RNA–Protein interactions for RNA: ENST00000448582.6

FAM60A-202, Transcript of Protein FAM60A, humanhuman

TSL 1 (best)

Gene FAM60A, Length 3,111 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-202ENST00000448582 NPATQ14207 1427 aa7.32□□□□□ -1.24
FAM60A-202ENST00000448582 POLR1AO95602 1720 aaPredicted RBP7.32□□□□□ -1.24
FAM60A-202ENST00000448582 SPHKAPQ2M3C7 1700 aa7.32□□□□□ -1.24
FAM60A-202ENST00000448582 CLIP1P30622 1438 aa7.32□□□□□ -1.24
FAM60A-202ENST00000448582 KIF4AO95239 1232 aa7.32□□□□□ -1.24
FAM60A-202ENST00000448582 AGLP35573 1532 aa7.31□□□□□ -1.24
FAM60A-202ENST00000448582 UHRF1BP1Q6BDS2 1440 aa7.3□□□□□ -1.24
FAM60A-202ENST00000448582 PRG4Q92954 1404 aaPredicted RBP7.3□□□□□ -1.24
FAM60A-202ENST00000448582 POLD1P28340 1107 aa7.3□□□□□ -1.24
FAM60A-202ENST00000448582 SKIV2LQ15477 1246 aaKnown RBP7.3□□□□□ -1.24
FAM60A-202ENST00000448582 ABCA8O94911 1581 aa7.3□□□□□ -1.24
FAM60A-202ENST00000448582 NWD1Q149M9 1564 aa7.3□□□□□ -1.24
FAM60A-202ENST00000448582 PLEKHG3A1L390 1219 aa7.3□□□□□ -1.24
FAM60A-202ENST00000448582 CCER2I3L3R5 266 aa7.3□□□□□ -1.24
FAM60A-202ENST00000448582 MRRFQ96E11 262 aaKnown RBP7.3□□□□□ -1.24
FAM60A-202ENST00000448582 CDCA7Q9BWT1 371 aaPredicted RBP7.3□□□□□ -1.24
FAM60A-202ENST00000448582 VPS8Q8N3P4 1428 aa7.3□□□□□ -1.24
FAM60A-202ENST00000448582 FAM135AQ9P2D6 1515 aa7.3□□□□□ -1.24
FAM60A-202ENST00000448582 PARNO95453 639 aaKnown RBP7.3□□□□□ -1.24
FAM60A-202ENST00000448582 CANXP27824 592 aaKnown RBP7.3□□□□□ -1.24
FAM60A-202ENST00000448582 DSG3P32926 999 aa7.3□□□□□ -1.24
FAM60A-202ENST00000448582 RGL3Q3MIN7 710 aa7.3□□□□□ -1.24
FAM60A-202ENST00000448582 ZC3H4Q9UPT8 1303 aaKnown RBP7.29□□□□□ -1.24
FAM60A-202ENST00000448582 TCOF1Q13428 1488 aaKnown RBP7.29□□□□□ -1.24
FAM60A-202ENST00000448582 DEPDC5O75140 1603 aa7.29□□□□□ -1.24
FAM60A-202ENST00000448582 RALBP1Q15311 655 aa7.29□□□□□ -1.24
FAM60A-202ENST00000448582 GORABQ5T7V8 394 aa7.29□□□□□ -1.24
FAM60A-202ENST00000448582 ARMCX6Q7L4S7 300 aa7.29□□□□□ -1.24
FAM60A-202ENST00000448582 DNAJC14Q6Y2X3 702 aaPredicted RBP7.28□□□□□ -1.24
FAM60A-202ENST00000448582 SH3BP1Q9Y3L3 701 aa7.28□□□□□ -1.24
FAM60A-202ENST00000448582 LRRC9Q6ZRR7 1453 aa7.28□□□□□ -1.24
FAM60A-202ENST00000448582 PRXQ9BXM0 1461 aa7.28□□□□□ -1.24
FAM60A-202ENST00000448582 ABCB7O75027 752 aa7.28□□□□□ -1.24
FAM60A-202ENST00000448582 RINLQ6ZS11 566 aa7.27□□□□□ -1.24
FAM60A-202ENST00000448582 NEFMP07197 916 aa7.27□□□□□ -1.25
FAM60A-202ENST00000448582 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.27□□□□□ -1.25
FAM60A-202ENST00000448582 SUPT16HQ9Y5B9 1047 aaKnown RBP7.27□□□□□ -1.25
FAM60A-202ENST00000448582 IVNS1ABPQ9Y6Y0 642 aa7.27□□□□□ -1.25
FAM60A-202ENST00000448582 SHPRHQ149N8 1683 aa7.26□□□□□ -1.25
FAM60A-202ENST00000448582 ZNF830Q96NB3 372 aaPredicted RBP7.26□□□□□ -1.25
FAM60A-202ENST00000448582 RHBDL3P58872 404 aa7.26□□□□□ -1.25
FAM60A-202ENST00000448582 PMM1Q92871 262 aa7.26□□□□□ -1.25
FAM60A-202ENST00000448582 FHOD3Q2V2M9 1422 aa7.26□□□□□ -1.25
FAM60A-202ENST00000448582 UNC13BO14795 1591 aa7.26□□□□□ -1.25
FAM60A-202ENST00000448582 ATL2Q8NHH9 583 aa7.25□□□□□ -1.25
FAM60A-202ENST00000448582 ERBB3P21860 1342 aa7.25□□□□□ -1.25
FAM60A-202ENST00000448582 SSFA2P28290 1259 aa7.25□□□□□ -1.25
FAM60A-202ENST00000448582 MIER1Q8N108 512 aa7.24□□□□□ -1.25
FAM60A-202ENST00000448582 UPF1Q92900 1129 aaKnown RBP eCLIP7.24□□□□□ -1.258e-9■■■■□ 21
FAM60A-202ENST00000448582 CCDC97Q96F63 343 aaPredicted RBP7.24□□□□□ -1.25
FAM60A-202ENST00000448582 TMX4Q9H1E5 349 aaPredicted RBP7.23□□□□□ -1.25
FAM60A-202ENST00000448582 KIF27Q86VH2 1401 aa7.23□□□□□ -1.25
FAM60A-202ENST00000448582 LRRC7Q96NW7 1537 aa7.23□□□□□ -1.25
FAM60A-202ENST00000448582 GET4Q7L5D6 327 aaPredicted RBP7.23□□□□□ -1.25
FAM60A-202ENST00000448582 CREBRFQ8IUR6 639 aa7.23□□□□□ -1.25
FAM60A-202ENST00000448582 MTA3Q9BTC8 594 aa7.23□□□□□ -1.25
FAM60A-202ENST00000448582 SPOCK2Q92563 424 aa7.23□□□□□ -1.25
FAM60A-202ENST00000448582 AKNAQ7Z591 1439 aa7.22□□□□□ -1.25
FAM60A-202ENST00000448582 HDAC5Q9UQL6 1122 aa7.22□□□□□ -1.25
FAM60A-202ENST00000448582 C3P01024 1663 aa7.22□□□□□ -1.25
FAM60A-202ENST00000448582 ZFYVE27Q5T4F4 411 aa7.22□□□□□ -1.25
FAM60A-202ENST00000448582 MCM6Q14566 821 aa7.21□□□□□ -1.25
FAM60A-202ENST00000448582 NOM1Q5C9Z4 860 aaKnown RBP7.21□□□□□ -1.25
FAM60A-202ENST00000448582 CIZ1Q9ULV3 898 aaPredicted RBP7.21□□□□□ -1.25
FAM60A-202ENST00000448582 FGD5Q6ZNL6 1462 aa7.21□□□□□ -1.25
FAM60A-202ENST00000448582 IRF6O14896 467 aa7.21□□□□□ -1.26
FAM60A-202ENST00000448582 PHF14O94880 888 aa7.21□□□□□ -1.26
FAM60A-202ENST00000448582 SEMA3FQ13275 785 aa7.21□□□□□ -1.26
FAM60A-202ENST00000448582 TXNDC2Q86VQ3 553 aa7.21□□□□□ -1.26
FAM60A-202ENST00000448582 FNBP4Q8N3X1 1017 aaPredicted RBP7.21□□□□□ -1.26
FAM60A-202ENST00000448582 SSUH2Q9Y2M2 353 aa7.21□□□□□ -1.26
FAM60A-202ENST00000448582 CNTLNQ9NXG0 1405 aa7.21□□□□□ -1.26
FAM60A-202ENST00000448582 CNGB1Q14028 1251 aaPredicted RBP7.21□□□□□ -1.26
FAM60A-202ENST00000448582 XIRP1Q702N8 1843 aaKnown RBP7.2□□□□□ -1.26
FAM60A-202ENST00000448582 CREB3O43889 395 aa7.2□□□□□ -1.26
FAM60A-202ENST00000448582 RTL5Q5HYW3 569 aaPredicted RBP7.2□□□□□ -1.26
FAM60A-202ENST00000448582 MAMSTRQ6ZN01 415 aa7.2□□□□□ -1.26
FAM60A-202ENST00000448582 SPDYE2BA6NHP3 402 aa7.2□□□□□ -1.26
FAM60A-202ENST00000448582 DHX16O60231 1041 aaKnown RBP7.2□□□□□ -1.26
FAM60A-202ENST00000448582 SPDYE6P0CI01 402 aa7.2□□□□□ -1.26
FAM60A-202ENST00000448582 SPDYE2Q495Y8 402 aa7.2□□□□□ -1.26
FAM60A-202ENST00000448582 SPOCK3Q9BQ16 436 aa7.2□□□□□ -1.26
FAM60A-202ENST00000448582 AMOTL2Q9Y2J4 779 aa7.2□□□□□ -1.26
FAM60A-202ENST00000448582 TAGLNQ01995 201 aaKnown RBP7.19□□□□□ -1.26
FAM60A-202ENST00000448582 PROSER2Q86WR7 435 aaPredicted RBP7.19□□□□□ -1.26
FAM60A-202ENST00000448582 P3H3Q8IVL6 736 aa7.19□□□□□ -1.26
FAM60A-202ENST00000448582 PDE4DQ08499 809 aa7.19□□□□□ -1.26
FAM60A-202ENST00000448582 PLSCR2Q9NRY7 297 aa7.19□□□□□ -1.26
FAM60A-202ENST00000448582 FGD6Q6ZV73 1430 aa7.19□□□□□ -1.26
FAM60A-202ENST00000448582 EPB41L2O43491 1005 aaKnown RBP7.18□□□□□ -1.26
FAM60A-202ENST00000448582 MYBPC2Q14324 1141 aa7.18□□□□□ -1.26
FAM60A-202ENST00000448582 AATKQ6ZMQ8 1374 aa7.18□□□□□ -1.26
FAM60A-202ENST00000448582 VWDEQ8N2E2 1590 aa7.18□□□□□ -1.26
FAM60A-202ENST00000448582 CCDC96Q2M329 555 aa7.18□□□□□ -1.26
FAM60A-202ENST00000448582 KRBA2Q6ZNG9 492 aa7.18□□□□□ -1.26
FAM60A-202ENST00000448582 HELBQ8NG08 1087 aaPredicted RBP7.18□□□□□ -1.26
FAM60A-202ENST00000448582 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.18□□□□□ -1.26
FAM60A-202ENST00000448582 RBM46Q8TBY0 533 aaKnown RBP7.18□□□□□ -1.26
FAM60A-202ENST00000448582 ZFYVE16Q7Z3T8 1539 aa7.17□□□□□ -1.26
FAM60A-202ENST00000448582 ARHGAP23Q9P227 1491 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms