450 aa10.38□□□□□ -0.75
NUP58-210ENST00000477876 PARP9Q8IXQ6 854 aa10.38□□□□□ -0.75
NUP58-210ENST00000477876 SPSB2Q99619 263 aa10.38□□□□□ -0.75
NUP58-210ENST00000477876 SALL2Q9Y467 1007 aaPredicted RBP10.38□□□□□ -0.75
NUP58-210ENST00000477876 PDE4DQ08499 809 aa10.37□□□□□ -0.75
NUP58-210ENST00000477876 NUTM1Q86Y26 1132 aa10.37□□□□□ -0.75
NUP58-210ENST00000477876 THAP11Q96EK4 314 aa10.37□□□□□ -0.75
NUP58-210ENST00000477876 CUX1P39880 1505 aa10.37□□□□□ -0.75
NUP58-210ENST00000477876 FGD5Q6ZNL6 1462 aa10.36□□□□□ -0.75
NUP58-210ENST00000477876 FMNL1O95466 1100 aaPredicted RBP10.36□□□□□ -0.75
NUP58-210ENST00000477876 S1PR4O95977 384 aa10.35□□□□□ -0.75
NUP58-210ENST00000477876 BRICD5Q6PL45 260 aa10.35□□□□□ -0.75
NUP58-210ENST00000477876 SLC6A16Q9GZN6 736 aa10.35□□□□□ -0.75
NUP58-210ENST00000477876 RNF223E7ERA6 249 aa10.34□□□□□ -0.75
NUP58-210ENST00000477876 HOXA2O43364 376 aa10.34□□□□□ -0.75
NUP58-210ENST00000477876 Q3C1V9 767 aa10.34□□□□□ -0.75
NUP58-210ENST00000477876 SNAPC4Q5SXM2 1469 aa10.34□□□□□ -0.75
NUP58-210ENST00000477876 SPIRE2Q8WWL2 714 aa10.32□□□□□ -0.76
NUP58-210ENST00000477876 BEGAINQ9BUH8 593 aa10.32□□□□□ -0.76
NUP58-210ENST00000477876 PPEF1O14829 653 aaPredicted RBP10.31□□□□□ -0.76
NUP58-210ENST00000477876 MS4A1P11836 297 aa10.31□□□□□ -0.76
NUP58-210ENST00000477876 RNF19BQ6ZMZ0 732 aa10.31□□□□□ -0.76
NUP58-210ENST00000477876 FAM160A2Q8N612 972 aaPredicted RBP10.31□□□□□ -0.76
NUP58-210ENST00000477876 ANKLE1Q8NAG6 615 aa10.31□□□□□ -0.76
NUP58-210ENST00000477876 HLA-CQ95604 372 aa10.31□□□□□ -0.76
NUP58-210ENST00000477876 PRKD2Q9BZL6 878 aa10.31□□□□□ -0.76
NUP58-210ENST00000477876 CLASP1Q7Z460 1538 aa10.31□□□□□ -0.76
NUP58-210ENST00000477876 CHMP7Q8WUX9 453 aaPredicted RBP10.3□□□□□ -0.76
NUP58-210ENST00000477876 V9GY48 417 aaPredicted RBP10.3□□□□□ -0.76
NUP58-210ENST00000477876 DIXDC1Q155Q3 683 aa10.28□□□□□ -0.76
NUP58-210ENST00000477876 GRIN2BQ13224 1484 aa10.28□□□□□ -0.76
NUP58-210ENST00000477876 SUPT5HO00267 1087 aaKnown RBP10.27□□□□□ -0.77
NUP58-210ENST00000477876 GUCA2AQ02747 115 aa10.27□□□□□ -0.77
NUP58-210ENST00000477876 MSS51Q4VC12 460 aa10.27□□□□□ -0.77
NUP58-210ENST00000477876 USB1Q9BQ65 265 aaKnown RBP10.27□□□□□ -0.77
NUP58-210ENST00000477876 WDR97A6NE52 1622 aa10.26□□□□□ -0.77
NUP58-210ENST00000477876 MAGI1Q96QZ7 1491 aaPredicted RBP10.26□□□□□ -0.77
NUP58-210ENST00000477876 FDX1P10109 184 aa10.26□□□□□ -0.77
NUP58-210ENST00000477876 TBC1D2Q9BYX2 928 aa10.26□□□□□ -0.77
NUP58-210ENST00000477876 SYNJ2O15056 1496 aa10.25□□□□□ -0.77
NUP58-210ENST00000477876 MOXD2PA6NHM9 499 aa10.25□□□□□ -0.77
NUP58-210ENST00000477876 NDUFV2P19404 249 aa10.25□□□□□ -0.77
NUP58-210ENST00000477876 GAPVD1Q14C86 1478 aa10.24□□□□□ -0.77
NUP58-210ENST00000477876 SLC19A1P41440 591 aa10.24□□□□□ -0.77
NUP58-210ENST00000477876 PCDHGC3Q9UN70 934 aa10.24□□□□□ -0.77
NUP58-210ENST00000477876 SYMPKQ92797 1274 aaKnown RBP10.23□□□□□ -0.77
NUP58-210ENST00000477876 PRDM9Q9NQV7 894 aa10.23□□□□□ -0.77
NUP58-210ENST00000477876 ABCA10Q8WWZ4 1543 aa10.23□□□□□ -0.77
NUP58-210ENST00000477876 SYNJ1O43426 1573 aa10.22□□□□□ -0.77
NUP58-210ENST00000477876 GJA5P36382 358 aa10.22□□□□□ -0.77
NUP58-210ENST00000477876 EMID1Q96A84 441 aaPredicted RBP10.22□□□□□ -0.77
NUP58-210ENST00000477876 ERCC6L2Q5T890 1561 aa10.22□□□□□ -0.77
NUP58-210ENST00000477876 MMP16P51512 607 aa10.21□□□□□ -0.77
NUP58-210ENST00000477876 PLA2G2CQ5R387 149 aa10.21□□□□□ -0.77
NUP58-210ENST00000477876 LIAT1Q6ZQX7 453 aa10.21□□□□□ -0.77
NUP58-210ENST00000477876 FCF1Q9Y324 198 aaKnown RBP10.21□□□□□ -0.77
NUP58-210ENST00000477876 ABCA5Q8WWZ7 1642 aa10.21□□□□□ -0.78
NUP58-210ENST00000477876 PBRM1Q86U86 1689 aa10.21□□□□□ -0.78
NUP58-210ENST00000477876 C6orf229H3BNL8 230 aa10.2□□□□□ -0.78
NUP58-210ENST00000477876 LCE2BO14633 110 aa10.2□□□□□ -0.78
NUP58-210ENST00000477876 RETREG3Q86VR2 466 aa10.2□□□□□ -0.78
NUP58-210ENST00000477876 SPTLC1O15269 473 aa10.19□□□□□ -0.78
NUP58-210ENST00000477876 DXOO77932 396 aaKnown RBP10.19□□□□□ -0.78
NUP58-210ENST00000477876 SPRYD7Q5W111 196 aa10.19□□□□□ -0.78
NUP58-210ENST00000477876 RSBN1LQ6PCB5 846 aaPredicted RBP10.19□□□□□ -0.78
NUP58-210ENST00000477876 RIC3Q7Z5B4 369 aa10.19□□□□□ -0.78
NUP58-210ENST00000477876 KDM4CQ9H3R0 1056 aa10.18□□□□□ -0.78
NUP58-210ENST00000477876 LAPTM4AQ15012 233 aa10.17□□□□□ -0.78
NUP58-210ENST00000477876 ZNF598Q86UK7 904 aaKnown RBP10.17□□□□□ -0.78
NUP58-210ENST00000477876 GPBP1L1Q9HC44 474 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms