RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 C19orf44Q9H6X5 657 aa11.7□□□□□ -0.54
UBE4B-205ENST00000465408 SPHKAPQ2M3C7 1700 aa11.69□□□□□ -0.54
UBE4B-205ENST00000465408 IQGAP3Q86VI3 1631 aa11.68□□□□□ -0.54
UBE4B-205ENST00000465408 GLI3P10071 1580 aa11.68□□□□□ -0.54
UBE4B-205ENST00000465408 EN1Q05925 392 aaPredicted RBP11.68□□□□□ -0.54
UBE4B-205ENST00000465408 PTCH1Q13635 1447 aa11.68□□□□□ -0.54
UBE4B-205ENST00000465408 EIF4G2P78344 907 aaKnown RBP eCLIP11.67□□□□□ -0.54
UBE4B-205ENST00000465408 ZNF326Q5BKZ1 582 aaKnown RBP11.67□□□□□ -0.54
UBE4B-205ENST00000465408 NINLQ9Y2I6 1382 aa11.67□□□□□ -0.54
UBE4B-205ENST00000465408 EFCAB6Q5THR3 1501 aa11.66□□□□□ -0.54
UBE4B-205ENST00000465408 RALGAPBQ86X10 1494 aa11.66□□□□□ -0.54
UBE4B-205ENST00000465408 CAPN15O75808 1086 aa11.65□□□□□ -0.54
UBE4B-205ENST00000465408 BCANQ96GW7 911 aa11.65□□□□□ -0.54
UBE4B-205ENST00000465408 MST1RQ04912 1400 aa11.64□□□□□ -0.55
UBE4B-205ENST00000465408 GIGYF1O75420 1035 aaPredicted RBP11.64□□□□□ -0.55
UBE4B-205ENST00000465408 CENPBP07199 599 aaPredicted RBP11.64□□□□□ -0.55
UBE4B-205ENST00000465408 PPP1R1BQ9UD71 204 aaPredicted RBP11.64□□□□□ -0.55
UBE4B-205ENST00000465408 CEP152O94986 1710 aa11.63□□□□□ -0.55
UBE4B-205ENST00000465408 CCDC144AA2RUR9 1427 aa11.63□□□□□ -0.55
UBE4B-205ENST00000465408 STAG3Q9UJ98 1225 aa11.63□□□□□ -0.55
UBE4B-205ENST00000465408 SEPT12Q8IYM1 358 aa11.62□□□□□ -0.55
UBE4B-205ENST00000465408 KDM2AQ9Y2K7 1162 aa11.62□□□□□ -0.55
UBE4B-205ENST00000465408 WASHC2AQ641Q2 1341 aa11.61□□□□□ -0.55
UBE4B-205ENST00000465408 DCAF11Q8TEB1 546 aa11.61□□□□□ -0.55
UBE4B-205ENST00000465408 KANK1Q14678 1352 aa11.6□□□□□ -0.55
UBE4B-205ENST00000465408 PCDH10Q9P2E7 1040 aa11.6□□□□□ -0.55
UBE4B-205ENST00000465408 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.6□□□□□ -0.55
UBE4B-205ENST00000465408 DCCP43146 1447 aa11.6□□□□□ -0.55
UBE4B-205ENST00000465408 C11orf95C9JLR9 678 aaPredicted RBP11.59□□□□□ -0.55
UBE4B-205ENST00000465408 RGL3Q3MIN7 710 aa11.59□□□□□ -0.55
UBE4B-205ENST00000465408 KRT27Q7Z3Y8 459 aa11.59□□□□□ -0.55
UBE4B-205ENST00000465408 SPATA31E1Q6ZUB1 1445 aa11.59□□□□□ -0.55
UBE4B-205ENST00000465408 CCDC7Q96M83 1385 aa11.58□□□□□ -0.56
UBE4B-205ENST00000465408 EZH2Q15910 746 aaKnown RBP11.58□□□□□ -0.56
UBE4B-205ENST00000465408 MYOM2P54296 1465 aa11.57□□□□□ -0.56
UBE4B-205ENST00000465408 COL22A1Q8NFW1 1626 aaPredicted RBP11.57□□□□□ -0.56
UBE4B-205ENST00000465408 EIF2AK4Q9P2K8 1649 aaKnown RBP11.57□□□□□ -0.56
UBE4B-205ENST00000465408 USP47Q96K76 1375 aa11.57□□□□□ -0.56
UBE4B-205ENST00000465408 CHD4Q14839 1912 aa11.57□□□□□ -0.56
UBE4B-205ENST00000465408 E9PCH4 1651 aa11.57□□□□□ -0.56
UBE4B-205ENST00000465408 IDI1Q13907 227 aa11.57□□□□□ -0.56
UBE4B-205ENST00000465408 SPON1Q9HCB6 807 aa11.57□□□□□ -0.56
UBE4B-205ENST00000465408 DISP2A7MBM2 1401 aa11.57□□□□□ -0.56
UBE4B-205ENST00000465408 PLEKHG1Q9ULL1 1385 aa11.56□□□□□ -0.56
UBE4B-205ENST00000465408 ANP32CO43423 234 aa11.56□□□□□ -0.56
UBE4B-205ENST00000465408 RGPD1P0DJD0 1748 aa11.56□□□□□ -0.56
UBE4B-205ENST00000465408 ARHGAP31Q2M1Z3 1444 aa11.56□□□□□ -0.56
UBE4B-205ENST00000465408 MARF1Q9Y4F3 1742 aaKnown RBP11.56□□□□□ -0.56
UBE4B-205ENST00000465408 PRAG1Q86YV5 1406 aa11.55□□□□□ -0.56
UBE4B-205ENST00000465408 UNC5CLQ8IV45 518 aa11.55□□□□□ -0.56
UBE4B-205ENST00000465408 CARD11Q9BXL7 1154 aa11.55□□□□□ -0.56
UBE4B-205ENST00000465408 TRPM2O94759 1503 aa11.55□□□□□ -0.56
UBE4B-205ENST00000465408 KCNQ2O43526 872 aa11.54□□□□□ -0.56
UBE4B-205ENST00000465408 TBX22Q9Y458 520 aa11.54□□□□□ -0.56
UBE4B-205ENST00000465408 TNS1Q9HBL0 1735 aaKnown RBP11.54□□□□□ -0.56
UBE4B-205ENST00000465408 SOS2Q07890 1332 aaPredicted RBP11.54□□□□□ -0.56
UBE4B-205ENST00000465408 KIF7Q2M1P5 1343 aa11.54□□□□□ -0.56
UBE4B-205ENST00000465408 LAMC1P11047 1609 aa11.53□□□□□ -0.56
UBE4B-205ENST00000465408 PRELPP51888 382 aa11.53□□□□□ -0.56
UBE4B-205ENST00000465408 ADGRB3O60242 1522 aa11.53□□□□□ -0.56
UBE4B-205ENST00000465408 SLIT2O94813 1529 aa11.53□□□□□ -0.56
UBE4B-205ENST00000465408 ROCK2O75116 1388 aaKnown RBP11.53□□□□□ -0.56
UBE4B-205ENST00000465408 CLTCL1P53675 1640 aa11.53□□□□□ -0.56
UBE4B-205ENST00000465408 ZFYVE9O95405 1425 aa11.52□□□□□ -0.56
UBE4B-205ENST00000465408 ONECUT3O60422 494 aaPredicted RBP11.52□□□□□ -0.57
UBE4B-205ENST00000465408 CAMKK2Q96RR4 588 aa11.52□□□□□ -0.57
UBE4B-205ENST00000465408 COL13A1Q5TAT6 717 aaPredicted RBP11.51□□□□□ -0.57
UBE4B-205ENST00000465408 POLR3GLQ9BT43 218 aa11.51□□□□□ -0.57
UBE4B-205ENST00000465408 ADAMTS13Q76LX8 1427 aa11.51□□□□□ -0.57
UBE4B-205ENST00000465408 PTPRUQ92729 1446 aa11.51□□□□□ -0.57
UBE4B-205ENST00000465408 LMTK2Q8IWU2 1503 aa11.5□□□□□ -0.57
UBE4B-205ENST00000465408 TRPM1Q7Z4N2 1603 aa11.5□□□□□ -0.57
UBE4B-205ENST00000465408 CCER2I3L3R5 266 aa11.5□□□□□ -0.57
UBE4B-205ENST00000465408 NBPF1Q3BBV0 1214 aa11.5□□□□□ -0.57
UBE4B-205ENST00000465408 FAM182BQ5T319 152 aa11.5□□□□□ -0.57
UBE4B-205ENST00000465408 AMOTL2Q9Y2J4 779 aa11.49□□□□□ -0.57
UBE4B-205ENST00000465408 NRKQ7Z2Y5 1582 aa11.49□□□□□ -0.57
UBE4B-205ENST00000465408 ST20-MTHFSA0A0A6YYL1 179 aa11.48□□□□□ -0.57
UBE4B-205ENST00000465408 HSPA6P17066 643 aa11.48□□□□□ -0.57
UBE4B-205ENST00000465408 NUP188Q5SRE5 1749 aa11.47□□□□□ -0.57
UBE4B-205ENST00000465408 RREB1Q92766 1687 aa11.47□□□□□ -0.57
UBE4B-205ENST00000465408 C1orf167Q5SNV9 1468 aa11.47□□□□□ -0.57
UBE4B-205ENST00000465408 GPRASP1Q5JY77 1395 aa11.47□□□□□ -0.57
UBE4B-205ENST00000465408 PIK3R4Q99570 1358 aa11.47□□□□□ -0.57
UBE4B-205ENST00000465408 SHANK3Q9BYB0 1731 aa11.46□□□□□ -0.57
UBE4B-205ENST00000465408 RIMS2Q9UQ26 1411 aa11.46□□□□□ -0.57
UBE4B-205ENST00000465408 VPS72Q15906 364 aa11.46□□□□□ -0.57
UBE4B-205ENST00000465408 ORAI2Q96SN7 254 aa11.46□□□□□ -0.57
UBE4B-205ENST00000465408 MYOM1P52179 1685 aa11.46□□□□□ -0.58
UBE4B-205ENST00000465408 ADGRL3Q9HAR2 1447 aa11.45□□□□□ -0.58
UBE4B-205ENST00000465408 A0A0G2JS52 829 aa11.45□□□□□ -0.58
UBE4B-205ENST00000465408 MYT1Q01538 1121 aa11.45□□□□□ -0.58
UBE4B-205ENST00000465408 GTF3C3Q9Y5Q9 886 aa11.45□□□□□ -0.58
UBE4B-205ENST00000465408 ADGRB2O60241 1585 aa11.45□□□□□ -0.58
UBE4B-205ENST00000465408 NOS1P29475 1434 aa11.43□□□□□ -0.58
UBE4B-205ENST00000465408 CHGAP10645 457 aaKnown RBP11.43□□□□□ -0.58
UBE4B-205ENST00000465408 TNS4Q8IZW8 715 aa11.43□□□□□ -0.58
UBE4B-205ENST00000465408 CCDC9Q9Y3X0 531 aaKnown RBP11.43□□□□□ -0.58
UBE4B-205ENST00000465408 MYO5BQ9ULV0 1848 aa11.43□□□□□ -0.58
UBE4B-205ENST00000465408 XRN1Q8IZH2 1706 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms