RNA–Protein interactions for RNA: ENST00000448748.1

LINC00349-201, long intergenic non-protein coding RNA 349, humanhuman

TSL 5 BASIC

Gene LINC00349, Length 841 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00349-201ENST00000448748 TARBP1Q13395 1621 aaKnown RBP12.23□□□□□ -0.45
LINC00349-201ENST00000448748 SUPT5HO00267 1087 aaKnown RBP12.23□□□□□ -0.45
LINC00349-201ENST00000448748 TLL1O43897 1013 aa12.23□□□□□ -0.45
LINC00349-201ENST00000448748 NR1I2O75469 434 aa12.23□□□□□ -0.45
LINC00349-201ENST00000448748 ATP6V1AP38606 617 aa12.23□□□□□ -0.45
LINC00349-201ENST00000448748 PDE4DQ08499 809 aa12.22□□□□□ -0.45
LINC00349-201ENST00000448748 MORN1Q5T089 497 aa12.22□□□□□ -0.45
LINC00349-201ENST00000448748 SCUBE3Q8IX30 993 aa12.22□□□□□ -0.45
LINC00349-201ENST00000448748 IFT140Q96RY7 1462 aa12.21□□□□□ -0.45
LINC00349-201ENST00000448748 KDM4AO75164 1064 aa12.21□□□□□ -0.45
LINC00349-201ENST00000448748 CUX1P39880 1505 aa12.21□□□□□ -0.46
LINC00349-201ENST00000448748 POLA1P09884 1462 aaPredicted RBP12.2□□□□□ -0.46
LINC00349-201ENST00000448748 PPP1R18Q6NYC8 613 aa12.18□□□□□ -0.46
LINC00349-201ENST00000448748 SLC27A5Q9Y2P5 690 aa12.18□□□□□ -0.46
LINC00349-201ENST00000448748 GRIPAP1Q4V328 841 aa12.17□□□□□ -0.46
LINC00349-201ENST00000448748 WDR97A6NE52 1622 aa12.17□□□□□ -0.46
LINC00349-201ENST00000448748 MS4A1P11836 297 aa12.16□□□□□ -0.46
LINC00349-201ENST00000448748 HLA-CQ95604 372 aa12.16□□□□□ -0.46
LINC00349-201ENST00000448748 EIF4G3O43432 1585 aaKnown RBP12.16□□□□□ -0.46
LINC00349-201ENST00000448748 ZNF608Q9ULD9 1512 aaPredicted RBP12.16□□□□□ -0.46
LINC00349-201ENST00000448748 ADH1BP00325 375 aa12.15□□□□□ -0.46
LINC00349-201ENST00000448748 BIVM-ERCC5R4GMW8 1640 aa12.15□□□□□ -0.47
LINC00349-201ENST00000448748 HOXA2O43364 376 aa12.14□□□□□ -0.47
LINC00349-201ENST00000448748 USP46P62068 366 aa12.14□□□□□ -0.47
LINC00349-201ENST00000448748 NUTM1Q86Y26 1132 aa12.14□□□□□ -0.47
LINC00349-201ENST00000448748 BEGAINQ9BUH8 593 aa12.14□□□□□ -0.47
LINC00349-201ENST00000448748 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.14□□□□□ -0.47
LINC00349-201ENST00000448748 FGD5Q6ZNL6 1462 aa12.14□□□□□ -0.47
LINC00349-201ENST00000448748 THAP11Q96EK4 314 aa12.13□□□□□ -0.47
LINC00349-201ENST00000448748 SPSB2Q99619 263 aa12.13□□□□□ -0.47
LINC00349-201ENST00000448748 SPIRE2Q8WWL2 714 aa12.12□□□□□ -0.47
LINC00349-201ENST00000448748 TOP2BQ02880 1626 aa12.11□□□□□ -0.47
LINC00349-201ENST00000448748 S1PR4O95977 384 aa12.11□□□□□ -0.47
LINC00349-201ENST00000448748 GUCA2AQ02747 115 aa12.11□□□□□ -0.47
LINC00349-201ENST00000448748 TPRNQ4KMQ1 711 aa12.11□□□□□ -0.47
LINC00349-201ENST00000448748 RNF19BQ6ZMZ0 732 aa12.11□□□□□ -0.47
LINC00349-201ENST00000448748 RGS20O76081 388 aa12.1□□□□□ -0.47
LINC00349-201ENST00000448748 FMNL1O95466 1100 aaPredicted RBP12.1□□□□□ -0.47
LINC00349-201ENST00000448748 GGCXP38435 758 aa12.1□□□□□ -0.47
LINC00349-201ENST00000448748 BRICD5Q6PL45 260 aa12.1□□□□□ -0.47
LINC00349-201ENST00000448748 SYNJ1O43426 1573 aa12.09□□□□□ -0.47
LINC00349-201ENST00000448748 SLC6A16Q9GZN6 736 aa12.09□□□□□ -0.47
LINC00349-201ENST00000448748 SALL2Q9Y467 1007 aaPredicted RBP12.09□□□□□ -0.47
LINC00349-201ENST00000448748 RNF223E7ERA6 249 aa12.08□□□□□ -0.48
LINC00349-201ENST00000448748 RAD54L2Q9Y4B4 1467 aa12.08□□□□□ -0.48
LINC00349-201ENST00000448748 Q3C1V9 767 aa12.07□□□□□ -0.48
LINC00349-201ENST00000448748 ABCA5Q8WWZ7 1642 aa12.07□□□□□ -0.48
LINC00349-201ENST00000448748 PPEF1O14829 653 aaPredicted RBP12.06□□□□□ -0.48
LINC00349-201ENST00000448748 NDUFV2P19404 249 aa12.06□□□□□ -0.48
LINC00349-201ENST00000448748 FAM160A2Q8N612 972 aaPredicted RBP12.06□□□□□ -0.48
LINC00349-201ENST00000448748 GPBP1L1Q9HC44 474 aaPredicted RBP12.06□□□□□ -0.48
LINC00349-201ENST00000448748 ABCA10Q8WWZ4 1543 aa12.06□□□□□ -0.48
LINC00349-201ENST00000448748 SOGA1O94964 1423 aa12.05□□□□□ -0.48
LINC00349-201ENST00000448748 WRNQ14191 1432 aaPredicted RBP eCLIP12.05□□□□□ -0.48
LINC00349-201ENST00000448748 MOXD2PA6NHM9 499 aa12.05□□□□□ -0.48
LINC00349-201ENST00000448748 TBC1D2Q9BYX2 928 aa12.05□□□□□ -0.48
LINC00349-201ENST00000448748 FDX1P10109 184 aa12.04□□□□□ -0.48
LINC00349-201ENST00000448748 PRDM9Q9NQV7 894 aa12.04□□□□□ -0.48
LINC00349-201ENST00000448748 PCDHGC3Q9UN70 934 aa12.04□□□□□ -0.48
LINC00349-201ENST00000448748 AQRO60306 1485 aaKnown RBP eCLIP12.03□□□□□ -0.48
LINC00349-201ENST00000448748 SYMPKQ92797 1274 aaKnown RBP12.02□□□□□ -0.49
LINC00349-201ENST00000448748 KDM4CQ9H3R0 1056 aa12.02□□□□□ -0.49
LINC00349-201ENST00000448748 PBRM1Q86U86 1689 aa12.02□□□□□ -0.49
LINC00349-201ENST00000448748 CHD1O14646 1710 aa12.01□□□□□ -0.49
LINC00349-201ENST00000448748 ANKLE1Q8NAG6 615 aa12.01□□□□□ -0.49
LINC00349-201ENST00000448748 USB1Q9BQ65 265 aaKnown RBP12.01□□□□□ -0.49
LINC00349-201ENST00000448748 PRKD2Q9BZL6 878 aa12.01□□□□□ -0.49
LINC00349-201ENST00000448748 DIXDC1Q155Q3 683 aa12□□□□□ -0.49
LINC00349-201ENST00000448748 MSS51Q4VC12 460 aa12□□□□□ -0.49
LINC00349-201ENST00000448748 MAGI1Q96QZ7 1491 aaPredicted RBP11.99□□□□□ -0.49
LINC00349-201ENST00000448748 RSBN1LQ6PCB5 846 aaPredicted RBP11.98□□□□□ -0.49
LINC00349-201ENST00000448748 EMID1Q96A84 441 aaPredicted RBP11.98□□□□□ -0.49
LINC00349-201ENST00000448748 GRIN2BQ13224 1484 aa11.97□□□□□ -0.49
LINC00349-201ENST00000448748 TDRD9Q8NDG6 1382 aaKnown RBP11.97□□□□□ -0.49
LINC00349-201ENST00000448748 PLA2G2CQ5R387 149 aa11.97□□□□□ -0.49
LINC00349-201ENST00000448748 C6orf229H3BNL8 230 aa11.96□□□□□ -0.49
LINC00349-201ENST00000448748 MYSM1Q5VVJ2 828 aa11.96□□□□□ -0.49
LINC00349-201ENST00000448748 FCF1Q9Y324 198 aaKnown RBP11.96□□□□□ -0.49
LINC00349-201ENST00000448748 V9GY48 417 aaPredicted RBP11.96□□□□□ -0.49
LINC00349-201ENST00000448748 GAPVD1Q14C86 1478 aa11.95□□□□□ -0.5
LINC00349-201ENST00000448748 SNAPC4Q5SXM2 1469 aa11.95□□□□□ -0.5
LINC00349-201ENST00000448748 SPTLC1O15269 473 aa11.95□□□□□ -0.5
LINC00349-201ENST00000448748 RIC3Q7Z5B4 369 aa11.95□□□□□ -0.5
LINC00349-201ENST00000448748 FAM117AQ9C073 453 aa11.95□□□□□ -0.5
LINC00349-201ENST00000448748 PCDHB15Q9Y5E8 787 aa11.95□□□□□ -0.5
LINC00349-201ENST00000448748 GJA5P36382 358 aa11.94□□□□□ -0.5
LINC00349-201ENST00000448748 MMP16P51512 607 aa11.94□□□□□ -0.5
LINC00349-201ENST00000448748 RETREG3Q86VR2 466 aa11.94□□□□□ -0.5
LINC00349-201ENST00000448748 DXOO77932 396 aaKnown RBP11.93□□□□□ -0.5
LINC00349-201ENST00000448748 PRKCSHP14314 528 aaPredicted RBP11.93□□□□□ -0.5
LINC00349-201ENST00000448748 NEUROD2Q15784 382 aa11.93□□□□□ -0.5
LINC00349-201ENST00000448748 LIMD1Q9UGP4 676 aa11.93□□□□□ -0.5
LINC00349-201ENST00000448748 ADAMTS12P58397 1594 aa11.92□□□□□ -0.5
LINC00349-201ENST00000448748 ERICH3Q5RHP9 1530 aa11.92□□□□□ -0.5
LINC00349-201ENST00000448748 SYNJ2O15056 1496 aa11.92□□□□□ -0.5
LINC00349-201ENST00000448748 SLC19A1P41440 591 aa11.92□□□□□ -0.5
LINC00349-201ENST00000448748 LIAT1Q6ZQX7 453 aa11.92□□□□□ -0.5
LINC00349-201ENST00000448748 CLASP1Q7Z460 1538 aa11.91□□□□□ -0.5
LINC00349-201ENST00000448748 MTMR2Q13614 643 aa11.91□□□□□ -0.5
LINC00349-201ENST00000448748 PLEKHG3A1L390 1219 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms