RNA–Protein interactions for RNA: ENST00000442744.6

UBA52-202, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA52, Length 2,845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52-202ENST00000442744 ERBB3P21860 1342 aa13.65□□□□□ -0.22
UBA52-202ENST00000442744 CALRP27797 417 aaKnown RBP13.65□□□□□ -0.22
UBA52-202ENST00000442744 CALD1Q05682 793 aaKnown RBP13.65□□□□□ -0.22
UBA52-202ENST00000442744 TRIM44Q96DX7 344 aaPredicted RBP13.65□□□□□ -0.22
UBA52-202ENST00000442744 PTPN23Q9H3S7 1636 aa13.65□□□□□ -0.22
UBA52-202ENST00000442744 SNAPC4Q5SXM2 1469 aa13.65□□□□□ -0.22
UBA52-202ENST00000442744 EFCAB5A4FU69 1503 aa13.65□□□□□ -0.22
UBA52-202ENST00000442744 GOLIM4O00461 696 aa13.65□□□□□ -0.22
UBA52-202ENST00000442744 NRDCO43847 1150 aa13.65□□□□□ -0.22
UBA52-202ENST00000442744 ARHGEF1Q92888 912 aaKnown RBP13.65□□□□□ -0.22
UBA52-202ENST00000442744 MAF1Q9H063 256 aa13.65□□□□□ -0.22
UBA52-202ENST00000442744 RBM47A0AV96 593 aaKnown RBP13.64□□□□□ -0.23
UBA52-202ENST00000442744 ATL2Q8NHH9 583 aa13.64□□□□□ -0.23
UBA52-202ENST00000442744 CHIC2Q9UKJ5 165 aa13.64□□□□□ -0.23
UBA52-202ENST00000442744 KDM5BQ9UGL1 1544 aa13.64□□□□□ -0.23
UBA52-202ENST00000442744 HMGB1P1B2RPK0 211 aaPredicted RBP13.63□□□□□ -0.23
UBA52-202ENST00000442744 TSR1Q2NL82 804 aaKnown RBP13.63□□□□□ -0.23
UBA52-202ENST00000442744 PROSER2Q86WR7 435 aaPredicted RBP13.63□□□□□ -0.23
UBA52-202ENST00000442744 IVNS1ABPQ9Y6Y0 642 aa13.63□□□□□ -0.23
UBA52-202ENST00000442744 HFM1A2PYH4 1435 aa13.63□□□□□ -0.23
UBA52-202ENST00000442744 NAIPQ13075 1403 aa13.63□□□□□ -0.23
UBA52-202ENST00000442744 UACAQ9BZF9 1416 aa13.63□□□□□ -0.23
UBA52-202ENST00000442744 EXOC5O00471 708 aa13.63□□□□□ -0.23
UBA52-202ENST00000442744 SCP2P22307 547 aa13.63□□□□□ -0.23
UBA52-202ENST00000442744 POM121Q96HA1 1249 aa13.63□□□□□ -0.23
UBA52-202ENST00000442744 RRP7BPQ9NSQ0 103 aa13.63□□□□□ -0.23
UBA52-202ENST00000442744 GABBR1Q9UBS5 961 aa13.63□□□□□ -0.23
UBA52-202ENST00000442744 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.63□□□□□ -0.23
UBA52-202ENST00000442744 CTTNBP2Q8WZ74 1663 aa13.63□□□□□ -0.23
UBA52-202ENST00000442744 SEMA3EO15041 775 aa13.63□□□□□ -0.23
UBA52-202ENST00000442744 MSH5O43196 834 aa13.63□□□□□ -0.23
UBA52-202ENST00000442744 CCDC184Q52MB2 194 aa13.63□□□□□ -0.23
UBA52-202ENST00000442744 ABCA10Q8WWZ4 1543 aa13.62□□□□□ -0.23
UBA52-202ENST00000442744 CIZ1Q9ULV3 898 aaPredicted RBP13.62□□□□□ -0.23
UBA52-202ENST00000442744 CCDC194A0A1B0GVG4 234 aa13.62□□□□□ -0.23
UBA52-202ENST00000442744 NBPF9Q3BBW0 867 aa13.62□□□□□ -0.23
UBA52-202ENST00000442744 RBM46Q8TBY0 533 aaKnown RBP13.62□□□□□ -0.23
UBA52-202ENST00000442744 TARBP1Q13395 1621 aaKnown RBP13.61□□□□□ -0.23
UBA52-202ENST00000442744 ZKSCAN2Q63HK3 967 aa13.61□□□□□ -0.23
UBA52-202ENST00000442744 SND1Q7KZF4 910 aaKnown RBP eCLIP13.61□□□□□ -0.231e-19■□□□□ 9.8
UBA52-202ENST00000442744 WASHC2AQ641Q2 1341 aa13.61□□□□□ -0.23
UBA52-202ENST00000442744 RGL3Q3MIN7 710 aa13.61□□□□□ -0.23
UBA52-202ENST00000442744 NCOA2Q15596 1464 aa13.6□□□□□ -0.23
UBA52-202ENST00000442744 DDX46Q7L014 1031 aaKnown RBP13.6□□□□□ -0.23
UBA52-202ENST00000442744 TCF3P15923 654 aa13.6□□□□□ -0.23
UBA52-202ENST00000442744 UBXN4Q92575 508 aa13.6□□□□□ -0.23
UBA52-202ENST00000442744 CACTIN-AS1Q8N1I8 211 aa13.59□□□□□ -0.23
UBA52-202ENST00000442744 TMX4Q9H1E5 349 aaPredicted RBP13.59□□□□□ -0.23
UBA52-202ENST00000442744 TMEM51Q9NW97 253 aa13.59□□□□□ -0.23
UBA52-202ENST00000442744 TDRD9Q8NDG6 1382 aaKnown RBP13.59□□□□□ -0.23
UBA52-202ENST00000442744 FMN1Q68DA7 1419 aa13.59□□□□□ -0.23
UBA52-202ENST00000442744 ZNF500O60304 480 aaPredicted RBP13.59□□□□□ -0.23
UBA52-202ENST00000442744 HSPA5P11021 654 aaKnown RBP13.59□□□□□ -0.23
UBA52-202ENST00000442744 LIG1P18858 919 aa13.59□□□□□ -0.23
UBA52-202ENST00000442744 FNBP4Q8N3X1 1017 aaPredicted RBP13.59□□□□□ -0.23
UBA52-202ENST00000442744 CUL7Q14999 1698 aa13.59□□□□□ -0.23
UBA52-202ENST00000442744 RGS3P49796 1198 aa13.59□□□□□ -0.23
UBA52-202ENST00000442744 RPGRIP1LQ68CZ1 1315 aa13.58□□□□□ -0.23
UBA52-202ENST00000442744 U2SURPO15042 1029 aaKnown RBP13.58□□□□□ -0.24
UBA52-202ENST00000442744 SKIV2LQ15477 1246 aaKnown RBP13.58□□□□□ -0.24
UBA52-202ENST00000442744 CSPP1Q1MSJ5 1256 aa13.58□□□□□ -0.24
UBA52-202ENST00000442744 NUB1Q9Y5A7 615 aa13.58□□□□□ -0.24
UBA52-202ENST00000442744 AK7Q96M32 723 aa13.58□□□□□ -0.24
UBA52-202ENST00000442744 DENND4BO75064 1496 aaPredicted RBP13.57□□□□□ -0.24
UBA52-202ENST00000442744 MYOM3Q5VTT5 1437 aa13.57□□□□□ -0.24
UBA52-202ENST00000442744 HDAC1Q13547 482 aaPredicted RBP13.57□□□□□ -0.24
UBA52-202ENST00000442744 HSP90AA2PQ14568 343 aaPredicted RBP13.57□□□□□ -0.24
UBA52-202ENST00000442744 PLEKHG3A1L390 1219 aa13.57□□□□□ -0.24
UBA52-202ENST00000442744 FRMD4BQ9Y2L6 1034 aa13.57□□□□□ -0.24
UBA52-202ENST00000442744 KDM6BO15054 1643 aa13.57□□□□□ -0.24
UBA52-202ENST00000442744 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.56□□□□□ -0.24
UBA52-202ENST00000442744 MAGI3Q5TCQ9 1506 aa13.56□□□□□ -0.24
UBA52-202ENST00000442744 SBNO2Q9Y2G9 1366 aa13.56□□□□□ -0.24
UBA52-202ENST00000442744 BDNFP23560 247 aa13.56□□□□□ -0.24
UBA52-202ENST00000442744 ZNF608Q9ULD9 1512 aaPredicted RBP13.55□□□□□ -0.24
UBA52-202ENST00000442744 C11orf95C9JLR9 678 aaPredicted RBP13.55□□□□□ -0.24
UBA52-202ENST00000442744 ARHGEF10LQ9HCE6 1279 aa13.55□□□□□ -0.24
UBA52-202ENST00000442744 PLSCR2Q9NRY7 297 aa13.55□□□□□ -0.24
UBA52-202ENST00000442744 TXNDC2Q86VQ3 553 aa13.54□□□□□ -0.24
UBA52-202ENST00000442744 ZNF513Q8N8E2 541 aaPredicted RBP13.54□□□□□ -0.24
UBA52-202ENST00000442744 KAT6BQ8WYB5 2073 aa13.54□□□□□ -0.24
UBA52-202ENST00000442744 WDHD1O75717 1129 aaPredicted RBP13.54□□□□□ -0.24
UBA52-202ENST00000442744 MSL3Q8N5Y2 521 aaKnown RBP13.54□□□□□ -0.24
UBA52-202ENST00000442744 TCERG1O14776 1098 aaKnown RBP13.54□□□□□ -0.24
UBA52-202ENST00000442744 GRIN2BQ13224 1484 aa13.53□□□□□ -0.24
UBA52-202ENST00000442744 EIF4G3O43432 1585 aaKnown RBP13.53□□□□□ -0.24
UBA52-202ENST00000442744 HSP90AB3PQ58FF7 597 aa13.53□□□□□ -0.24
UBA52-202ENST00000442744 GNL3LQ9NVN8 582 aaKnown RBP13.53□□□□□ -0.24
UBA52-202ENST00000442744 FAN1Q9Y2M0 1017 aa13.53□□□□□ -0.24
UBA52-202ENST00000442744 MCM6Q14566 821 aa13.53□□□□□ -0.24
UBA52-202ENST00000442744 DPH6Q7L8W6 267 aa13.53□□□□□ -0.24
UBA52-202ENST00000442744 C11orf96Q7Z7L8 435 aa13.53□□□□□ -0.24
UBA52-202ENST00000442744 SAMD9Q5K651 1589 aa13.52□□□□□ -0.24
UBA52-202ENST00000442744 STK10O94804 968 aaKnown RBP13.52□□□□□ -0.24
UBA52-202ENST00000442744 GYS2P54840 703 aa13.52□□□□□ -0.24
UBA52-202ENST00000442744 PDE4DQ08499 809 aa13.52□□□□□ -0.25
UBA52-202ENST00000442744 SETDB1Q15047 1291 aa13.52□□□□□ -0.25
UBA52-202ENST00000442744 SUPT6HQ7KZ85 1726 aaKnown RBP13.51□□□□□ -0.25
UBA52-202ENST00000442744 CCDC85AQ96PX6 553 aaPredicted RBP13.5□□□□□ -0.25
UBA52-202ENST00000442744 DMRT2Q9Y5R5 561 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms