RNA–Protein interactions for RNA: ENST00000462309.1

COL4A2-203, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 725 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-203ENST00000462309 CHIC1Q5VXU3 224 aa31.85■■■□□ 2.69
COL4A2-203ENST00000462309 AEBP2Q6ZN18 517 aaPredicted RBP31.82■■■□□ 2.68
COL4A2-203ENST00000462309 PHF23Q9BUL5 403 aaPredicted RBP28.13■■■□□ 2.09
COL4A2-203ENST00000462309 SENP3Q9H4L4 574 aaPredicted RBP27.26■■□□□ 1.95
COL4A2-203ENST00000462309 PLPPR3Q6T4P5 718 aa26.19■■□□□ 1.78
COL4A2-203ENST00000462309 POTEDQ86YR6 584 aa25.65■■□□□ 1.7
COL4A2-203ENST00000462309 FOXD1Q16676 465 aa25.45■■□□□ 1.66
COL4A2-203ENST00000462309 ADRA2BP18089 450 aa24.55■■□□□ 1.52
COL4A2-203ENST00000462309 PPP6R1Q9UPN7 881 aa24.55■■□□□ 1.52
COL4A2-203ENST00000462309 MSH5O43196 834 aa24.37■■□□□ 1.49
COL4A2-203ENST00000462309 KCNA4P22459 653 aa23.59■■□□□ 1.37
COL4A2-203ENST00000462309 PIAS4Q8N2W9 510 aaPredicted RBP23.58■■□□□ 1.37
COL4A2-203ENST00000462309 PPP4R3CPQ6ZMV5 832 aa23.19■■□□□ 1.3
COL4A2-203ENST00000462309 EHMT2Q96KQ7 1210 aa22.81■■□□□ 1.24
COL4A2-203ENST00000462309 NCBP3Q53F19 620 aaKnown RBP22.79■■□□□ 1.24
COL4A2-203ENST00000462309 SLC4A1APQ9BWU0 796 aaKnown RBP22.57■■□□□ 1.2
COL4A2-203ENST00000462309 NPM3O75607 178 aaKnown RBP22.5■■□□□ 1.19
COL4A2-203ENST00000462309 SCAF1Q9H7N4 1312 aaKnown RBP22.4■■□□□ 1.18
COL4A2-203ENST00000462309 CNKSR2Q8WXI2 1034 aa22.36■■□□□ 1.17
COL4A2-203ENST00000462309 CSRNP3Q8WYN3 585 aa22.3■■□□□ 1.16
COL4A2-203ENST00000462309 MAPK8IP2Q13387 824 aaPredicted RBP22.04■■□□□ 1.12
COL4A2-203ENST00000462309 DNAJC5BQ9UF47 199 aa21.83■■□□□ 1.09
COL4A2-203ENST00000462309 ZBTB22O15209 634 aa21.74■■□□□ 1.07
COL4A2-203ENST00000462309 RNF216Q9NWF9 866 aaPredicted RBP21.74■■□□□ 1.07
COL4A2-203ENST00000462309 CACNB1Q02641 598 aaPredicted RBP21.64■■□□□ 1.05
COL4A2-203ENST00000462309 DMRT2Q9Y5R5 561 aa21.56■■□□□ 1.04
COL4A2-203ENST00000462309 HOXD11P31277 338 aaPredicted RBP21.46■■□□□ 1.03
COL4A2-203ENST00000462309 FOXD4L1Q9NU39 408 aa21.45■■□□□ 1.02
COL4A2-203ENST00000462309 SLC4A2P04920 1241 aa21.08■□□□□ 0.97
COL4A2-203ENST00000462309 MYCNP04198 464 aaPredicted RBP20.74■□□□□ 0.91
COL4A2-203ENST00000462309 DCAF8L1A6NGE4 600 aa20.69■□□□□ 0.9
COL4A2-203ENST00000462309 ATXN8OSP0DMR3 200 aa20.67■□□□□ 0.9
COL4A2-203ENST00000462309 RNF39Q9H2S5 420 aa20.61■□□□□ 0.89
COL4A2-203ENST00000462309 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.36■□□□□ 0.85
COL4A2-203ENST00000462309 C1QBPQ07021 282 aaKnown RBP20.31■□□□□ 0.84
COL4A2-203ENST00000462309 ATF5Q9Y2D1 282 aaPredicted RBP20.18■□□□□ 0.82
COL4A2-203ENST00000462309 U3KPZ7 1027 aaPredicted RBP20.18■□□□□ 0.82
COL4A2-203ENST00000462309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.16■□□□□ 0.82
COL4A2-203ENST00000462309 HNRNPUL2Q1KMD3 747 aaKnown RBP20.16■□□□□ 0.82
COL4A2-203ENST00000462309 SAMD1Q6SPF0 538 aaPredicted RBP20.14■□□□□ 0.81
COL4A2-203ENST00000462309 FKBP8Q14318 412 aa20.03■□□□□ 0.8
COL4A2-203ENST00000462309 POTEHQ6S545 545 aa19.91■□□□□ 0.78
COL4A2-203ENST00000462309 APLP2Q06481 763 aa19.73■□□□□ 0.75
COL4A2-203ENST00000462309 ZNF219Q9P2Y4 722 aaPredicted RBP19.73■□□□□ 0.75
COL4A2-203ENST00000462309 AMER1Q5JTC6 1135 aaPredicted RBP19.69■□□□□ 0.74
COL4A2-203ENST00000462309 RTN4Q9NQC3 1192 aaKnown RBP19.68■□□□□ 0.74
COL4A2-203ENST00000462309 SPINK5Q9NQ38 1064 aaPredicted RBP19.37■□□□□ 0.69
COL4A2-203ENST00000462309 MKRN4PQ13434 485 aaPredicted RBP19.35■□□□□ 0.69
COL4A2-203ENST00000462309 TRHP20396 242 aaPredicted RBP19.31■□□□□ 0.68
COL4A2-203ENST00000462309 SPDYE4A6NLX3 237 aa19.25■□□□□ 0.67
COL4A2-203ENST00000462309 POLA2Q14181 598 aa19.21■□□□□ 0.67
COL4A2-203ENST00000462309 CAPN15O75808 1086 aa19.19■□□□□ 0.66
COL4A2-203ENST00000462309 FBLN2P98095 1184 aa19.19■□□□□ 0.66
COL4A2-203ENST00000462309 PROM2Q8N271 834 aa19.14■□□□□ 0.65
COL4A2-203ENST00000462309 FBXO3Q9UK99 471 aa19.1■□□□□ 0.65
COL4A2-203ENST00000462309 SLC24A1O60721 1099 aa19.08■□□□□ 0.64
COL4A2-203ENST00000462309 ZBTB12Q9Y330 459 aaPredicted RBP18.93■□□□□ 0.62
COL4A2-203ENST00000462309 DSG3P32926 999 aa18.92■□□□□ 0.62
COL4A2-203ENST00000462309 ABCB7O75027 752 aa18.9■□□□□ 0.62
COL4A2-203ENST00000462309 VASPP50552 380 aaPredicted RBP18.82■□□□□ 0.6
COL4A2-203ENST00000462309 IFNLR1Q8IU57 520 aaPredicted RBP18.67■□□□□ 0.58
COL4A2-203ENST00000462309 ZNF692Q9BU19 519 aaPredicted RBP18.56■□□□□ 0.56
COL4A2-203ENST00000462309 SPDYE2BA6NHP3 402 aa18.52■□□□□ 0.56
COL4A2-203ENST00000462309 SPDYE6P0CI01 402 aa18.52■□□□□ 0.56
COL4A2-203ENST00000462309 SPDYE2Q495Y8 402 aa18.52■□□□□ 0.56
COL4A2-203ENST00000462309 OSCARQ8IYS5 282 aa18.5■□□□□ 0.55
COL4A2-203ENST00000462309 SSUH2Q9Y2M2 353 aa18.5■□□□□ 0.55
COL4A2-203ENST00000462309 STAG3Q9UJ98 1225 aa18.41■□□□□ 0.54
COL4A2-203ENST00000462309 PKD2Q13563 968 aa18.37■□□□□ 0.53
COL4A2-203ENST00000462309 PABPN1Q86U42 306 aaKnown RBP eCLIP18.34■□□□□ 0.53
COL4A2-203ENST00000462309 SPOCK2Q92563 424 aa18.28■□□□□ 0.52
COL4A2-203ENST00000462309 KLHL34Q8N239 644 aa18.27■□□□□ 0.52
COL4A2-203ENST00000462309 PLCB2Q00722 1185 aa18.2■□□□□ 0.5
COL4A2-203ENST00000462309 RBM42Q9BTD8 480 aaKnown RBP18.2■□□□□ 0.5
COL4A2-203ENST00000462309 CHRDL2Q6WN34 429 aa18.18■□□□□ 0.5
COL4A2-203ENST00000462309 PLCD3Q8N3E9 789 aa18.18■□□□□ 0.5
COL4A2-203ENST00000462309 MIER1Q8N108 512 aa18.15■□□□□ 0.5
COL4A2-203ENST00000462309 SP7Q8TDD2 431 aaPredicted RBP18.14■□□□□ 0.49
COL4A2-203ENST00000462309 DCAF8L2P0C7V8 631 aa18.12■□□□□ 0.49
COL4A2-203ENST00000462309 ECM2O94769 699 aaPredicted RBP18.04■□□□□ 0.48
COL4A2-203ENST00000462309 ZBTB47Q9UFB7 747 aaPredicted RBP17.95■□□□□ 0.46
COL4A2-203ENST00000462309 PLEKHG5O94827 1062 aa17.94■□□□□ 0.46
COL4A2-203ENST00000462309 RGL2O15211 777 aa17.88■□□□□ 0.45
COL4A2-203ENST00000462309 HAP1P54257 671 aaPredicted RBP17.87■□□□□ 0.45
COL4A2-203ENST00000462309 NPM1P06748 294 aaKnown RBP eCLIP17.86■□□□□ 0.45
COL4A2-203ENST00000462309 BBXQ8WY36 941 aaPredicted RBP17.86■□□□□ 0.45
COL4A2-203ENST00000462309 CIZ1Q9ULV3 898 aaPredicted RBP17.81■□□□□ 0.44
COL4A2-203ENST00000462309 AKT1S1Q96B36 256 aa17.8■□□□□ 0.44
COL4A2-203ENST00000462309 SPDYE1Q8NFV5 336 aaPredicted RBP17.77■□□□□ 0.44
COL4A2-203ENST00000462309 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.77■□□□□ 0.44
COL4A2-203ENST00000462309 TRIM41Q8WV44 630 aa17.73■□□□□ 0.43
COL4A2-203ENST00000462309 VSIG10Q8N0Z9 540 aa17.7■□□□□ 0.42
COL4A2-203ENST00000462309 NUBP1P53384 320 aa17.67■□□□□ 0.42
COL4A2-203ENST00000462309 PAXIP1Q6ZW49 1069 aaPredicted RBP17.65■□□□□ 0.42
COL4A2-203ENST00000462309 GSE1Q14687 1217 aa17.64■□□□□ 0.41
COL4A2-203ENST00000462309 REM2Q8IYK8 340 aaPredicted RBP17.62■□□□□ 0.41
COL4A2-203ENST00000462309 CREBZFQ9NS37 354 aa17.61■□□□□ 0.41
COL4A2-203ENST00000462309 CLEC11AQ9Y240 323 aa17.6■□□□□ 0.41
COL4A2-203ENST00000462309 PRR29P0C7W0 189 aa17.59■□□□□ 0.41
COL4A2-203ENST00000462309 CFAP44Q96MT7 982 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms