RNA–Protein interactions for RNA: ENST00000462309.1

COL4A2-203, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 725 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-203ENST00000462309 PRM3Q9NNZ6 103 aa14.15□□□□□ -0.14
COL4A2-203ENST00000462309 SERPINA10Q9UK55 444 aa14.15□□□□□ -0.14
COL4A2-203ENST00000462309 MTMR2Q13614 643 aa14.14□□□□□ -0.15
COL4A2-203ENST00000462309 GRIPAP1Q4V328 841 aa14.14□□□□□ -0.15
COL4A2-203ENST00000462309 GJD4Q96KN9 370 aaPredicted RBP14.14□□□□□ -0.15
COL4A2-203ENST00000462309 TBC1D2BQ9UPU7 963 aa14.13□□□□□ -0.15
COL4A2-203ENST00000462309 CFHP08603 1231 aa14.12□□□□□ -0.15
COL4A2-203ENST00000462309 CTDSPL2Q05D32 466 aa14.12□□□□□ -0.15
COL4A2-203ENST00000462309 ZFRQ96KR1 1074 aaKnown RBP14.12□□□□□ -0.15
COL4A2-203ENST00000462309 POTEB3A0JP26 581 aa14.11□□□□□ -0.15
COL4A2-203ENST00000462309 ATP6V1AP38606 617 aa14.11□□□□□ -0.15
COL4A2-203ENST00000462309 POTEBQ6S5H4 581 aa14.11□□□□□ -0.15
COL4A2-203ENST00000462309 ABL2P42684 1182 aa14.1□□□□□ -0.15
COL4A2-203ENST00000462309 WWC1Q8IX03 1113 aa14.1□□□□□ -0.15
COL4A2-203ENST00000462309 CCDC97Q96F63 343 aaPredicted RBP14.09□□□□□ -0.15
COL4A2-203ENST00000462309 CFAP99D6REC4 459 aa14.08□□□□□ -0.16
COL4A2-203ENST00000462309 TRIM34Q9BYJ4 488 aa14.07□□□□□ -0.16
COL4A2-203ENST00000462309 HMX1Q9NP08 348 aaPredicted RBP14.07□□□□□ -0.16
COL4A2-203ENST00000462309 C6orf229H3BNL8 230 aa14.06□□□□□ -0.16
COL4A2-203ENST00000462309 KMT5BQ4FZB7 885 aa14.06□□□□□ -0.16
COL4A2-203ENST00000462309 HELBQ8NG08 1087 aaPredicted RBP14.06□□□□□ -0.16
COL4A2-203ENST00000462309 NDUFB9Q9Y6M9 179 aa14.06□□□□□ -0.16
COL4A2-203ENST00000462309 MRPL50Q8N5N7 158 aaKnown RBP14.05□□□□□ -0.16
COL4A2-203ENST00000462309 IRF5Q13568 498 aa14.04□□□□□ -0.16
COL4A2-203ENST00000462309 HRO43593 1189 aa14.03□□□□□ -0.16
COL4A2-203ENST00000462309 ACTN4O43707 911 aaKnown RBP14.03□□□□□ -0.16
COL4A2-203ENST00000462309 RNF40O75150 1001 aa14.03□□□□□ -0.16
COL4A2-203ENST00000462309 MORN1Q5T089 497 aa14.03□□□□□ -0.16
COL4A2-203ENST00000462309 ADGRD1Q6QNK2 874 aa14.03□□□□□ -0.16
COL4A2-203ENST00000462309 LRRN4Q8WUT4 740 aa14.03□□□□□ -0.16
COL4A2-203ENST00000462309 NECTIN2Q92692 538 aa14.03□□□□□ -0.16
COL4A2-203ENST00000462309 SYMPKQ92797 1274 aaKnown RBP14.03□□□□□ -0.16
COL4A2-203ENST00000462309 RNF166Q96A37 237 aaPredicted RBP14.03□□□□□ -0.16
COL4A2-203ENST00000462309 POM121CA8CG34 1229 aa14.02□□□□□ -0.17
COL4A2-203ENST00000462309 GPR37L1O60883 481 aa14.02□□□□□ -0.17
COL4A2-203ENST00000462309 LSM11P83369 360 aaKnown RBP eCLIP14.01□□□□□ -0.17
COL4A2-203ENST00000462309 LRCH3Q96II8 777 aa14.01□□□□□ -0.17
COL4A2-203ENST00000462309 PRR7Q8TB68 274 aa14□□□□□ -0.17
COL4A2-203ENST00000462309 CDKN2AIPQ9NXV6 580 aaPredicted RBP14□□□□□ -0.17
COL4A2-203ENST00000462309 TSC1Q92574 1164 aa13.99□□□□□ -0.17
COL4A2-203ENST00000462309 SLC27A5Q9Y2P5 690 aa13.99□□□□□ -0.17
COL4A2-203ENST00000462309 RETREG3Q86VR2 466 aa13.98□□□□□ -0.17
COL4A2-203ENST00000462309 CALR3Q96L12 384 aaKnown RBP13.98□□□□□ -0.17
COL4A2-203ENST00000462309 WASHC4Q2M389 1173 aa13.97□□□□□ -0.17
COL4A2-203ENST00000462309 PUS10Q3MIT2 529 aaKnown RBP13.97□□□□□ -0.17
COL4A2-203ENST00000462309 GLMNQ92990 594 aa13.97□□□□□ -0.17
COL4A2-203ENST00000462309 Q3C1V9 767 aa13.96□□□□□ -0.17
COL4A2-203ENST00000462309 DESI1Q6ICB0 168 aa13.95□□□□□ -0.18
COL4A2-203ENST00000462309 EPS8L1Q8TE68 723 aa13.95□□□□□ -0.18
COL4A2-203ENST00000462309 PRR14Q9BWN1 585 aa13.95□□□□□ -0.18
COL4A2-203ENST00000462309 TRIM26Q12899 539 aaPredicted RBP13.94□□□□□ -0.18
COL4A2-203ENST00000462309 PER1O15534 1290 aaPredicted RBP13.93□□□□□ -0.18
COL4A2-203ENST00000462309 SOWAHBA6NEL2 793 aa13.92□□□□□ -0.18
COL4A2-203ENST00000462309 PDIA4P13667 645 aaKnown RBP13.92□□□□□ -0.18
COL4A2-203ENST00000462309 ADAMTS19Q8TE59 1207 aa13.92□□□□□ -0.18
COL4A2-203ENST00000462309 SALL2Q9Y467 1007 aaPredicted RBP13.92□□□□□ -0.18
COL4A2-203ENST00000462309 HDGFL1Q5TGJ6 251 aa13.91□□□□□ -0.18
COL4A2-203ENST00000462309 ANKK1Q8NFD2 765 aa13.91□□□□□ -0.18
COL4A2-203ENST00000462309 PPP4CP60510 307 aa13.9□□□□□ -0.18
COL4A2-203ENST00000462309 NR6A1Q15406 480 aa13.9□□□□□ -0.18
COL4A2-203ENST00000462309 BRICD5Q6PL45 260 aa13.89□□□□□ -0.19
COL4A2-203ENST00000462309 LYPD8Q6UX82 237 aa13.89□□□□□ -0.19
COL4A2-203ENST00000462309 APLP1P51693 650 aa13.88□□□□□ -0.19
COL4A2-203ENST00000462309 VAC14Q08AM6 782 aa13.88□□□□□ -0.19
COL4A2-203ENST00000462309 BLOC1S3Q6QNY0 202 aa13.88□□□□□ -0.19
COL4A2-203ENST00000462309 RNF19BQ6ZMZ0 732 aa13.88□□□□□ -0.19
COL4A2-203ENST00000462309 GOLGA8CPA6NN73 597 aa13.87□□□□□ -0.19
COL4A2-203ENST00000462309 USB1Q9BQ65 265 aaKnown RBP13.87□□□□□ -0.19
COL4A2-203ENST00000462309 ALG2Q9H553 416 aa13.87□□□□□ -0.19
COL4A2-203ENST00000462309 MYT1LQ9UL68 1186 aa13.87□□□□□ -0.19
COL4A2-203ENST00000462309 HPS5Q9UPZ3 1129 aa13.87□□□□□ -0.19
COL4A2-203ENST00000462309 PPP1R15AO75807 674 aaPredicted RBP13.86□□□□□ -0.19
COL4A2-203ENST00000462309 SCUBE3Q8IX30 993 aa13.86□□□□□ -0.19
COL4A2-203ENST00000462309 STAC3Q96MF2 364 aa13.86□□□□□ -0.19
COL4A2-203ENST00000462309 PODXL2Q9NZ53 605 aa13.86□□□□□ -0.19
COL4A2-203ENST00000462309 TSR3Q9UJK0 312 aaKnown RBP13.86□□□□□ -0.19
COL4A2-203ENST00000462309 BCAMP50895 628 aa13.85□□□□□ -0.19
COL4A2-203ENST00000462309 ANKRD13DQ6ZTN6 518 aa13.85□□□□□ -0.19
COL4A2-203ENST00000462309 THAP11Q96EK4 314 aa13.85□□□□□ -0.19
COL4A2-203ENST00000462309 TRAIPQ9BWF2 469 aa13.84□□□□□ -0.19
COL4A2-203ENST00000462309 WNT2BQ93097 391 aa13.82□□□□□ -0.2
COL4A2-203ENST00000462309 PCDHB3Q9Y5E6 796 aa13.82□□□□□ -0.2
COL4A2-203ENST00000462309 FMNL1O95466 1100 aaPredicted RBP13.81□□□□□ -0.2
COL4A2-203ENST00000462309 SOX11P35716 441 aa13.81□□□□□ -0.2
COL4A2-203ENST00000462309 NR1I2O75469 434 aa13.8□□□□□ -0.2
COL4A2-203ENST00000462309 F12P00748 615 aaPredicted RBP13.78□□□□□ -0.2
COL4A2-203ENST00000462309 CFAP70Q5T0N1 1121 aa13.78□□□□□ -0.2
COL4A2-203ENST00000462309 PPP1R12CQ9BZL4 782 aa13.78□□□□□ -0.2
COL4A2-203ENST00000462309 SRPK2P78362 688 aaKnown RBP13.77□□□□□ -0.21
COL4A2-203ENST00000462309 RETREG2Q8NC44 543 aa13.77□□□□□ -0.21
COL4A2-203ENST00000462309 PNMA1Q8ND90 353 aa13.77□□□□□ -0.21
COL4A2-203ENST00000462309 ACIN1Q9UKV3 1341 aaKnown RBP13.76□□□□□ -0.21
COL4A2-203ENST00000462309 JUNDP17535 347 aa13.76□□□□□ -0.21
COL4A2-203ENST00000462309 WBP1LQ9NX94 342 aa13.76□□□□□ -0.21
COL4A2-203ENST00000462309 PTPRNQ16849 979 aa13.75□□□□□ -0.21
COL4A2-203ENST00000462309 PBXIP1Q96AQ6 731 aa13.75□□□□□ -0.21
COL4A2-203ENST00000462309 NR1H3Q13133 447 aa13.73□□□□□ -0.21
COL4A2-203ENST00000462309 MSS51Q4VC12 460 aa13.73□□□□□ -0.21
COL4A2-203ENST00000462309 UCN2Q96RP3 112 aa13.73□□□□□ -0.21
COL4A2-203ENST00000462309 FKBPLQ9UIM3 349 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms