RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 SNAPC4Q5SXM2 1469 aa30.6■■■□□ 2.49
SPIRE1-202ENST00000409402 HFM1A2PYH4 1435 aa30.59■■■□□ 2.49
SPIRE1-202ENST00000409402 POGZQ7Z3K3 1410 aa30.59■■■□□ 2.49
SPIRE1-202ENST00000409402 PRM3Q9NNZ6 103 aa30.59■■■□□ 2.49
SPIRE1-202ENST00000409402 NEUROD6Q96NK8 337 aa30.58■■■□□ 2.49
SPIRE1-202ENST00000409402 MTHFSP49914 203 aa30.58■■■□□ 2.49
SPIRE1-202ENST00000409402 C9orf84Q5VXU9 1444 aa30.58■■■□□ 2.49
SPIRE1-202ENST00000409402 TPM2P07951 284 aa30.58■■■□□ 2.49
SPIRE1-202ENST00000409402 NFXL1Q6ZNB6 911 aa30.58■■■□□ 2.49
SPIRE1-202ENST00000409402 SLC52A1Q9NWF4 448 aa30.58■■■□□ 2.49
SPIRE1-202ENST00000409402 STRN4Q9NRL3 753 aa30.58■■■□□ 2.49
SPIRE1-202ENST00000409402 EFCAB5A4FU69 1503 aa30.57■■■□□ 2.49
SPIRE1-202ENST00000409402 PDE4CQ08493 712 aa30.57■■■□□ 2.48
SPIRE1-202ENST00000409402 UBTFL1P0CB47 393 aaPredicted RBP30.57■■■□□ 2.48
SPIRE1-202ENST00000409402 CWC22Q9HCG8 908 aaKnown RBP30.56■■■□□ 2.48
SPIRE1-202ENST00000409402 TOPBP1Q92547 1522 aa30.56■■■□□ 2.48
SPIRE1-202ENST00000409402 ANKLE2Q86XL3 938 aa30.56■■■□□ 2.48
SPIRE1-202ENST00000409402 PDE4AP27815 886 aa30.55■■■□□ 2.48
SPIRE1-202ENST00000409402 TSR1Q2NL82 804 aaKnown RBP30.55■■■□□ 2.48
SPIRE1-202ENST00000409402 TATP17735 454 aaPredicted RBP30.54■■■□□ 2.48
SPIRE1-202ENST00000409402 CCDC30Q5VVM6 783 aa30.54■■■□□ 2.48
SPIRE1-202ENST00000409402 KIF6Q6ZMV9 814 aa30.53■■■□□ 2.48
SPIRE1-202ENST00000409402 EHBP1L1Q8N3D4 1523 aa30.53■■■□□ 2.48
SPIRE1-202ENST00000409402 RBM42Q9BTD8 480 aaKnown RBP30.53■■■□□ 2.48
SPIRE1-202ENST00000409402 CCDC47Q96A33 483 aaKnown RBP30.52■■■□□ 2.48
SPIRE1-202ENST00000409402 CNTLNQ9NXG0 1405 aa30.52■■■□□ 2.48
SPIRE1-202ENST00000409402 DCAF8L1A6NGE4 600 aa30.52■■■□□ 2.48
SPIRE1-202ENST00000409402 ZNF692Q9BU19 519 aaPredicted RBP30.52■■■□□ 2.48
SPIRE1-202ENST00000409402 INTS3Q68E01 1043 aaKnown RBP30.51■■■□□ 2.47
SPIRE1-202ENST00000409402 TROQ12816 1431 aaPredicted RBP30.5■■■□□ 2.47
SPIRE1-202ENST00000409402 GOLGA6L19H0YKK7 550 aa30.5■■■□□ 2.47
SPIRE1-202ENST00000409402 CCDC27Q2M243 656 aa30.49■■■□□ 2.47
SPIRE1-202ENST00000409402 FOXD4L6Q3SYB3 417 aaPredicted RBP30.49■■■□□ 2.47
SPIRE1-202ENST00000409402 FOXD4L3Q6VB84 417 aaPredicted RBP30.49■■■□□ 2.47
SPIRE1-202ENST00000409402 CDK19Q9BWU1 502 aa30.49■■■□□ 2.47
SPIRE1-202ENST00000409402 WASHC4Q2M389 1173 aa30.49■■■□□ 2.47
SPIRE1-202ENST00000409402 RAPGEF3O95398 923 aa30.48■■■□□ 2.47
SPIRE1-202ENST00000409402 BECN2A8MW95 431 aa30.48■■■□□ 2.47
SPIRE1-202ENST00000409402 AAMPQ13685 434 aa30.48■■■□□ 2.47
SPIRE1-202ENST00000409402 A0A0U1RQG5 324 aaPredicted RBP30.47■■■□□ 2.47
SPIRE1-202ENST00000409402 TPM1P09493 284 aa30.47■■■□□ 2.47
SPIRE1-202ENST00000409402 DDX49Q9Y6V7 483 aaKnown RBP30.47■■■□□ 2.47
SPIRE1-202ENST00000409402 PRKAR2BP31323 418 aa30.46■■■□□ 2.47
SPIRE1-202ENST00000409402 SF3B2Q13435 895 aaKnown RBP30.46■■■□□ 2.47
SPIRE1-202ENST00000409402 POLA1P09884 1462 aaPredicted RBP30.46■■■□□ 2.47
SPIRE1-202ENST00000409402 HECW1Q76N89 1606 aa30.46■■■□□ 2.47
SPIRE1-202ENST00000409402 RALYLQ86SE5 291 aaKnown RBP30.46■■■□□ 2.47
SPIRE1-202ENST00000409402 HMGXB3Q12766 1538 aa30.45■■■□□ 2.47
SPIRE1-202ENST00000409402 BRD4O60885 1362 aaPredicted RBP30.45■■■□□ 2.47
SPIRE1-202ENST00000409402 NUTM2BA6NNL0 878 aaPredicted RBP30.45■■■□□ 2.47
SPIRE1-202ENST00000409402 NUTM2EB1AL46 878 aaPredicted RBP30.45■■■□□ 2.47
SPIRE1-202ENST00000409402 NUTM2AQ8IVF1 878 aaPredicted RBP30.45■■■□□ 2.47
SPIRE1-202ENST00000409402 WWC1Q8IX03 1113 aa30.45■■■□□ 2.47
SPIRE1-202ENST00000409402 SKOR2Q2VWA4 1001 aaPredicted RBP30.44■■■□□ 2.46
SPIRE1-202ENST00000409402 TOM1L2Q6ZVM7 507 aa30.44■■■□□ 2.46
SPIRE1-202ENST00000409402 GNAI3P08754 354 aa30.44■■■□□ 2.46
SPIRE1-202ENST00000409402 SYNJ1O43426 1573 aa30.44■■■□□ 2.46
SPIRE1-202ENST00000409402 FAM177BA6PVY3 158 aa30.43■■■□□ 2.46
SPIRE1-202ENST00000409402 FYB1O15117 783 aa30.43■■■□□ 2.46
SPIRE1-202ENST00000409402 TCP11L2Q8N4U5 519 aa30.43■■■□□ 2.46
SPIRE1-202ENST00000409402 ARAP1Q96P48 1450 aa30.43■■■□□ 2.46
SPIRE1-202ENST00000409402 CCDC43Q96MW1 224 aaKnown RBP30.42■■■□□ 2.46
SPIRE1-202ENST00000409402 ADAMTS8Q9UP79 889 aa30.42■■■□□ 2.46
SPIRE1-202ENST00000409402 KIAA1107Q9UPP5 1409 aa30.41■■■□□ 2.46
SPIRE1-202ENST00000409402 LNPKQ9C0E8 428 aa30.41■■■□□ 2.46
SPIRE1-202ENST00000409402 RPGRIP1LQ68CZ1 1315 aa30.41■■■□□ 2.46
SPIRE1-202ENST00000409402 CABP1Q9NZU7 370 aa30.41■■■□□ 2.46
SPIRE1-202ENST00000409402 HOOK1Q9UJC3 728 aaKnown RBP30.41■■■□□ 2.46
SPIRE1-202ENST00000409402 SAMD1Q6SPF0 538 aaPredicted RBP30.4■■■□□ 2.46
SPIRE1-202ENST00000409402 RTEL1-TNFRSF6BF6WH68 1400 aa30.4■■■□□ 2.46
SPIRE1-202ENST00000409402 NINLQ9Y2I6 1382 aa30.4■■■□□ 2.46
SPIRE1-202ENST00000409402 PPP2R1AP30153 589 aa30.4■■■□□ 2.46
SPIRE1-202ENST00000409402 SAFBQ15424 915 aaKnown RBP eCLIP30.4■■■□□ 2.46
SPIRE1-202ENST00000409402 TSHZ2Q9NRE2 1034 aa30.4■■■□□ 2.46
SPIRE1-202ENST00000409402 TBC1D2BQ9UPU7 963 aa30.4■■■□□ 2.46
SPIRE1-202ENST00000409402 CABP4P57796 275 aa30.39■■■□□ 2.46
SPIRE1-202ENST00000409402 SPG7Q9UQ90 795 aa30.39■■■□□ 2.46
SPIRE1-202ENST00000409402 GOLGA6L1Q8N7Z2 621 aa30.38■■■□□ 2.45
SPIRE1-202ENST00000409402 SLC26A8Q96RN1 970 aa30.38■■■□□ 2.45
SPIRE1-202ENST00000409402 NBPF1Q3BBV0 1214 aa30.37■■■□□ 2.45
SPIRE1-202ENST00000409402 CLASRPQ8N2M8 674 aaKnown RBP30.37■■■□□ 2.45
SPIRE1-202ENST00000409402 ANKRD20A12PQ8NF67 263 aa30.37■■■□□ 2.45
SPIRE1-202ENST00000409402 PANK1Q8TE04 598 aa30.36■■■□□ 2.45
SPIRE1-202ENST00000409402 PNISRQ8TF01 805 aaKnown RBP30.36■■■□□ 2.45
SPIRE1-202ENST00000409402 SMC3Q9UQE7 1217 aa30.36■■■□□ 2.45
SPIRE1-202ENST00000409402 CNTROBQ8N137 903 aa30.35■■■□□ 2.45
SPIRE1-202ENST00000409402 DDX54Q8TDD1 881 aaKnown RBP30.35■■■□□ 2.45
SPIRE1-202ENST00000409402 ERBINQ96RT1 1412 aa30.34■■■□□ 2.45
SPIRE1-202ENST00000409402 SLC12A5Q9H2X9 1139 aa30.34■■■□□ 2.45
SPIRE1-202ENST00000409402 DNMBPQ6XZF7 1577 aa30.34■■■□□ 2.45
SPIRE1-202ENST00000409402 PCMTD1Q96MG8 357 aaPredicted RBP30.34■■■□□ 2.45
SPIRE1-202ENST00000409402 FSD1Q9BTV5 496 aa30.34■■■□□ 2.45
SPIRE1-202ENST00000409402 SULT6B1Q6IMI4 303 aa30.33■■■□□ 2.45
SPIRE1-202ENST00000409402 BICD2Q8TD16 824 aa30.33■■■□□ 2.45
SPIRE1-202ENST00000409402 TWISTNBQ3B726 338 aaPredicted RBP30.33■■■□□ 2.45
SPIRE1-202ENST00000409402 SURF6O75683 361 aaKnown RBP30.33■■■□□ 2.45
SPIRE1-202ENST00000409402 ZNF530Q6P9A1 599 aaPredicted RBP30.32■■■□□ 2.44
SPIRE1-202ENST00000409402 PRDM11Q9NQV5 511 aa30.32■■■□□ 2.44
SPIRE1-202ENST00000409402 TOP2BQ02880 1626 aa30.32■■■□□ 2.44
SPIRE1-202ENST00000409402 VPS37CA5D8V6 355 aaPredicted RBP30.32■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms