RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 CCDC9Q9Y3X0 531 aaKnown RBP4.79□□□□□ -1.64
RGPD4-201ENST00000408999 MAP3K1Q13233 1512 aa4.79□□□□□ -1.64
RGPD4-201ENST00000408999 HSCBQ8IWL3 235 aa4.79□□□□□ -1.64
RGPD4-201ENST00000408999 ZNF710Q8N1W2 664 aa4.79□□□□□ -1.64
RGPD4-201ENST00000408999 KIF2CQ99661 725 aa4.79□□□□□ -1.64
RGPD4-201ENST00000408999 DNAJC5Q9H3Z4 198 aa4.79□□□□□ -1.64
RGPD4-201ENST00000408999 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.78□□□□□ -1.64
RGPD4-201ENST00000408999 AFAP1Q8N556 730 aa4.78□□□□□ -1.64
RGPD4-201ENST00000408999 RWDD1Q9H446 243 aaPredicted RBP4.78□□□□□ -1.64
RGPD4-201ENST00000408999 CCDC7Q96M83 1385 aa4.78□□□□□ -1.64
RGPD4-201ENST00000408999 TEX14Q8IWB6 1497 aa4.78□□□□□ -1.64
RGPD4-201ENST00000408999 ARHGEF11O15085 1522 aa4.78□□□□□ -1.64
RGPD4-201ENST00000408999 MCCP23508 829 aa4.78□□□□□ -1.64
RGPD4-201ENST00000408999 INHBEP58166 350 aa4.78□□□□□ -1.64
RGPD4-201ENST00000408999 STK31Q9BXU1 1019 aa4.78□□□□□ -1.64
RGPD4-201ENST00000408999 NAP1L2Q9ULW6 460 aaPredicted RBP4.78□□□□□ -1.64
RGPD4-201ENST00000408999 FRAT2O75474 233 aaPredicted RBP4.78□□□□□ -1.64
RGPD4-201ENST00000408999 CHRM1P11229 460 aaPredicted RBP4.78□□□□□ -1.64
RGPD4-201ENST00000408999 PRKRIP1Q9H875 184 aaPredicted RBP4.78□□□□□ -1.64
RGPD4-201ENST00000408999 HFM1A2PYH4 1435 aa4.78□□□□□ -1.64
RGPD4-201ENST00000408999 KIAA1107Q9UPP5 1409 aa4.78□□□□□ -1.64
RGPD4-201ENST00000408999 COL9A3Q14050 684 aaPredicted RBP4.78□□□□□ -1.64
RGPD4-201ENST00000408999 PMFBP1Q8TBY8 1022 aa4.78□□□□□ -1.64
RGPD4-201ENST00000408999 CTTNBP2Q8WZ74 1663 aa4.78□□□□□ -1.64
RGPD4-201ENST00000408999 KIF7Q2M1P5 1343 aa4.78□□□□□ -1.64
RGPD4-201ENST00000408999 SPRYD3Q8NCJ5 442 aa4.77□□□□□ -1.65
RGPD4-201ENST00000408999 KDM2BQ8NHM5 1336 aa4.77□□□□□ -1.65
RGPD4-201ENST00000408999 PDE3BQ13370 1112 aa4.77□□□□□ -1.65
RGPD4-201ENST00000408999 ERICH6BQ5W0A0 696 aa4.77□□□□□ -1.65
RGPD4-201ENST00000408999 ERBB3P21860 1342 aa4.77□□□□□ -1.65
RGPD4-201ENST00000408999 TNRC18O15417 2968 aaPredicted RBP4.77□□□□□ -1.65
RGPD4-201ENST00000408999 DNAJC5BQ9UF47 199 aa4.77□□□□□ -1.65
RGPD4-201ENST00000408999 ZRSR1Q15695 479 aaKnown RBP4.77□□□□□ -1.65
RGPD4-201ENST00000408999 TSC1Q92574 1164 aa4.77□□□□□ -1.65
RGPD4-201ENST00000408999 PLB1Q6P1J6 1458 aa4.77□□□□□ -1.65
RGPD4-201ENST00000408999 SCAPERQ9BY12 1400 aa4.77□□□□□ -1.65
RGPD4-201ENST00000408999 SLC4A10Q6U841 1118 aa4.76□□□□□ -1.65
RGPD4-201ENST00000408999 CFAP44Q96MT7 982 aa4.76□□□□□ -1.65
RGPD4-201ENST00000408999 CABP2Q9NPB3 220 aa4.76□□□□□ -1.65
RGPD4-201ENST00000408999 ZZEF1O43149 2961 aa4.76□□□□□ -1.65
RGPD4-201ENST00000408999 CLUAP1Q96AJ1 413 aa4.76□□□□□ -1.65
RGPD4-201ENST00000408999 TRIM44Q96DX7 344 aaPredicted RBP4.76□□□□□ -1.65
RGPD4-201ENST00000408999 CHMP3Q9Y3E7 222 aa4.76□□□□□ -1.65
RGPD4-201ENST00000408999 LRPPRCP42704 1394 aaKnown RBP4.76□□□□□ -1.65
RGPD4-201ENST00000408999 CCDC141Q6ZP82 1450 aa4.76□□□□□ -1.65
RGPD4-201ENST00000408999 CD2BP2O95400 341 aaKnown RBP4.76□□□□□ -1.65
RGPD4-201ENST00000408999 C1orf141Q5JVX7 400 aa4.75□□□□□ -1.65
RGPD4-201ENST00000408999 TMEM132EQ6IEE7 984 aa4.75□□□□□ -1.65
RGPD4-201ENST00000408999 ZBED9Q6R2W3 1325 aa4.75□□□□□ -1.65
RGPD4-201ENST00000408999 MBD5Q9P267 1494 aa4.75□□□□□ -1.65
RGPD4-201ENST00000408999 E9PSI1 815 aa4.75□□□□□ -1.65
RGPD4-201ENST00000408999 ERBINQ96RT1 1412 aa4.75□□□□□ -1.65
RGPD4-201ENST00000408999 RAPGEF6Q8TEU7 1601 aa4.75□□□□□ -1.65
RGPD4-201ENST00000408999 DIAPH1O60610 1272 aaKnown RBP4.75□□□□□ -1.65
RGPD4-201ENST00000408999 XRCC6P12956 609 aaKnown RBP eCLIP4.75□□□□□ -1.65
RGPD4-201ENST00000408999 PTMAP06454 111 aaKnown RBP4.75□□□□□ -1.65
RGPD4-201ENST00000408999 CDK11BP21127 795 aaKnown RBP4.75□□□□□ -1.65
RGPD4-201ENST00000408999 ROCK1Q13464 1354 aa4.74□□□□□ -1.65
RGPD4-201ENST00000408999 TCERG1O14776 1098 aaKnown RBP4.74□□□□□ -1.65
RGPD4-201ENST00000408999 PNISRQ8TF01 805 aaKnown RBP4.74□□□□□ -1.65
RGPD4-201ENST00000408999 GPATCH3Q96I76 525 aa4.74□□□□□ -1.65
RGPD4-201ENST00000408999 KNDC1Q76NI1 1749 aa4.74□□□□□ -1.65
RGPD4-201ENST00000408999 RRP1P56182 461 aaKnown RBP4.74□□□□□ -1.65
RGPD4-201ENST00000408999 PSME1Q06323 249 aa4.74□□□□□ -1.65
RGPD4-201ENST00000408999 CHMP4AQ9BY43 222 aa4.74□□□□□ -1.65
RGPD4-201ENST00000408999 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.74□□□□□ -1.65
RGPD4-201ENST00000408999 PLIN1O60240 522 aa4.74□□□□□ -1.65
RGPD4-201ENST00000408999 HMMRO75330 724 aa4.74□□□□□ -1.65
RGPD4-201ENST00000408999 MFAP1P55081 439 aaKnown RBP4.74□□□□□ -1.65
RGPD4-201ENST00000408999 KIAA1211Q6ZU35 1233 aa4.74□□□□□ -1.65
RGPD4-201ENST00000408999 BACH2Q9BYV9 841 aa4.74□□□□□ -1.65
RGPD4-201ENST00000408999 FAM135AQ9P2D6 1515 aa4.74□□□□□ -1.65
RGPD4-201ENST00000408999 CAPN2P17655 700 aa4.74□□□□□ -1.65
RGPD4-201ENST00000408999 EVA1CP58658 441 aa4.74□□□□□ -1.65
RGPD4-201ENST00000408999 BCL2L13Q9BXK5 485 aa4.74□□□□□ -1.65
RGPD4-201ENST00000408999 ADAMTS12P58397 1594 aa4.73□□□□□ -1.65
RGPD4-201ENST00000408999 TULP1O00294 542 aaPredicted RBP4.73□□□□□ -1.65
RGPD4-201ENST00000408999 TAF7LQ5H9L4 462 aa4.73□□□□□ -1.65
RGPD4-201ENST00000408999 ABCC5O15440 1437 aa4.73□□□□□ -1.65
RGPD4-201ENST00000408999 NCOA1Q15788 1441 aa4.73□□□□□ -1.65
RGPD4-201ENST00000408999 ADGRL1O94910 1474 aa4.73□□□□□ -1.65
RGPD4-201ENST00000408999 TRIM6-TRIM34B2RNG4 842 aa4.73□□□□□ -1.65
RGPD4-201ENST00000408999 FANCGO15287 622 aa4.73□□□□□ -1.65
RGPD4-201ENST00000408999 CFAP70Q5T0N1 1121 aa4.73□□□□□ -1.65
RGPD4-201ENST00000408999 CRBNQ96SW2 442 aa4.73□□□□□ -1.65
RGPD4-201ENST00000408999 ELL2O00472 640 aaPredicted RBP4.73□□□□□ -1.65
RGPD4-201ENST00000408999 APAF1O14727 1248 aa4.73□□□□□ -1.65
RGPD4-201ENST00000408999 RUNDC1Q96C34 613 aa4.73□□□□□ -1.65
RGPD4-201ENST00000408999 CDCA7LQ96GN5 454 aa4.73□□□□□ -1.65
RGPD4-201ENST00000408999 TNNQ9UQP3 1299 aa4.73□□□□□ -1.65
RGPD4-201ENST00000408999 PBRM1Q86U86 1689 aa4.73□□□□□ -1.65
RGPD4-201ENST00000408999 ITSN2Q9NZM3 1697 aa4.73□□□□□ -1.65
RGPD4-201ENST00000408999 COL12A1Q99715 3063 aa4.72□□□□□ -1.65
RGPD4-201ENST00000408999 NAIPQ13075 1403 aa4.72□□□□□ -1.65
RGPD4-201ENST00000408999 RAPGEF3O95398 923 aa4.72□□□□□ -1.65
RGPD4-201ENST00000408999 GORABQ5T7V8 394 aa4.72□□□□□ -1.65
RGPD4-201ENST00000408999 ZKSCAN2Q63HK3 967 aa4.72□□□□□ -1.65
RGPD4-201ENST00000408999 GGNBP2Q9H3C7 697 aa4.72□□□□□ -1.65
RGPD4-201ENST00000408999 PODXL2Q9NZ53 605 aa4.72□□□□□ -1.65
RGPD4-201ENST00000408999 TACC2O95359 2948 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms