RNA–Protein interactions for RNA: ENST00000466441.5

UBP1-207, Transcript of upstream binding protein 1, humanhuman

TSL 1 (best)

Gene UBP1, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-207ENST00000466441 CFHP08603 1231 aa8.38□□□□□ -1.07
UBP1-207ENST00000466441 ATP6V1AP38606 617 aa8.38□□□□□ -1.07
UBP1-207ENST00000466441 CSPP1Q1MSJ5 1256 aa8.38□□□□□ -1.07
UBP1-207ENST00000466441 ANKK1Q8NFD2 765 aa8.38□□□□□ -1.07
UBP1-207ENST00000466441 CC2D2AQ9P2K1 1620 aa8.37□□□□□ -1.07
UBP1-207ENST00000466441 SOCS7O14512 581 aa8.37□□□□□ -1.07
UBP1-207ENST00000466441 ANKRD13DQ6ZTN6 518 aa8.37□□□□□ -1.07
UBP1-207ENST00000466441 PRM3Q9NNZ6 103 aa8.37□□□□□ -1.07
UBP1-207ENST00000466441 PCDHB15Q9Y5E8 787 aa8.36□□□□□ -1.07
UBP1-207ENST00000466441 FUT2Q10981 343 aa8.35□□□□□ -1.07
UBP1-207ENST00000466441 KRTAP3-3Q9BYR6 98 aa8.35□□□□□ -1.07
UBP1-207ENST00000466441 KRTAP3-2Q9BYR7 98 aa8.35□□□□□ -1.07
UBP1-207ENST00000466441 ACTN4O43707 911 aaKnown RBP8.34□□□□□ -1.07
UBP1-207ENST00000466441 HRCP23327 699 aa8.34□□□□□ -1.07
UBP1-207ENST00000466441 PPP4CP60510 307 aa8.34□□□□□ -1.07
UBP1-207ENST00000466441 MTMR2Q13614 643 aa8.34□□□□□ -1.07
UBP1-207ENST00000466441 QPCTQ16769 361 aa8.34□□□□□ -1.07
UBP1-207ENST00000466441 SOWAHBA6NEL2 793 aa8.33□□□□□ -1.08
UBP1-207ENST00000466441 AP1G2O75843 785 aa8.33□□□□□ -1.08
UBP1-207ENST00000466441 TSR3Q9UJK0 312 aaKnown RBP8.33□□□□□ -1.08
UBP1-207ENST00000466441 Q3C1V9 767 aa8.32□□□□□ -1.08
UBP1-207ENST00000466441 RTL5Q5HYW3 569 aaPredicted RBP8.32□□□□□ -1.08
UBP1-207ENST00000466441 WWC1Q8IX03 1113 aa8.32□□□□□ -1.08
UBP1-207ENST00000466441 HELBQ8NG08 1087 aaPredicted RBP8.32□□□□□ -1.08
UBP1-207ENST00000466441 PCDHGC3Q9UN70 934 aa8.32□□□□□ -1.08
UBP1-207ENST00000466441 ATAD2BQ9ULI0 1458 aa8.32□□□□□ -1.08
UBP1-207ENST00000466441 C6orf229H3BNL8 230 aa8.31□□□□□ -1.08
UBP1-207ENST00000466441 CABLES1Q8TDN4 633 aa8.31□□□□□ -1.08
UBP1-207ENST00000466441 WNT2BQ93097 391 aa8.31□□□□□ -1.08
UBP1-207ENST00000466441 ARXQ96QS3 562 aa8.31□□□□□ -1.08
UBP1-207ENST00000466441 SNRKQ9NRH2 765 aa8.31□□□□□ -1.08
UBP1-207ENST00000466441 PEG3Q9GZU2 1588 aa8.31□□□□□ -1.08
UBP1-207ENST00000466441 TRAK2O60296 914 aa8.3□□□□□ -1.08
UBP1-207ENST00000466441 FBXO31Q5XUX0 539 aaPredicted RBP8.3□□□□□ -1.08
UBP1-207ENST00000466441 CLUAP1Q96AJ1 413 aa8.3□□□□□ -1.08
UBP1-207ENST00000466441 HPS5Q9UPZ3 1129 aa8.3□□□□□ -1.08
UBP1-207ENST00000466441 GUCA2AQ02747 115 aa8.29□□□□□ -1.08
UBP1-207ENST00000466441 MORN1Q5T089 497 aa8.29□□□□□ -1.08
UBP1-207ENST00000466441 PROSER2Q86WR7 435 aaPredicted RBP8.29□□□□□ -1.08
UBP1-207ENST00000466441 USP17L8P0C7I0 530 aa8.28□□□□□ -1.08
UBP1-207ENST00000466441 HLA-CQ95604 372 aa8.28□□□□□ -1.08
UBP1-207ENST00000466441 SALL2Q9Y467 1007 aaPredicted RBP8.28□□□□□ -1.08
UBP1-207ENST00000466441 RETREG3Q86VR2 466 aa8.27□□□□□ -1.09
UBP1-207ENST00000466441 MTMR14Q8NCE2 650 aa8.27□□□□□ -1.09
UBP1-207ENST00000466441 COG6Q9Y2V7 657 aa8.27□□□□□ -1.09
UBP1-207ENST00000466441 TOP2AP11388 1531 aaKnown RBP8.27□□□□□ -1.09
UBP1-207ENST00000466441 NR1I2O75469 434 aa8.26□□□□□ -1.09
UBP1-207ENST00000466441 BCAMP50895 628 aa8.26□□□□□ -1.09
UBP1-207ENST00000466441 NYAP1Q6ZVC0 841 aa8.26□□□□□ -1.09
UBP1-207ENST00000466441 SLC27A5Q9Y2P5 690 aa8.26□□□□□ -1.09
UBP1-207ENST00000466441 SMARCA2P51531 1590 aa8.26□□□□□ -1.09
UBP1-207ENST00000466441 PUS10Q3MIT2 529 aaKnown RBP8.25□□□□□ -1.09
UBP1-207ENST00000466441 DESI1Q6ICB0 168 aa8.25□□□□□ -1.09
UBP1-207ENST00000466441 SPNS2Q8IVW8 549 aa8.25□□□□□ -1.09
UBP1-207ENST00000466441 PRR7Q8TB68 274 aa8.25□□□□□ -1.09
UBP1-207ENST00000466441 PCDHB3Q9Y5E6 796 aa8.25□□□□□ -1.09
UBP1-207ENST00000466441 FNBP4Q8N3X1 1017 aaPredicted RBP8.24□□□□□ -1.09
UBP1-207ENST00000466441 TSC1Q92574 1164 aa8.24□□□□□ -1.09
UBP1-207ENST00000466441 POM121Q96HA1 1249 aa8.24□□□□□ -1.09
UBP1-207ENST00000466441 BAZ1BQ9UIG0 1483 aaKnown RBP8.24□□□□□ -1.09
UBP1-207ENST00000466441 CFAP99D6REC4 459 aa8.23□□□□□ -1.09
UBP1-207ENST00000466441 FMNL1O95466 1100 aaPredicted RBP8.23□□□□□ -1.09
UBP1-207ENST00000466441 APLP1P51693 650 aa8.23□□□□□ -1.09
UBP1-207ENST00000466441 CTDSPL2Q05D32 466 aa8.23□□□□□ -1.09
UBP1-207ENST00000466441 MMRN1Q13201 1228 aa8.23□□□□□ -1.09
UBP1-207ENST00000466441 NDUFB9Q9Y6M9 179 aa8.23□□□□□ -1.09
UBP1-207ENST00000466441 NCAPD3P42695 1498 aa8.22□□□□□ -1.09
UBP1-207ENST00000466441 THSD4Q6ZMP0 1018 aa8.22□□□□□ -1.09
UBP1-207ENST00000466441 SCUBE3Q8IX30 993 aa8.22□□□□□ -1.09
UBP1-207ENST00000466441 USB1Q9BQ65 265 aaKnown RBP8.22□□□□□ -1.09
UBP1-207ENST00000466441 GDPD2Q9HCC8 539 aa8.22□□□□□ -1.09
UBP1-207ENST00000466441 HMGXB3Q12766 1538 aa8.22□□□□□ -1.09
UBP1-207ENST00000466441 BRICD5Q6PL45 260 aa8.21□□□□□ -1.1
UBP1-207ENST00000466441 HOMEZQ8IX15 550 aa8.21□□□□□ -1.1
UBP1-207ENST00000466441 PNMA1Q8ND90 353 aa8.21□□□□□ -1.1
UBP1-207ENST00000466441 SYMPKQ92797 1274 aaKnown RBP8.21□□□□□ -1.1
UBP1-207ENST00000466441 WBP1LQ9NX94 342 aa8.21□□□□□ -1.1
UBP1-207ENST00000466441 ZNF330Q9Y3S2 320 aaPredicted RBP8.21□□□□□ -1.1
UBP1-207ENST00000466441 CCDC88BA6NC98 1476 aa8.2□□□□□ -1.1
UBP1-207ENST00000466441 ABL2P42684 1182 aa8.19□□□□□ -1.1
UBP1-207ENST00000466441 WASHC4Q2M389 1173 aa8.19□□□□□ -1.1
UBP1-207ENST00000466441 KCTD12Q96CX2 325 aaKnown RBP8.19□□□□□ -1.1
UBP1-207ENST00000466441 GJD4Q96KN9 370 aaPredicted RBP8.19□□□□□ -1.1
UBP1-207ENST00000466441 ARID3CA6NKF2 412 aa8.18□□□□□ -1.1
UBP1-207ENST00000466441 BLOC1S3Q6QNY0 202 aa8.18□□□□□ -1.1
UBP1-207ENST00000466441 LYPD8Q6UX82 237 aa8.18□□□□□ -1.1
UBP1-207ENST00000466441 RNF19BQ6ZMZ0 732 aa8.18□□□□□ -1.1
UBP1-207ENST00000466441 ZNF777Q9ULD5 760 aaPredicted RBP8.18□□□□□ -1.1
UBP1-207ENST00000466441 TBC1D2BQ9UPU7 963 aa8.18□□□□□ -1.1
UBP1-207ENST00000466441 LRRN4Q8WUT4 740 aa8.17□□□□□ -1.1
UBP1-207ENST00000466441 THAP11Q96EK4 314 aa8.17□□□□□ -1.1
UBP1-207ENST00000466441 SERPINA10Q9UK55 444 aa8.17□□□□□ -1.1
UBP1-207ENST00000466441 MSS51Q4VC12 460 aa8.16□□□□□ -1.1
UBP1-207ENST00000466441 TRIM34Q9BYJ4 488 aa8.16□□□□□ -1.1
UBP1-207ENST00000466441 C1orf115Q9H7X2 142 aa8.16□□□□□ -1.1
UBP1-207ENST00000466441 HMX1Q9NP08 348 aaPredicted RBP8.16□□□□□ -1.1
UBP1-207ENST00000466441 JUNDP17535 347 aa8.15□□□□□ -1.1
UBP1-207ENST00000466441 CCDC97Q96F63 343 aaPredicted RBP8.15□□□□□ -1.1
UBP1-207ENST00000466441 SPSB2Q99619 263 aa8.15□□□□□ -1.1
UBP1-207ENST00000466441 PTPRNQ16849 979 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms