RNA–Protein interactions for RNA: ENST00000447829.5

MLH1-209, Transcript of mutL homolog 1, humanhuman

TSL 1 (best)

Gene MLH1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MLH1-209ENST00000447829 PTPN5P54829 565 aa12.06□□□□□ -0.48
MLH1-209ENST00000447829 POLR3EQ9NVU0 708 aa12.06□□□□□ -0.48
MLH1-209ENST00000447829 FUT2Q10981 343 aa12.05□□□□□ -0.48
MLH1-209ENST00000447829 ATP1B4Q9UN42 357 aaPredicted RBP12.05□□□□□ -0.48
MLH1-209ENST00000447829 EIF4G3O43432 1585 aaKnown RBP12.05□□□□□ -0.48
MLH1-209ENST00000447829 AQRO60306 1485 aaKnown RBP eCLIP12.04□□□□□ -0.481e-7■■■■■ 32.3
MLH1-209ENST00000447829 USP46P62068 366 aa12.04□□□□□ -0.48
MLH1-209ENST00000447829 SKIV2LQ15477 1246 aaKnown RBP12.04□□□□□ -0.48
MLH1-209ENST00000447829 PRR14Q9BWN1 585 aa12.04□□□□□ -0.48
MLH1-209ENST00000447829 GOPCQ9HD26 462 aa12.04□□□□□ -0.48
MLH1-209ENST00000447829 MOXD2PA6NHM9 499 aa12.03□□□□□ -0.48
MLH1-209ENST00000447829 ACTN4O43707 911 aaKnown RBP12.03□□□□□ -0.48
MLH1-209ENST00000447829 NDUFV2P19404 249 aa12.03□□□□□ -0.48
MLH1-209ENST00000447829 APLP1P51693 650 aa12.03□□□□□ -0.48
MLH1-209ENST00000447829 PCMTD1Q96MG8 357 aaPredicted RBP12.03□□□□□ -0.48
MLH1-209ENST00000447829 HOXA2O43364 376 aa12.02□□□□□ -0.49
MLH1-209ENST00000447829 RIC3Q7Z5B4 369 aa12.02□□□□□ -0.49
MLH1-209ENST00000447829 ATP6V1AP38606 617 aa12.01□□□□□ -0.49
MLH1-209ENST00000447829 CLK2P49760 499 aaKnown RBP12.01□□□□□ -0.49
MLH1-209ENST00000447829 GRIPAP1Q4V328 841 aa12.01□□□□□ -0.49
MLH1-209ENST00000447829 CHMP7Q8WUX9 453 aaPredicted RBP12.01□□□□□ -0.49
MLH1-209ENST00000447829 RNF166Q96A37 237 aaPredicted RBP12.01□□□□□ -0.49
MLH1-209ENST00000447829 PROCA1Q8NCQ7 364 aaPredicted RBP12□□□□□ -0.49
MLH1-209ENST00000447829 TOPBP1Q92547 1522 aa12□□□□□ -0.49
MLH1-209ENST00000447829 PUS10Q3MIT2 529 aaKnown RBP11.99□□□□□ -0.49
MLH1-209ENST00000447829 RSBN1LQ6PCB5 846 aaPredicted RBP11.99□□□□□ -0.49
MLH1-209ENST00000447829 HLA-CQ95604 372 aa11.99□□□□□ -0.49
MLH1-209ENST00000447829 LIMD1Q9UGP4 676 aa11.99□□□□□ -0.49
MLH1-209ENST00000447829 ABCC8Q09428 1581 aa11.98□□□□□ -0.49
MLH1-209ENST00000447829 SPTLC1O15269 473 aa11.98□□□□□ -0.49
MLH1-209ENST00000447829 GUCA2AQ02747 115 aa11.98□□□□□ -0.49
MLH1-209ENST00000447829 PCDHB3Q9Y5E6 796 aa11.98□□□□□ -0.49
MLH1-209ENST00000447829 FDX1P10109 184 aa11.97□□□□□ -0.49
MLH1-209ENST00000447829 CSPP1Q1MSJ5 1256 aa11.97□□□□□ -0.49
MLH1-209ENST00000447829 NYAP1Q6ZVC0 841 aa11.97□□□□□ -0.49
MLH1-209ENST00000447829 MORN1Q5T089 497 aa11.95□□□□□ -0.5
MLH1-209ENST00000447829 GJA5P36382 358 aa11.94□□□□□ -0.5
MLH1-209ENST00000447829 PCDHB15Q9Y5E8 787 aa11.94□□□□□ -0.5
MLH1-209ENST00000447829 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.93□□□□□ -0.5
MLH1-209ENST00000447829 HCSTQ9UBK5 93 aa11.93□□□□□ -0.5
MLH1-209ENST00000447829 PCDHGC3Q9UN70 934 aa11.93□□□□□ -0.5
MLH1-209ENST00000447829 SLC27A5Q9Y2P5 690 aa11.93□□□□□ -0.5
MLH1-209ENST00000447829 BLOC1S3Q6QNY0 202 aa11.92□□□□□ -0.5
MLH1-209ENST00000447829 GTF3C3Q9Y5Q9 886 aa11.92□□□□□ -0.5
MLH1-209ENST00000447829 SYNJ1O43426 1573 aa11.92□□□□□ -0.5
MLH1-209ENST00000447829 GAPVD1Q14C86 1478 aa11.91□□□□□ -0.5
MLH1-209ENST00000447829 COPS2P61201 443 aa11.91□□□□□ -0.5
MLH1-209ENST00000447829 MMRN1Q13201 1228 aa11.91□□□□□ -0.5
MLH1-209ENST00000447829 TUSC1Q2TAM9 212 aa11.91□□□□□ -0.5
MLH1-209ENST00000447829 PRDM2Q13029 1718 aa11.91□□□□□ -0.5
MLH1-209ENST00000447829 NR1I2O75469 434 aa11.9□□□□□ -0.5
MLH1-209ENST00000447829 TDRD9Q8NDG6 1382 aaKnown RBP11.9□□□□□ -0.5
MLH1-209ENST00000447829 NUTM2BA6NNL0 878 aaPredicted RBP11.89□□□□□ -0.51
MLH1-209ENST00000447829 NUTM2EB1AL46 878 aaPredicted RBP11.89□□□□□ -0.51
MLH1-209ENST00000447829 QPCTQ16769 361 aa11.89□□□□□ -0.51
MLH1-209ENST00000447829 NUTM2DQ5VT03 806 aaPredicted RBP11.89□□□□□ -0.51
MLH1-209ENST00000447829 NUTM2AQ8IVF1 878 aaPredicted RBP11.89□□□□□ -0.51
MLH1-209ENST00000447829 SCUBE3Q8IX30 993 aa11.89□□□□□ -0.51
MLH1-209ENST00000447829 CABLES1Q8TDN4 633 aa11.89□□□□□ -0.51
MLH1-209ENST00000447829 TOP2AP11388 1531 aaKnown RBP11.89□□□□□ -0.51
MLH1-209ENST00000447829 CLASP1Q7Z460 1538 aa11.89□□□□□ -0.51
MLH1-209ENST00000447829 DNMBPQ6XZF7 1577 aa11.88□□□□□ -0.51
MLH1-209ENST00000447829 C6orf229H3BNL8 230 aa11.88□□□□□ -0.51
MLH1-209ENST00000447829 Q3C1V9 767 aa11.88□□□□□ -0.51
MLH1-209ENST00000447829 ZBTB3Q9H5J0 574 aa11.88□□□□□ -0.51
MLH1-209ENST00000447829 SNAPC4Q5SXM2 1469 aa11.88□□□□□ -0.51
MLH1-209ENST00000447829 TARBP1Q13395 1621 aaKnown RBP11.87□□□□□ -0.51
MLH1-209ENST00000447829 LILRB3O75022 631 aa11.87□□□□□ -0.51
MLH1-209ENST00000447829 HRCP23327 699 aa11.87□□□□□ -0.51
MLH1-209ENST00000447829 PRPF38BQ5VTL8 546 aaKnown RBP11.87□□□□□ -0.51
MLH1-209ENST00000447829 SYMPKQ92797 1274 aaKnown RBP11.87□□□□□ -0.51
MLH1-209ENST00000447829 MTRQ99707 1265 aa11.87□□□□□ -0.51
MLH1-209ENST00000447829 MTMR2Q13614 643 aa11.86□□□□□ -0.51
MLH1-209ENST00000447829 FBXO31Q5XUX0 539 aaPredicted RBP11.86□□□□□ -0.51
MLH1-209ENST00000447829 SOGA1O94964 1423 aa11.85□□□□□ -0.51
MLH1-209ENST00000447829 RTL5Q5HYW3 569 aaPredicted RBP11.84□□□□□ -0.51
MLH1-209ENST00000447829 RNF19BQ6ZMZ0 732 aa11.84□□□□□ -0.51
MLH1-209ENST00000447829 POLA1P09884 1462 aaPredicted RBP11.83□□□□□ -0.52
MLH1-209ENST00000447829 RAD54L2Q9Y4B4 1467 aa11.83□□□□□ -0.52
MLH1-209ENST00000447829 FMNL1O95466 1100 aaPredicted RBP11.83□□□□□ -0.52
MLH1-209ENST00000447829 TJAP1Q5JTD0 557 aa11.83□□□□□ -0.52
MLH1-209ENST00000447829 PPP2R2DQ66LE6 453 aa11.83□□□□□ -0.52
MLH1-209ENST00000447829 IL21Q9HBE4 155 aa11.83□□□□□ -0.52
MLH1-209ENST00000447829 ZPR1O75312 459 aa11.82□□□□□ -0.52
MLH1-209ENST00000447829 RFC5P40937 340 aa11.82□□□□□ -0.52
MLH1-209ENST00000447829 BRICD5Q6PL45 260 aa11.82□□□□□ -0.52
MLH1-209ENST00000447829 SALL2Q9Y467 1007 aaPredicted RBP11.82□□□□□ -0.52
MLH1-209ENST00000447829 SPDYE5A6NIY4 337 aa11.81□□□□□ -0.52
MLH1-209ENST00000447829 ZNF516Q92618 1163 aa11.81□□□□□ -0.52
MLH1-209ENST00000447829 THAP11Q96EK4 314 aa11.81□□□□□ -0.52
MLH1-209ENST00000447829 MAGI1Q96QZ7 1491 aaPredicted RBP11.81□□□□□ -0.52
MLH1-209ENST00000447829 RETREG3Q86VR2 466 aa11.8□□□□□ -0.52
MLH1-209ENST00000447829 CCDC88BA6NC98 1476 aa11.8□□□□□ -0.52
MLH1-209ENST00000447829 SYNJ2O15056 1496 aa11.79□□□□□ -0.52
MLH1-209ENST00000447829 TLL1O43897 1013 aa11.79□□□□□ -0.52
MLH1-209ENST00000447829 TSC1Q92574 1164 aa11.79□□□□□ -0.52
MLH1-209ENST00000447829 SPSB2Q99619 263 aa11.79□□□□□ -0.52
MLH1-209ENST00000447829 USB1Q9BQ65 265 aaKnown RBP11.79□□□□□ -0.52
MLH1-209ENST00000447829 FAM69CQ0P6D2 419 aa11.78□□□□□ -0.52
MLH1-209ENST00000447829 PRR7Q8TB68 274 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms