RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 E9PSI1 815 aa10.37□□□□□ -0.75
SMCO1-202ENST00000452776 PITPNM1O00562 1244 aa10.37□□□□□ -0.75
SMCO1-202ENST00000452776 IRX3P78415 501 aaPredicted RBP10.37□□□□□ -0.75
SMCO1-202ENST00000452776 DIAPH3Q9NSV4 1193 aa10.37□□□□□ -0.75
SMCO1-202ENST00000452776 BRD2P25440 801 aaKnown RBP10.37□□□□□ -0.75
SMCO1-202ENST00000452776 WDR43Q15061 677 aaKnown RBP eCLIP10.37□□□□□ -0.75
SMCO1-202ENST00000452776 ZNF771Q7L3S4 317 aaPredicted RBP10.37□□□□□ -0.75
SMCO1-202ENST00000452776 ZNF830Q96NB3 372 aaPredicted RBP10.37□□□□□ -0.75
SMCO1-202ENST00000452776 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.37□□□□□ -0.75
SMCO1-202ENST00000452776 NKTRP30414 1462 aaKnown RBP10.36□□□□□ -0.75
SMCO1-202ENST00000452776 PAXIP1Q6ZW49 1069 aaPredicted RBP10.36□□□□□ -0.75
SMCO1-202ENST00000452776 CALCOCO1Q9P1Z2 691 aa10.36□□□□□ -0.75
SMCO1-202ENST00000452776 ARHGEF11O15085 1522 aa10.36□□□□□ -0.75
SMCO1-202ENST00000452776 PER1O15534 1290 aaPredicted RBP10.35□□□□□ -0.75
SMCO1-202ENST00000452776 NUCB2P80303 420 aa10.35□□□□□ -0.75
SMCO1-202ENST00000452776 CHAF1AQ13111 956 aaPredicted RBP10.35□□□□□ -0.75
SMCO1-202ENST00000452776 SYCP1Q15431 976 aa10.35□□□□□ -0.75
SMCO1-202ENST00000452776 SPRYD3Q8NCJ5 442 aa10.35□□□□□ -0.75
SMCO1-202ENST00000452776 TIGD1Q96MW7 591 aa10.35□□□□□ -0.75
SMCO1-202ENST00000452776 ZBTB12Q9Y330 459 aaPredicted RBP10.35□□□□□ -0.75
SMCO1-202ENST00000452776 UGGT2Q9NYU1 1516 aa10.35□□□□□ -0.75
SMCO1-202ENST00000452776 E9PCH4 1651 aa10.35□□□□□ -0.75
SMCO1-202ENST00000452776 SENP3-EIF4A1A0A087X0R7 540 aa10.35□□□□□ -0.75
SMCO1-202ENST00000452776 CFAP44Q96MT7 982 aa10.35□□□□□ -0.75
SMCO1-202ENST00000452776 ARHGEF12Q9NZN5 1544 aa10.34□□□□□ -0.75
SMCO1-202ENST00000452776 TPM3P06753 285 aa10.33□□□□□ -0.76
SMCO1-202ENST00000452776 EPRSP07814 1512 aaKnown RBP10.33□□□□□ -0.76
SMCO1-202ENST00000452776 FHOD3Q2V2M9 1422 aa10.33□□□□□ -0.76
SMCO1-202ENST00000452776 YY1AP1Q9H869 796 aa10.33□□□□□ -0.76
SMCO1-202ENST00000452776 CGNQ9P2M7 1197 aaKnown RBP10.33□□□□□ -0.76
SMCO1-202ENST00000452776 CHIC2Q9UKJ5 165 aa10.33□□□□□ -0.76
SMCO1-202ENST00000452776 PDZRN3Q9UPQ7 1066 aa10.33□□□□□ -0.76
SMCO1-202ENST00000452776 ST20-MTHFSA0A0A6YYL1 179 aa10.32□□□□□ -0.76
SMCO1-202ENST00000452776 PTMAP06454 111 aaKnown RBP10.32□□□□□ -0.76
SMCO1-202ENST00000452776 UVSSAQ2YD98 709 aa10.32□□□□□ -0.76
SMCO1-202ENST00000452776 AXDND1Q5T1B0 1012 aaPredicted RBP10.32□□□□□ -0.76
SMCO1-202ENST00000452776 PIBF1Q8WXW3 757 aa10.32□□□□□ -0.76
SMCO1-202ENST00000452776 ADAMTS8Q9UP79 889 aa10.32□□□□□ -0.76
SMCO1-202ENST00000452776 SNAPC4Q5SXM2 1469 aa10.31□□□□□ -0.76
SMCO1-202ENST00000452776 ZSCAN23Q3MJ62 389 aa10.31□□□□□ -0.76
SMCO1-202ENST00000452776 LRSAM1Q6UWE0 723 aa10.31□□□□□ -0.76
SMCO1-202ENST00000452776 P3H3Q8IVL6 736 aa10.31□□□□□ -0.76
SMCO1-202ENST00000452776 EFCC1Q9HA90 598 aa10.31□□□□□ -0.76
SMCO1-202ENST00000452776 CWC22Q9HCG8 908 aaKnown RBP10.31□□□□□ -0.76
SMCO1-202ENST00000452776 KIF16BQ96L93 1317 aa10.31□□□□□ -0.76
SMCO1-202ENST00000452776 CLGNO14967 610 aa10.3□□□□□ -0.76
SMCO1-202ENST00000452776 BAG4O95429 457 aaKnown RBP10.3□□□□□ -0.76
SMCO1-202ENST00000452776 KCNJ4P48050 445 aa10.3□□□□□ -0.76
SMCO1-202ENST00000452776 MFAP1P55081 439 aaKnown RBP10.3□□□□□ -0.76
SMCO1-202ENST00000452776 IRX5P78411 483 aaPredicted RBP10.3□□□□□ -0.76
SMCO1-202ENST00000452776 NOLC1Q14978 699 aaKnown RBP eCLIP10.3□□□□□ -0.76
SMCO1-202ENST00000452776 ATP2B3Q16720 1220 aa10.3□□□□□ -0.76
SMCO1-202ENST00000452776 ZNF710Q8N1W2 664 aa10.3□□□□□ -0.76
SMCO1-202ENST00000452776 FAM184AQ8NB25 1140 aa10.3□□□□□ -0.76
SMCO1-202ENST00000452776 ANKRD7Q92527 254 aa10.3□□□□□ -0.76
SMCO1-202ENST00000452776 RBSNQ9H1K0 784 aa10.3□□□□□ -0.76
SMCO1-202ENST00000452776 BCCIPQ9P287 314 aaKnown RBP eCLIP10.3□□□□□ -0.76
SMCO1-202ENST00000452776 POLA1P09884 1462 aaPredicted RBP10.3□□□□□ -0.76
SMCO1-202ENST00000452776 K7ELQ4 463 aaPredicted RBP10.29□□□□□ -0.76
SMCO1-202ENST00000452776 MBD3O95983 291 aa10.29□□□□□ -0.76
SMCO1-202ENST00000452776 SYAP1Q96A49 352 aaPredicted RBP10.29□□□□□ -0.76
SMCO1-202ENST00000452776 SPTLC3Q9NUV7 552 aa10.29□□□□□ -0.76
SMCO1-202ENST00000452776 RTEL1-TNFRSF6BF6WH68 1400 aa10.29□□□□□ -0.76
SMCO1-202ENST00000452776 CTR9Q6PD62 1173 aa10.28□□□□□ -0.76
SMCO1-202ENST00000452776 RGS22Q8NE09 1264 aa10.28□□□□□ -0.76
SMCO1-202ENST00000452776 ZFP91Q96JP5 570 aaPredicted RBP10.28□□□□□ -0.76
SMCO1-202ENST00000452776 ARID3AQ99856 593 aa10.28□□□□□ -0.76
SMCO1-202ENST00000452776 PANK3Q9H999 370 aa10.28□□□□□ -0.76
SMCO1-202ENST00000452776 NPC1L1Q9UHC9 1359 aa10.28□□□□□ -0.76
SMCO1-202ENST00000452776 PLEKHH1Q9ULM0 1364 aa10.28□□□□□ -0.76
SMCO1-202ENST00000452776 TULP2O00295 520 aa10.28□□□□□ -0.76
SMCO1-202ENST00000452776 PHF14O94880 888 aa10.28□□□□□ -0.76
SMCO1-202ENST00000452776 MMP14P50281 582 aa10.28□□□□□ -0.76
SMCO1-202ENST00000452776 CDCA8Q53HL2 280 aa10.28□□□□□ -0.76
SMCO1-202ENST00000452776 PLCD3Q8N3E9 789 aa10.28□□□□□ -0.76
SMCO1-202ENST00000452776 UNC13AQ9UPW8 1703 aa10.28□□□□□ -0.76
SMCO1-202ENST00000452776 ZNF608Q9ULD9 1512 aaPredicted RBP10.27□□□□□ -0.76
SMCO1-202ENST00000452776 CC2D2AQ9P2K1 1620 aa10.27□□□□□ -0.76
SMCO1-202ENST00000452776 VGLL3A8MV65 326 aa10.27□□□□□ -0.77
SMCO1-202ENST00000452776 GEMIN8Q9NWZ8 242 aaKnown RBP10.27□□□□□ -0.77
SMCO1-202ENST00000452776 CFTRP13569 1480 aa10.27□□□□□ -0.77
SMCO1-202ENST00000452776 GRIN2BQ13224 1484 aa10.27□□□□□ -0.77
SMCO1-202ENST00000452776 BICRAQ9NZM4 1560 aa10.26□□□□□ -0.77
SMCO1-202ENST00000452776 CTIFO43310 598 aaKnown RBP10.26□□□□□ -0.77
SMCO1-202ENST00000452776 FKBP5Q13451 457 aaPredicted RBP10.26□□□□□ -0.77
SMCO1-202ENST00000452776 BCL2L12Q9HB09 334 aa10.26□□□□□ -0.77
SMCO1-202ENST00000452776 PLXNC1O60486 1568 aa10.26□□□□□ -0.77
SMCO1-202ENST00000452776 KDM6BO15054 1643 aa10.26□□□□□ -0.77
SMCO1-202ENST00000452776 BCAR3O75815 825 aa10.26□□□□□ -0.77
SMCO1-202ENST00000452776 CAVIN1Q6NZI2 390 aaKnown RBP10.26□□□□□ -0.77
SMCO1-202ENST00000452776 COG6Q9Y2V7 657 aa10.26□□□□□ -0.77
SMCO1-202ENST00000452776 MORC2Q9Y6X9 1032 aaPredicted RBP10.26□□□□□ -0.77
SMCO1-202ENST00000452776 SAMD9Q5K651 1589 aa10.25□□□□□ -0.77
SMCO1-202ENST00000452776 PRIM1P49642 420 aaKnown RBP10.25□□□□□ -0.77
SMCO1-202ENST00000452776 HDAC1Q13547 482 aaPredicted RBP10.25□□□□□ -0.77
SMCO1-202ENST00000452776 LMBRD1Q9NUN5 540 aa10.25□□□□□ -0.77
SMCO1-202ENST00000452776 YEATS2Q9ULM3 1422 aa10.25□□□□□ -0.77
SMCO1-202ENST00000452776 SLFN14P0C7P3 912 aa10.24□□□□□ -0.77
SMCO1-202ENST00000452776 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.24□□□□□ -0.77
SMCO1-202ENST00000452776 PLCB2Q00722 1185 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms