RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 ST8SIA5O15466 376 aa9.52□□□□□ -0.89
PTPN12-209ENST00000460731 LMOD2Q6P5Q4 547 aa9.52□□□□□ -0.89
PTPN12-209ENST00000460731 TREML4Q6UXN2 200 aa9.52□□□□□ -0.89
PTPN12-209ENST00000460731 SCUBE3Q8IX30 993 aa9.52□□□□□ -0.89
PTPN12-209ENST00000460731 CRIPAKQ8N1N5 446 aa9.52□□□□□ -0.89
PTPN12-209ENST00000460731 WDR97A6NE52 1622 aa9.52□□□□□ -0.89
PTPN12-209ENST00000460731 ZNF608Q9ULD9 1512 aaPredicted RBP9.5□□□□□ -0.89
PTPN12-209ENST00000460731 KCNV2Q8TDN2 545 aa9.49□□□□□ -0.89
PTPN12-209ENST00000460731 PXYLP1Q8TE99 480 aa9.49□□□□□ -0.89
PTPN12-209ENST00000460731 TDRD9Q8NDG6 1382 aaKnown RBP9.49□□□□□ -0.89
PTPN12-209ENST00000460731 AQRO60306 1485 aaKnown RBP eCLIP9.47□□□□□ -0.893e-7■■■■□ 21.9
PTPN12-209ENST00000460731 AVPP01185 164 aa9.47□□□□□ -0.89
PTPN12-209ENST00000460731 NUTM2FA1L443 756 aa9.46□□□□□ -0.9
PTPN12-209ENST00000460731 RPIAP49247 311 aa9.46□□□□□ -0.9
PTPN12-209ENST00000460731 SPSB2Q99619 263 aa9.46□□□□□ -0.9
PTPN12-209ENST00000460731 TOR4AQ9NXH8 423 aa9.46□□□□□ -0.9
PTPN12-209ENST00000460731 IGF1RP08069 1367 aa9.46□□□□□ -0.9
PTPN12-209ENST00000460731 GAPVD1Q14C86 1478 aa9.46□□□□□ -0.9
PTPN12-209ENST00000460731 ABCA5Q8WWZ7 1642 aa9.45□□□□□ -0.9
PTPN12-209ENST00000460731 FCHSD2O94868 740 aa9.45□□□□□ -0.9
PTPN12-209ENST00000460731 KIF27Q86VH2 1401 aa9.45□□□□□ -0.9
PTPN12-209ENST00000460731 OATP04181 439 aa9.44□□□□□ -0.9
PTPN12-209ENST00000460731 PUS10Q3MIT2 529 aaKnown RBP9.44□□□□□ -0.9
PTPN12-209ENST00000460731 THAP11Q96EK4 314 aa9.44□□□□□ -0.9
PTPN12-209ENST00000460731 DACH1Q9UI36 760 aa9.44□□□□□ -0.9
PTPN12-209ENST00000460731 ERICH3Q5RHP9 1530 aa9.43□□□□□ -0.9
PTPN12-209ENST00000460731 GRIN2BQ13224 1484 aa9.43□□□□□ -0.9
PTPN12-209ENST00000460731 EIF4G3O43432 1585 aaKnown RBP9.42□□□□□ -0.9
PTPN12-209ENST00000460731 FOXC1Q12948 553 aa9.42□□□□□ -0.9
PTPN12-209ENST00000460731 METTL3Q86U44 580 aaKnown RBP9.42□□□□□ -0.9
PTPN12-209ENST00000460731 EEA1Q15075 1411 aa9.41□□□□□ -0.9
PTPN12-209ENST00000460731 SMCPP49901 116 aaPredicted RBP9.41□□□□□ -0.9
PTPN12-209ENST00000460731 MORN1Q5T089 497 aa9.41□□□□□ -0.9
PTPN12-209ENST00000460731 RUSC2Q8N2Y8 1516 aa9.41□□□□□ -0.9
PTPN12-209ENST00000460731 MAGI1Q96QZ7 1491 aaPredicted RBP9.4□□□□□ -0.9
PTPN12-209ENST00000460731 RSPH4AQ5TD94 716 aa9.39□□□□□ -0.91
PTPN12-209ENST00000460731 FAM160A2Q8N612 972 aaPredicted RBP9.39□□□□□ -0.91
PTPN12-209ENST00000460731 TSHZ2Q9NRE2 1034 aa9.39□□□□□ -0.91
PTPN12-209ENST00000460731 FCF1Q9Y324 198 aaKnown RBP9.39□□□□□ -0.91
PTPN12-209ENST00000460731 CD2BP2O95400 341 aaKnown RBP9.38□□□□□ -0.91
PTPN12-209ENST00000460731 CTC1Q2NKJ3 1217 aa9.38□□□□□ -0.91
PTPN12-209ENST00000460731 GMPR2Q9P2T1 348 aaKnown RBP9.38□□□□□ -0.91
PTPN12-209ENST00000460731 PRXQ9BXM0 1461 aa9.37□□□□□ -0.91
PTPN12-209ENST00000460731 HIC1Q14526 733 aa9.37□□□□□ -0.91
PTPN12-209ENST00000460731 SALL2Q9Y467 1007 aaPredicted RBP9.37□□□□□ -0.91
PTPN12-209ENST00000460731 FHAD1B1AJZ9 1412 aa9.37□□□□□ -0.91
PTPN12-209ENST00000460731 AXIN1O15169 862 aa9.36□□□□□ -0.91
PTPN12-209ENST00000460731 WFS1O76024 890 aa9.36□□□□□ -0.91
PTPN12-209ENST00000460731 NFX1Q12986 1120 aaKnown RBP9.36□□□□□ -0.91
PTPN12-209ENST00000460731 AMER1Q5JTC6 1135 aaPredicted RBP9.36□□□□□ -0.91
PTPN12-209ENST00000460731 DAXXQ9UER7 740 aaPredicted RBP9.36□□□□□ -0.91
PTPN12-209ENST00000460731 CARMIL1Q5VZK9 1371 aa9.36□□□□□ -0.91
PTPN12-209ENST00000460731 SYNJ2O15056 1496 aa9.35□□□□□ -0.91
PTPN12-209ENST00000460731 SNAPC4Q5SXM2 1469 aa9.35□□□□□ -0.91
PTPN12-209ENST00000460731 SEMA3EO15041 775 aa9.35□□□□□ -0.91
PTPN12-209ENST00000460731 FUT2Q10981 343 aa9.35□□□□□ -0.91
PTPN12-209ENST00000460731 CYP4X1Q8N118 509 aa9.35□□□□□ -0.91
PTPN12-209ENST00000460731 PBRM1Q86U86 1689 aa9.35□□□□□ -0.91
PTPN12-209ENST00000460731 C11orf95C9JLR9 678 aaPredicted RBP9.34□□□□□ -0.91
PTPN12-209ENST00000460731 WIPF1O43516 503 aa9.34□□□□□ -0.91
PTPN12-209ENST00000460731 ATP6V1AP38606 617 aa9.34□□□□□ -0.91
PTPN12-209ENST00000460731 SLC27A5Q9Y2P5 690 aa9.34□□□□□ -0.91
PTPN12-209ENST00000460731 FMNL1O95466 1100 aaPredicted RBP9.33□□□□□ -0.92
PTPN12-209ENST00000460731 BRICD5Q6PL45 260 aa9.33□□□□□ -0.92
PTPN12-209ENST00000460731 ADAMTS12P58397 1594 aa9.33□□□□□ -0.92
PTPN12-209ENST00000460731 CUL7Q14999 1698 aa9.32□□□□□ -0.92
PTPN12-209ENST00000460731 RTN4Q9NQC3 1192 aaKnown RBP9.32□□□□□ -0.92
PTPN12-209ENST00000460731 GPR37O15354 613 aa9.31□□□□□ -0.92
PTPN12-209ENST00000460731 FECHP22830 423 aa9.31□□□□□ -0.92
PTPN12-209ENST00000460731 GCGRP47871 477 aa9.31□□□□□ -0.92
PTPN12-209ENST00000460731 LCE2CQ5TA81 110 aa9.31□□□□□ -0.92
PTPN12-209ENST00000460731 CHMP7Q8WUX9 453 aaPredicted RBP9.31□□□□□ -0.92
PTPN12-209ENST00000460731 PRDM9Q9NQV7 894 aa9.31□□□□□ -0.92
PTPN12-209ENST00000460731 NUP160Q12769 1436 aa9.31□□□□□ -0.92
PTPN12-209ENST00000460731 GRIN2AQ12879 1464 aa9.3□□□□□ -0.92
PTPN12-209ENST00000460731 RAPGEF2Q9Y4G8 1499 aa9.3□□□□□ -0.92
PTPN12-209ENST00000460731 SMPD1P17405 629 aa9.3□□□□□ -0.92
PTPN12-209ENST00000460731 MSS51Q4VC12 460 aa9.3□□□□□ -0.92
PTPN12-209ENST00000460731 RDH13Q8NBN7 331 aa9.3□□□□□ -0.92
PTPN12-209ENST00000460731 STK17AQ9UEE5 414 aa9.3□□□□□ -0.92
PTPN12-209ENST00000460731 WNT7AO00755 349 aa9.29□□□□□ -0.92
PTPN12-209ENST00000460731 DDX11L8A8MPP1 907 aa9.28□□□□□ -0.92
PTPN12-209ENST00000460731 GNPATO15228 680 aa9.28□□□□□ -0.92
PTPN12-209ENST00000460731 P3H3Q8IVL6 736 aa9.28□□□□□ -0.92
PTPN12-209ENST00000460731 TESPA1A2RU30 521 aaPredicted RBP9.27□□□□□ -0.93
PTPN12-209ENST00000460731 PHOX2BQ99453 314 aa9.27□□□□□ -0.93
PTPN12-209ENST00000460731 KIF21BO75037 1637 aa9.27□□□□□ -0.93
PTPN12-209ENST00000460731 TTC24A2A3L6 582 aaPredicted RBP9.26□□□□□ -0.93
PTPN12-209ENST00000460731 RBM26Q5T8P6 1007 aaKnown RBP9.26□□□□□ -0.93
PTPN12-209ENST00000460731 RNF19BQ6ZMZ0 732 aa9.26□□□□□ -0.93
PTPN12-209ENST00000460731 SNIP1Q8TAD8 396 aaKnown RBP9.26□□□□□ -0.93
PTPN12-209ENST00000460731 NLRP7Q8WX94 980 aa9.26□□□□□ -0.93
PTPN12-209ENST00000460731 ATP13A2Q9NQ11 1180 aa9.26□□□□□ -0.93
PTPN12-209ENST00000460731 CHD1O14646 1710 aa9.25□□□□□ -0.93
PTPN12-209ENST00000460731 SNRPBP14678 240 aaKnown RBP9.25□□□□□ -0.93
PTPN12-209ENST00000460731 MMP16P51512 607 aa9.25□□□□□ -0.93
PTPN12-209ENST00000460731 FAM9AQ8IZU1 332 aaPredicted RBP9.25□□□□□ -0.93
PTPN12-209ENST00000460731 KIAA0586Q9BVV6 1533 aa9.25□□□□□ -0.93
PTPN12-209ENST00000460731 ZBTB24O43167 697 aaPredicted RBP9.24□□□□□ -0.93
PTPN12-209ENST00000460731 TRIM32Q13049 653 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms