RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 MTMR7Q9Y216 660 aa13.32□□□□□ -0.28
LINC00654-201ENST00000379053 TOM1L2Q6ZVM7 507 aa13.32□□□□□ -0.28
LINC00654-201ENST00000379053 R3HCC1Q9Y3T6 440 aaKnown RBP13.32□□□□□ -0.28
LINC00654-201ENST00000379053 FGD5Q6ZNL6 1462 aa13.32□□□□□ -0.28
LINC00654-201ENST00000379053 RUNDC1Q96C34 613 aa13.32□□□□□ -0.28
LINC00654-201ENST00000379053 TATP17735 454 aaPredicted RBP13.32□□□□□ -0.28
LINC00654-201ENST00000379053 DZIP1LQ8IYY4 767 aaKnown RBP13.32□□□□□ -0.28
LINC00654-201ENST00000379053 GOLGA6L19H0YKK7 550 aa13.31□□□□□ -0.28
LINC00654-201ENST00000379053 RALYLQ86SE5 291 aaKnown RBP13.31□□□□□ -0.28
LINC00654-201ENST00000379053 ERC2O15083 957 aa13.31□□□□□ -0.28
LINC00654-201ENST00000379053 ARID3AQ99856 593 aa13.31□□□□□ -0.28
LINC00654-201ENST00000379053 GOLGA6L3A6NEY3 463 aa13.31□□□□□ -0.28
LINC00654-201ENST00000379053 CENPQQ7L2Z9 268 aaPredicted RBP13.3□□□□□ -0.28
LINC00654-201ENST00000379053 DDX54Q8TDD1 881 aaKnown RBP13.3□□□□□ -0.28
LINC00654-201ENST00000379053 UBTFL1P0CB47 393 aaPredicted RBP13.3□□□□□ -0.28
LINC00654-201ENST00000379053 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.29□□□□□ -0.28
LINC00654-201ENST00000379053 SLC4A3P48751 1232 aa13.29□□□□□ -0.28
LINC00654-201ENST00000379053 SAFBQ15424 915 aaKnown RBP eCLIP13.29□□□□□ -0.28
LINC00654-201ENST00000379053 ANKRD20A12PQ8NF67 263 aa13.29□□□□□ -0.28
LINC00654-201ENST00000379053 GAS2L2Q8NHY3 880 aa13.29□□□□□ -0.28
LINC00654-201ENST00000379053 SMG6Q86US8 1419 aaKnown RBP13.29□□□□□ -0.28
LINC00654-201ENST00000379053 TBC1D2BQ9UPU7 963 aa13.28□□□□□ -0.28
LINC00654-201ENST00000379053 ARHGAP5Q13017 1502 aa13.28□□□□□ -0.28
LINC00654-201ENST00000379053 PRKRIP1Q9H875 184 aaPredicted RBP13.28□□□□□ -0.28
LINC00654-201ENST00000379053 PRDM11Q9NQV5 511 aa13.28□□□□□ -0.28
LINC00654-201ENST00000379053 TSHZ2Q9NRE2 1034 aa13.28□□□□□ -0.28
LINC00654-201ENST00000379053 IPO7O95373 1038 aaKnown RBP13.27□□□□□ -0.28
LINC00654-201ENST00000379053 HOOK1Q9UJC3 728 aaKnown RBP13.27□□□□□ -0.29
LINC00654-201ENST00000379053 IGF1RP08069 1367 aa13.26□□□□□ -0.29
LINC00654-201ENST00000379053 PRAM1Q96QH2 718 aa13.26□□□□□ -0.29
LINC00654-201ENST00000379053 CRBNQ96SW2 442 aa13.26□□□□□ -0.29
LINC00654-201ENST00000379053 PRG4Q92954 1404 aaPredicted RBP13.26□□□□□ -0.29
LINC00654-201ENST00000379053 CABP4P57796 275 aa13.26□□□□□ -0.29
LINC00654-201ENST00000379053 SMARCA4P51532 1647 aa13.25□□□□□ -0.29
LINC00654-201ENST00000379053 FOSBP53539 338 aa13.25□□□□□ -0.29
LINC00654-201ENST00000379053 NBPF8Q3BBV2 869 aa13.25□□□□□ -0.29
LINC00654-201ENST00000379053 NBPF14Q5TI25 921 aa13.25□□□□□ -0.29
LINC00654-201ENST00000379053 CFAP70Q5T0N1 1121 aa13.25□□□□□ -0.29
LINC00654-201ENST00000379053 NGLY1Q96IV0 654 aa13.25□□□□□ -0.29
LINC00654-201ENST00000379053 ANKRD50Q9ULJ7 1429 aa13.25□□□□□ -0.29
LINC00654-201ENST00000379053 CCDC30Q5VVM6 783 aa13.25□□□□□ -0.29
LINC00654-201ENST00000379053 CCAR2Q8N163 923 aaKnown RBP13.25□□□□□ -0.29
LINC00654-201ENST00000379053 BRMS1Q9HCU9 246 aa13.25□□□□□ -0.29
LINC00654-201ENST00000379053 CNNM1Q9NRU3 951 aa13.25□□□□□ -0.29
LINC00654-201ENST00000379053 TMEM132AQ24JP5 1023 aa13.24□□□□□ -0.29
LINC00654-201ENST00000379053 BICD2Q8TD16 824 aa13.24□□□□□ -0.29
LINC00654-201ENST00000379053 FBXO3Q9UK99 471 aa13.24□□□□□ -0.29
LINC00654-201ENST00000379053 MRC2Q9UBG0 1479 aa13.24□□□□□ -0.29
LINC00654-201ENST00000379053 SLC26A8Q96RN1 970 aa13.24□□□□□ -0.29
LINC00654-201ENST00000379053 DDX49Q9Y6V7 483 aaKnown RBP13.24□□□□□ -0.29
LINC00654-201ENST00000379053 TNNT3P45378 269 aaPredicted RBP13.24□□□□□ -0.29
LINC00654-201ENST00000379053 RRP1P56182 461 aaKnown RBP13.24□□□□□ -0.29
LINC00654-201ENST00000379053 DDX11L8A8MPP1 907 aa13.24□□□□□ -0.29
LINC00654-201ENST00000379053 GNL3LQ9NVN8 582 aaKnown RBP13.24□□□□□ -0.29
LINC00654-201ENST00000379053 PRDM2Q13029 1718 aa13.23□□□□□ -0.29
LINC00654-201ENST00000379053 VPS37CA5D8V6 355 aaPredicted RBP13.23□□□□□ -0.29
LINC00654-201ENST00000379053 FAM161AQ3B820 660 aa13.23□□□□□ -0.29
LINC00654-201ENST00000379053 EXOC6Q8TAG9 804 aa13.23□□□□□ -0.29
LINC00654-201ENST00000379053 SART3Q15020 963 aaKnown RBP13.23□□□□□ -0.29
LINC00654-201ENST00000379053 FSD1Q9BTV5 496 aa13.23□□□□□ -0.29
LINC00654-201ENST00000379053 SLC3A2P08195 630 aaKnown RBP13.22□□□□□ -0.29
LINC00654-201ENST00000379053 XBP1P17861 261 aa13.22□□□□□ -0.29
LINC00654-201ENST00000379053 SPG7Q9UQ90 795 aa13.22□□□□□ -0.29
LINC00654-201ENST00000379053 SYNJ2O15056 1496 aa13.22□□□□□ -0.29
LINC00654-201ENST00000379053 MTHFSP49914 203 aa13.22□□□□□ -0.29
LINC00654-201ENST00000379053 CT47A1Q5JQC4 288 aaPredicted RBP13.22□□□□□ -0.29
LINC00654-201ENST00000379053 DNAJC2Q99543 621 aaKnown RBP13.22□□□□□ -0.29
LINC00654-201ENST00000379053 WWC2Q6AWC2 1192 aa13.22□□□□□ -0.29
LINC00654-201ENST00000379053 CLASRPQ8N2M8 674 aaKnown RBP13.22□□□□□ -0.29
LINC00654-201ENST00000379053 RBM5P52756 815 aaKnown RBP eCLIP13.21□□□□□ -0.29
LINC00654-201ENST00000379053 ATP2B2Q01814 1243 aa13.21□□□□□ -0.29
LINC00654-201ENST00000379053 CCDC70Q6NSX1 233 aa13.21□□□□□ -0.29
LINC00654-201ENST00000379053 RUSC2Q8N2Y8 1516 aa13.21□□□□□ -0.29
LINC00654-201ENST00000379053 GRIN2BQ13224 1484 aa13.21□□□□□ -0.29
LINC00654-201ENST00000379053 INTS3Q68E01 1043 aaKnown RBP13.21□□□□□ -0.29
LINC00654-201ENST00000379053 IPO9Q96P70 1041 aaKnown RBP13.21□□□□□ -0.29
LINC00654-201ENST00000379053 SMC3Q9UQE7 1217 aa13.21□□□□□ -0.29
LINC00654-201ENST00000379053 RAPGEF3O95398 923 aa13.21□□□□□ -0.3
LINC00654-201ENST00000379053 ZNF530Q6P9A1 599 aaPredicted RBP13.21□□□□□ -0.3
LINC00654-201ENST00000379053 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.21□□□□□ -0.3
LINC00654-201ENST00000379053 RRBP1Q9P2E9 1410 aaKnown RBP13.21□□□□□ -0.3
LINC00654-201ENST00000379053 FYCO1Q9BQS8 1478 aa13.2□□□□□ -0.3
LINC00654-201ENST00000379053 SURF6O75683 361 aaKnown RBP13.2□□□□□ -0.3
LINC00654-201ENST00000379053 GNAI3P08754 354 aa13.2□□□□□ -0.3
LINC00654-201ENST00000379053 PRKAR2BP31323 418 aa13.2□□□□□ -0.3
LINC00654-201ENST00000379053 ODF2Q5BJF6 829 aa13.2□□□□□ -0.3
LINC00654-201ENST00000379053 XPCQ01831 940 aaPredicted RBP13.2□□□□□ -0.3
LINC00654-201ENST00000379053 LNPKQ9C0E8 428 aa13.2□□□□□ -0.3
LINC00654-201ENST00000379053 KDM4AO75164 1064 aa13.2□□□□□ -0.3
LINC00654-201ENST00000379053 SCAPERQ9BY12 1400 aa13.19□□□□□ -0.3
LINC00654-201ENST00000379053 ZNF692Q9BU19 519 aaPredicted RBP13.19□□□□□ -0.3
LINC00654-201ENST00000379053 RRP12Q5JTH9 1297 aaKnown RBP13.19□□□□□ -0.3
LINC00654-201ENST00000379053 CDK19Q9BWU1 502 aa13.19□□□□□ -0.3
LINC00654-201ENST00000379053 PPP6R1Q9UPN7 881 aa13.19□□□□□ -0.3
LINC00654-201ENST00000379053 HSP90AA2PQ14568 343 aaPredicted RBP13.18□□□□□ -0.3
LINC00654-201ENST00000379053 PAF1Q8N7H5 531 aa13.18□□□□□ -0.3
LINC00654-201ENST00000379053 TTC39AQ5SRH9 613 aa13.18□□□□□ -0.3
LINC00654-201ENST00000379053 SLC52A1Q9NWF4 448 aa13.18□□□□□ -0.3
LINC00654-201ENST00000379053 NINLQ9Y2I6 1382 aa13.18□□□□□ -0.3
LINC00654-201ENST00000379053 FGD6Q6ZV73 1430 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms