RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 CLASP1Q7Z460 1538 aa10.43□□□□□ -0.74
GPNMB-209ENST00000474157 HDGFP51858 240 aaKnown RBP10.42□□□□□ -0.74
GPNMB-209ENST00000474157 LSM11P83369 360 aaKnown RBP eCLIP10.42□□□□□ -0.74
GPNMB-209ENST00000474157 RSPH4AQ5TD94 716 aa10.42□□□□□ -0.74
GPNMB-209ENST00000474157 RIC3Q7Z5B4 369 aa10.42□□□□□ -0.74
GPNMB-209ENST00000474157 LAPTM4BQ86VI4 370 aa10.42□□□□□ -0.74
GPNMB-209ENST00000474157 TDRD9Q8NDG6 1382 aaKnown RBP10.41□□□□□ -0.74
GPNMB-209ENST00000474157 MOXD2PA6NHM9 499 aa10.41□□□□□ -0.74
GPNMB-209ENST00000474157 BHMG1C9JSJ3 638 aaPredicted RBP10.41□□□□□ -0.74
GPNMB-209ENST00000474157 SLC10A3P09131 477 aa10.41□□□□□ -0.74
GPNMB-209ENST00000474157 SAMD7Q7Z3H4 446 aa10.41□□□□□ -0.74
GPNMB-209ENST00000474157 FLIIQ13045 1269 aa10.4□□□□□ -0.74
GPNMB-209ENST00000474157 ADGRD1Q6QNK2 874 aa10.4□□□□□ -0.74
GPNMB-209ENST00000474157 SYNJ1O43426 1573 aa10.39□□□□□ -0.75
GPNMB-209ENST00000474157 SPTLC1O15269 473 aa10.39□□□□□ -0.75
GPNMB-209ENST00000474157 RNF40O75150 1001 aa10.39□□□□□ -0.75
GPNMB-209ENST00000474157 KDM4AO75164 1064 aa10.39□□□□□ -0.75
GPNMB-209ENST00000474157 GCGRP47871 477 aa10.39□□□□□ -0.75
GPNMB-209ENST00000474157 SLC4A3P48751 1232 aa10.39□□□□□ -0.75
GPNMB-209ENST00000474157 RSBN1LQ6PCB5 846 aaPredicted RBP10.39□□□□□ -0.75
GPNMB-209ENST00000474157 NDUFV2P19404 249 aa10.38□□□□□ -0.75
GPNMB-209ENST00000474157 SLF2Q8IX21 1173 aa10.38□□□□□ -0.75
GPNMB-209ENST00000474157 MRPL50Q8N5N7 158 aaKnown RBP10.38□□□□□ -0.75
GPNMB-209ENST00000474157 ZFRQ96KR1 1074 aaKnown RBP10.38□□□□□ -0.75
GPNMB-209ENST00000474157 SNAPC4Q5SXM2 1469 aa10.37□□□□□ -0.75
GPNMB-209ENST00000474157 CSPP1Q1MSJ5 1256 aa10.37□□□□□ -0.75
GPNMB-209ENST00000474157 FBXO41Q8TF61 875 aa10.37□□□□□ -0.75
GPNMB-209ENST00000474157 TUSC1Q2TAM9 212 aa10.36□□□□□ -0.75
GPNMB-209ENST00000474157 FBXO31Q5XUX0 539 aaPredicted RBP10.36□□□□□ -0.75
GPNMB-209ENST00000474157 ZMYND15Q9H091 742 aa10.36□□□□□ -0.75
GPNMB-209ENST00000474157 TARBP1Q13395 1621 aaKnown RBP10.36□□□□□ -0.75
GPNMB-209ENST00000474157 SOGA1O94964 1423 aa10.35□□□□□ -0.75
GPNMB-209ENST00000474157 HOXA2O43364 376 aa10.35□□□□□ -0.75
GPNMB-209ENST00000474157 RFC5P40937 340 aa10.35□□□□□ -0.75
GPNMB-209ENST00000474157 USP46P62068 366 aa10.35□□□□□ -0.75
GPNMB-209ENST00000474157 FAM69CQ0P6D2 419 aa10.35□□□□□ -0.75
GPNMB-209ENST00000474157 GLIPR1L2Q4G1C9 344 aa10.35□□□□□ -0.75
GPNMB-209ENST00000474157 DNMBPQ6XZF7 1577 aa10.35□□□□□ -0.75
GPNMB-209ENST00000474157 HRO43593 1189 aa10.34□□□□□ -0.75
GPNMB-209ENST00000474157 CFHP08603 1231 aa10.34□□□□□ -0.75
GPNMB-209ENST00000474157 GJA5P36382 358 aa10.34□□□□□ -0.75
GPNMB-209ENST00000474157 MCM6Q14566 821 aa10.34□□□□□ -0.75
GPNMB-209ENST00000474157 ANKRD13DQ6ZTN6 518 aa10.34□□□□□ -0.75
GPNMB-209ENST00000474157 PCDHB15Q9Y5E8 787 aa10.34□□□□□ -0.75
GPNMB-209ENST00000474157 POLA1P09884 1462 aaPredicted RBP10.34□□□□□ -0.75
GPNMB-209ENST00000474157 SUPT5HO00267 1087 aaKnown RBP10.33□□□□□ -0.76
GPNMB-209ENST00000474157 PPP2R2DQ66LE6 453 aa10.33□□□□□ -0.76
GPNMB-209ENST00000474157 MAGI1Q96QZ7 1491 aaPredicted RBP10.33□□□□□ -0.76
GPNMB-209ENST00000474157 SYNJ2O15056 1496 aa10.32□□□□□ -0.76
GPNMB-209ENST00000474157 RAD54L2Q9Y4B4 1467 aa10.32□□□□□ -0.76
GPNMB-209ENST00000474157 FDX1P10109 184 aa10.32□□□□□ -0.76
GPNMB-209ENST00000474157 GUCA2AQ02747 115 aa10.32□□□□□ -0.76
GPNMB-209ENST00000474157 QPCTQ16769 361 aa10.32□□□□□ -0.76
GPNMB-209ENST00000474157 HLA-CQ95604 372 aa10.32□□□□□ -0.76
GPNMB-209ENST00000474157 LRCH3Q96II8 777 aa10.32□□□□□ -0.76
GPNMB-209ENST00000474157 FUT2Q10981 343 aa10.31□□□□□ -0.76
GPNMB-209ENST00000474157 STAC3Q96MF2 364 aa10.31□□□□□ -0.76
GPNMB-209ENST00000474157 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.31□□□□□ -0.76
GPNMB-209ENST00000474157 TOP2AP11388 1531 aaKnown RBP10.31□□□□□ -0.76
GPNMB-209ENST00000474157 LILRB3O75022 631 aa10.3□□□□□ -0.76
GPNMB-209ENST00000474157 CABLES1Q8TDN4 633 aa10.3□□□□□ -0.76
GPNMB-209ENST00000474157 GRIN2BQ13224 1484 aa10.3□□□□□ -0.76
GPNMB-209ENST00000474157 GOLGA8CPA6NN73 597 aa10.29□□□□□ -0.76
GPNMB-209ENST00000474157 UBTFP17480 764 aaKnown RBP10.29□□□□□ -0.76
GPNMB-209ENST00000474157 KMT5BQ4FZB7 885 aa10.29□□□□□ -0.76
GPNMB-209ENST00000474157 ANKK1Q8NFD2 765 aa10.29□□□□□ -0.76
GPNMB-209ENST00000474157 NUTM2BA6NNL0 878 aaPredicted RBP10.28□□□□□ -0.76
GPNMB-209ENST00000474157 NUTM2EB1AL46 878 aaPredicted RBP10.28□□□□□ -0.76
GPNMB-209ENST00000474157 TMEM259Q4ZIN3 620 aa10.28□□□□□ -0.76
GPNMB-209ENST00000474157 RTL5Q5HYW3 569 aaPredicted RBP10.28□□□□□ -0.76
GPNMB-209ENST00000474157 NUTM2DQ5VT03 806 aaPredicted RBP10.28□□□□□ -0.76
GPNMB-209ENST00000474157 PRPF38BQ5VTL8 546 aaKnown RBP10.28□□□□□ -0.76
GPNMB-209ENST00000474157 NUTM2AQ8IVF1 878 aaPredicted RBP10.28□□□□□ -0.76
GPNMB-209ENST00000474157 PCDHGC3Q9UN70 934 aa10.28□□□□□ -0.76
GPNMB-209ENST00000474157 SPDYE5A6NIY4 337 aa10.27□□□□□ -0.77
GPNMB-209ENST00000474157 GRIPAP1Q4V328 841 aa10.27□□□□□ -0.77
GPNMB-209ENST00000474157 BANK1Q8NDB2 785 aa10.27□□□□□ -0.77
GPNMB-209ENST00000474157 NECTIN2Q92692 538 aa10.27□□□□□ -0.77
GPNMB-209ENST00000474157 ZBTB3Q9H5J0 574 aa10.27□□□□□ -0.77
GPNMB-209ENST00000474157 CCDC88BA6NC98 1476 aa10.26□□□□□ -0.77
GPNMB-209ENST00000474157 ATP6V1AP38606 617 aa10.26□□□□□ -0.77
GPNMB-209ENST00000474157 DIEXFQ68CQ4 756 aaKnown RBP10.26□□□□□ -0.77
GPNMB-209ENST00000474157 CLUAP1Q96AJ1 413 aa10.26□□□□□ -0.77
GPNMB-209ENST00000474157 SNRKQ9NRH2 765 aa10.26□□□□□ -0.77
GPNMB-209ENST00000474157 BCAMP50895 628 aa10.25□□□□□ -0.77
GPNMB-209ENST00000474157 HPS5Q9UPZ3 1129 aa10.25□□□□□ -0.77
GPNMB-209ENST00000474157 ERCC6L2Q5T890 1561 aa10.25□□□□□ -0.77
GPNMB-209ENST00000474157 ABCC10Q5T3U5 1492 aa10.24□□□□□ -0.77
GPNMB-209ENST00000474157 SOWAHBA6NEL2 793 aa10.24□□□□□ -0.77
GPNMB-209ENST00000474157 AP1G2O75843 785 aa10.24□□□□□ -0.77
GPNMB-209ENST00000474157 KRTAP3-3Q9BYR6 98 aa10.24□□□□□ -0.77
GPNMB-209ENST00000474157 KRTAP3-2Q9BYR7 98 aa10.24□□□□□ -0.77
GPNMB-209ENST00000474157 LMTK3Q96Q04 1460 aa10.23□□□□□ -0.77
GPNMB-209ENST00000474157 ACTN4O43707 911 aaKnown RBP10.23□□□□□ -0.77
GPNMB-209ENST00000474157 MTMR2Q13614 643 aa10.23□□□□□ -0.77
GPNMB-209ENST00000474157 WNT2BQ93097 391 aa10.23□□□□□ -0.77
GPNMB-209ENST00000474157 WDR97A6NE52 1622 aa10.22□□□□□ -0.77
GPNMB-209ENST00000474157 PDIA4P13667 645 aaKnown RBP10.22□□□□□ -0.77
GPNMB-209ENST00000474157 PPP4CP60510 307 aa10.22□□□□□ -0.77
GPNMB-209ENST00000474157 PUS10Q3MIT2 529 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms