RNA–Protein interactions for RNA: ENST00000436894.1

NCL-204, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-204ENST00000436894 MRPL50Q8N5N7 158 aaKnown RBP8.15□□□□□ -1.1
NCL-204ENST00000436894 CHD1O14646 1710 aa8.15□□□□□ -1.11
NCL-204ENST00000436894 DNMBPQ6XZF7 1577 aa8.14□□□□□ -1.11
NCL-204ENST00000436894 SPTLC1O15269 473 aa8.14□□□□□ -1.11
NCL-204ENST00000436894 DIXDC1Q155Q3 683 aa8.14□□□□□ -1.11
NCL-204ENST00000436894 LAPTM4BQ86VI4 370 aa8.14□□□□□ -1.11
NCL-204ENST00000436894 AQRO60306 1485 aaKnown RBP eCLIP8.13□□□□□ -1.111e-36■■■■■ 35.3
NCL-204ENST00000436894 HOXA2O43364 376 aa8.13□□□□□ -1.11
NCL-204ENST00000436894 RFC5P40937 340 aa8.13□□□□□ -1.11
NCL-204ENST00000436894 HDGFP51858 240 aaKnown RBP8.13□□□□□ -1.11
NCL-204ENST00000436894 CABLES1Q8TDN4 633 aa8.13□□□□□ -1.11
NCL-204ENST00000436894 CCDC88BA6NC98 1476 aa8.13□□□□□ -1.11
NCL-204ENST00000436894 TARBP1Q13395 1621 aaKnown RBP8.12□□□□□ -1.11
NCL-204ENST00000436894 CFHP08603 1231 aa8.12□□□□□ -1.11
NCL-204ENST00000436894 FUT2Q10981 343 aa8.12□□□□□ -1.11
NCL-204ENST00000436894 MCM6Q14566 821 aa8.12□□□□□ -1.11
NCL-204ENST00000436894 ZMYND15Q9H091 742 aa8.12□□□□□ -1.11
NCL-204ENST00000436894 PCDHGC3Q9UN70 934 aa8.12□□□□□ -1.11
NCL-204ENST00000436894 RTL5Q5HYW3 569 aaPredicted RBP8.11□□□□□ -1.11
NCL-204ENST00000436894 SLF2Q8IX21 1173 aa8.11□□□□□ -1.11
NCL-204ENST00000436894 WDR97A6NE52 1622 aa8.11□□□□□ -1.11
NCL-204ENST00000436894 FLIIQ13045 1269 aa8.1□□□□□ -1.11
NCL-204ENST00000436894 RSPH4AQ5TD94 716 aa8.1□□□□□ -1.11
NCL-204ENST00000436894 CHMP7Q8WUX9 453 aaPredicted RBP8.1□□□□□ -1.11
NCL-204ENST00000436894 CLUAP1Q96AJ1 413 aa8.1□□□□□ -1.11
NCL-204ENST00000436894 KRTAP3-3Q9BYR6 98 aa8.1□□□□□ -1.11
NCL-204ENST00000436894 KRTAP3-2Q9BYR7 98 aa8.1□□□□□ -1.11
NCL-204ENST00000436894 SNRKQ9NRH2 765 aa8.1□□□□□ -1.11
NCL-204ENST00000436894 LILRB3O75022 631 aa8.09□□□□□ -1.11
NCL-204ENST00000436894 FDX1P10109 184 aa8.09□□□□□ -1.11
NCL-204ENST00000436894 BCAMP50895 628 aa8.09□□□□□ -1.11
NCL-204ENST00000436894 PPP2R2DQ66LE6 453 aa8.09□□□□□ -1.11
NCL-204ENST00000436894 SYNJ1O43426 1573 aa8.09□□□□□ -1.11
NCL-204ENST00000436894 POLA1P09884 1462 aaPredicted RBP8.08□□□□□ -1.12
NCL-204ENST00000436894 HRCP23327 699 aa8.08□□□□□ -1.12
NCL-204ENST00000436894 USP46P62068 366 aa8.08□□□□□ -1.12
NCL-204ENST00000436894 PUS10Q3MIT2 529 aaKnown RBP8.08□□□□□ -1.12
NCL-204ENST00000436894 POM121Q96HA1 1249 aa8.08□□□□□ -1.12
NCL-204ENST00000436894 LRCH3Q96II8 777 aa8.08□□□□□ -1.12
NCL-204ENST00000436894 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.08□□□□□ -1.12
NCL-204ENST00000436894 SOGA1O94964 1423 aa8.08□□□□□ -1.12
NCL-204ENST00000436894 CLASP1Q7Z460 1538 aa8.08□□□□□ -1.12
NCL-204ENST00000436894 MAGI1Q96QZ7 1491 aaPredicted RBP8.07□□□□□ -1.12
NCL-204ENST00000436894 NUTM2BA6NNL0 878 aaPredicted RBP8.07□□□□□ -1.12
NCL-204ENST00000436894 NUTM2EB1AL46 878 aaPredicted RBP8.07□□□□□ -1.12
NCL-204ENST00000436894 TUSC1Q2TAM9 212 aa8.07□□□□□ -1.12
NCL-204ENST00000436894 NUTM2DQ5VT03 806 aaPredicted RBP8.07□□□□□ -1.12
NCL-204ENST00000436894 NUTM2AQ8IVF1 878 aaPredicted RBP8.07□□□□□ -1.12
NCL-204ENST00000436894 SYMPKQ92797 1274 aaKnown RBP8.07□□□□□ -1.12
NCL-204ENST00000436894 GJA5P36382 358 aa8.06□□□□□ -1.12
NCL-204ENST00000436894 SLC4A3P48751 1232 aa8.06□□□□□ -1.12
NCL-204ENST00000436894 TDRD9Q8NDG6 1382 aaKnown RBP8.06□□□□□ -1.12
NCL-204ENST00000436894 GOLGA8CPA6NN73 597 aa8.05□□□□□ -1.12
NCL-204ENST00000436894 UBTFP17480 764 aaKnown RBP8.05□□□□□ -1.12
NCL-204ENST00000436894 ANKK1Q8NFD2 765 aa8.05□□□□□ -1.12
NCL-204ENST00000436894 STAC3Q96MF2 364 aa8.05□□□□□ -1.12
NCL-204ENST00000436894 HPS5Q9UPZ3 1129 aa8.05□□□□□ -1.12
NCL-204ENST00000436894 SOWAHBA6NEL2 793 aa8.04□□□□□ -1.12
NCL-204ENST00000436894 AP1G2O75843 785 aa8.04□□□□□ -1.12
NCL-204ENST00000436894 ATP6V1AP38606 617 aa8.04□□□□□ -1.12
NCL-204ENST00000436894 APLP1P51693 650 aa8.04□□□□□ -1.12
NCL-204ENST00000436894 WNT2BQ93097 391 aa8.04□□□□□ -1.12
NCL-204ENST00000436894 ZBTB3Q9H5J0 574 aa8.04□□□□□ -1.12
NCL-204ENST00000436894 SYNJ2O15056 1496 aa8.04□□□□□ -1.12
NCL-204ENST00000436894 GRIN2BQ13224 1484 aa8.04□□□□□ -1.12
NCL-204ENST00000436894 SNAPC4Q5SXM2 1469 aa8.04□□□□□ -1.12
NCL-204ENST00000436894 GAPVD1Q14C86 1478 aa8.03□□□□□ -1.12
NCL-204ENST00000436894 RAD54L2Q9Y4B4 1467 aa8.03□□□□□ -1.12
NCL-204ENST00000436894 ARID3CA6NKF2 412 aa8.03□□□□□ -1.12
NCL-204ENST00000436894 PRPF38BQ5VTL8 546 aaKnown RBP8.03□□□□□ -1.12
NCL-204ENST00000436894 MTMR14Q8NCE2 650 aa8.03□□□□□ -1.12
NCL-204ENST00000436894 SPDYE5A6NIY4 337 aa8.02□□□□□ -1.13
NCL-204ENST00000436894 CFAP99D6REC4 459 aa8.02□□□□□ -1.13
NCL-204ENST00000436894 C6orf229H3BNL8 230 aa8.02□□□□□ -1.13
NCL-204ENST00000436894 ACTN4O43707 911 aaKnown RBP8.02□□□□□ -1.13
NCL-204ENST00000436894 PPP4CP60510 307 aa8.02□□□□□ -1.13
NCL-204ENST00000436894 MTMR2Q13614 643 aa8.02□□□□□ -1.13
NCL-204ENST00000436894 KMT5BQ4FZB7 885 aa8.02□□□□□ -1.13
NCL-204ENST00000436894 TMEM259Q4ZIN3 620 aa8.02□□□□□ -1.13
NCL-204ENST00000436894 MORN1Q5T089 497 aa8.02□□□□□ -1.13
NCL-204ENST00000436894 C1orf115Q9H7X2 142 aa8.02□□□□□ -1.13
NCL-204ENST00000436894 SLC27A5Q9Y2P5 690 aa8.02□□□□□ -1.13
NCL-204ENST00000436894 CTDSPL2Q05D32 466 aa8.01□□□□□ -1.13
NCL-204ENST00000436894 BANK1Q8NDB2 785 aa8.01□□□□□ -1.13
NCL-204ENST00000436894 TSC1Q92574 1164 aa8.01□□□□□ -1.13
NCL-204ENST00000436894 WBP1LQ9NX94 342 aa8.01□□□□□ -1.13
NCL-204ENST00000436894 USP17L8P0C7I0 530 aa8□□□□□ -1.13
NCL-204ENST00000436894 GRIPAP1Q4V328 841 aa8□□□□□ -1.13
NCL-204ENST00000436894 CDAN1Q8IWY9 1227 aa8□□□□□ -1.13
NCL-204ENST00000436894 TSR3Q9UJK0 312 aaKnown RBP8□□□□□ -1.13
NCL-204ENST00000436894 COG6Q9Y2V7 657 aa8□□□□□ -1.13
NCL-204ENST00000436894 BLOC1S3Q6QNY0 202 aa7.99□□□□□ -1.13
NCL-204ENST00000436894 RNF19BQ6ZMZ0 732 aa7.99□□□□□ -1.13
NCL-204ENST00000436894 HMX1Q9NP08 348 aaPredicted RBP7.99□□□□□ -1.13
NCL-204ENST00000436894 FGD5Q6ZNL6 1462 aa7.99□□□□□ -1.13
NCL-204ENST00000436894 A6NJR5 290 aa7.98□□□□□ -1.13
NCL-204ENST00000436894 LRRN4Q8WUT4 740 aa7.98□□□□□ -1.13
NCL-204ENST00000436894 KCTD12Q96CX2 325 aaKnown RBP7.98□□□□□ -1.13
NCL-204ENST00000436894 TRAK2O60296 914 aa7.97□□□□□ -1.13
NCL-204ENST00000436894 PRR7Q8TB68 274 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms