RNA–Protein interactions for RNA: ENST00000377885.6

RNF38-206, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 4,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-206ENST00000377885 ESPNB1AK53 854 aa12.5□□□□□ -0.41
RNF38-206ENST00000377885 CYB5RLQ6IPT4 315 aa12.5□□□□□ -0.41
RNF38-206ENST00000377885 MAGI2Q86UL8 1455 aa12.5□□□□□ -0.41
RNF38-206ENST00000377885 ZMYM3Q14202 1370 aa12.5□□□□□ -0.41
RNF38-206ENST00000377885 ABCC2Q92887 1545 aa12.49□□□□□ -0.41
RNF38-206ENST00000377885 PCDHB15Q9Y5E8 787 aa12.49□□□□□ -0.41
RNF38-206ENST00000377885 CIZ1Q9ULV3 898 aaPredicted RBP12.49□□□□□ -0.41
RNF38-206ENST00000377885 CFAP70Q5T0N1 1121 aa12.49□□□□□ -0.41
RNF38-206ENST00000377885 CASC1Q6TDU7 716 aa12.49□□□□□ -0.41
RNF38-206ENST00000377885 TPM2P07951 284 aa12.48□□□□□ -0.41
RNF38-206ENST00000377885 KIF3BO15066 747 aa12.48□□□□□ -0.41
RNF38-206ENST00000377885 PKNOX2Q96KN3 472 aa12.48□□□□□ -0.41
RNF38-206ENST00000377885 DUOX2Q9NRD8 1548 aa12.47□□□□□ -0.41
RNF38-206ENST00000377885 MTHFSP49914 203 aa12.47□□□□□ -0.41
RNF38-206ENST00000377885 FOXD4L1Q9NU39 408 aa12.47□□□□□ -0.41
RNF38-206ENST00000377885 LAMC1P11047 1609 aa12.47□□□□□ -0.41
RNF38-206ENST00000377885 WDR7Q9Y4E6 1490 aa12.47□□□□□ -0.41
RNF38-206ENST00000377885 CHD1O14646 1710 aa12.47□□□□□ -0.41
RNF38-206ENST00000377885 SYCP2Q9BX26 1530 aa12.47□□□□□ -0.41
RNF38-206ENST00000377885 TRAK1Q9UPV9 953 aa12.47□□□□□ -0.41
RNF38-206ENST00000377885 POLR3AO14802 1390 aaPredicted RBP12.47□□□□□ -0.41
RNF38-206ENST00000377885 USP19O94966 1318 aa12.47□□□□□ -0.41
RNF38-206ENST00000377885 CLASP1Q7Z460 1538 aa12.47□□□□□ -0.41
RNF38-206ENST00000377885 DDX49Q9Y6V7 483 aaKnown RBP12.46□□□□□ -0.41
RNF38-206ENST00000377885 KIF16BQ96L93 1317 aa12.46□□□□□ -0.41
RNF38-206ENST00000377885 SYNMO15061 1565 aa12.46□□□□□ -0.41
RNF38-206ENST00000377885 CALD1Q05682 793 aaKnown RBP12.46□□□□□ -0.42
RNF38-206ENST00000377885 PANK2Q9BZ23 570 aa12.46□□□□□ -0.42
RNF38-206ENST00000377885 CDC42BPAQ5VT25 1732 aa12.46□□□□□ -0.42
RNF38-206ENST00000377885 ANTXR1Q9H6X2 564 aa12.45□□□□□ -0.42
RNF38-206ENST00000377885 CCDC173Q0VFZ6 552 aa12.45□□□□□ -0.42
RNF38-206ENST00000377885 ANKRD45Q5TZF3 282 aa12.44□□□□□ -0.42
RNF38-206ENST00000377885 LNPKQ9C0E8 428 aa12.44□□□□□ -0.42
RNF38-206ENST00000377885 NSD3Q9BZ95 1437 aa12.44□□□□□ -0.42
RNF38-206ENST00000377885 NASPP49321 788 aaPredicted RBP12.44□□□□□ -0.42
RNF38-206ENST00000377885 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.44□□□□□ -0.42
RNF38-206ENST00000377885 DMRT2Q9Y5R5 561 aa12.44□□□□□ -0.42
RNF38-206ENST00000377885 PLA2R1Q13018 1463 aa12.44□□□□□ -0.42
RNF38-206ENST00000377885 EXOSC9Q06265 439 aaKnown RBP12.43□□□□□ -0.42
RNF38-206ENST00000377885 ATF7IPQ6VMQ6 1270 aa12.43□□□□□ -0.42
RNF38-206ENST00000377885 PTMAP06454 111 aaKnown RBP12.43□□□□□ -0.42
RNF38-206ENST00000377885 RLBP1P12271 317 aa12.43□□□□□ -0.42
RNF38-206ENST00000377885 MAST1Q9Y2H9 1570 aa12.42□□□□□ -0.42
RNF38-206ENST00000377885 EVC2Q86UK5 1308 aa12.42□□□□□ -0.42
RNF38-206ENST00000377885 FSD2A1L4K1 749 aa12.42□□□□□ -0.42
RNF38-206ENST00000377885 CCDC27Q2M243 656 aa12.42□□□□□ -0.42
RNF38-206ENST00000377885 HDAC1Q13547 482 aaPredicted RBP12.42□□□□□ -0.42
RNF38-206ENST00000377885 TSR2Q969E8 191 aaKnown RBP12.41□□□□□ -0.42
RNF38-206ENST00000377885 SLC12A5Q9H2X9 1139 aa12.41□□□□□ -0.42
RNF38-206ENST00000377885 SRPK2P78362 688 aaKnown RBP12.41□□□□□ -0.42
RNF38-206ENST00000377885 TNPO1Q92973 898 aaKnown RBP12.41□□□□□ -0.42
RNF38-206ENST00000377885 NOB1Q9ULX3 412 aaKnown RBP12.41□□□□□ -0.42
RNF38-206ENST00000377885 ABCA8O94911 1581 aa12.4□□□□□ -0.42
RNF38-206ENST00000377885 K7ELQ4 463 aaPredicted RBP12.4□□□□□ -0.42
RNF38-206ENST00000377885 NUCB2P80303 420 aa12.4□□□□□ -0.42
RNF38-206ENST00000377885 SAMD9LQ8IVG5 1584 aa12.4□□□□□ -0.42
RNF38-206ENST00000377885 TNNQ9UQP3 1299 aa12.4□□□□□ -0.42
RNF38-206ENST00000377885 SNX21Q969T3 373 aa12.39□□□□□ -0.43
RNF38-206ENST00000377885 CARD14Q9BXL6 1004 aa12.39□□□□□ -0.43
RNF38-206ENST00000377885 RIPK4P57078 832 aa12.39□□□□□ -0.43
RNF38-206ENST00000377885 CHD1LQ86WJ1 897 aa12.39□□□□□ -0.43
RNF38-206ENST00000377885 ATP10AO60312 1499 aa12.39□□□□□ -0.43
RNF38-206ENST00000377885 GCC1Q96CN9 775 aa12.39□□□□□ -0.43
RNF38-206ENST00000377885 KDM5AP29375 1690 aaKnown RBP12.39□□□□□ -0.43
RNF38-206ENST00000377885 UNC13BO14795 1591 aa12.38□□□□□ -0.43
RNF38-206ENST00000377885 TRIM27P14373 513 aa12.38□□□□□ -0.43
RNF38-206ENST00000377885 DNTTIP2Q5QJE6 756 aaKnown RBP12.38□□□□□ -0.43
RNF38-206ENST00000377885 TERF2IPQ9NYB0 399 aa12.38□□□□□ -0.43
RNF38-206ENST00000377885 ST18O60284 1047 aa12.38□□□□□ -0.43
RNF38-206ENST00000377885 AFAP1Q8N556 730 aa12.38□□□□□ -0.43
RNF38-206ENST00000377885 CDC45O75419 566 aa12.37□□□□□ -0.43
RNF38-206ENST00000377885 ZSCAN30Q86W11 494 aa12.37□□□□□ -0.43
RNF38-206ENST00000377885 KIAA1211Q6ZU35 1233 aa12.37□□□□□ -0.43
RNF38-206ENST00000377885 TMEM57Q8N5G2 664 aa12.37□□□□□ -0.43
RNF38-206ENST00000377885 SSH1Q8WYL5 1049 aa12.37□□□□□ -0.43
RNF38-206ENST00000377885 IQGAP3Q86VI3 1631 aa12.37□□□□□ -0.43
RNF38-206ENST00000377885 SAFB2Q14151 953 aaKnown RBP eCLIP12.37□□□□□ -0.43
RNF38-206ENST00000377885 SMC5Q8IY18 1101 aa12.37□□□□□ -0.43
RNF38-206ENST00000377885 MAP7D2Q96T17 732 aa12.36□□□□□ -0.43
RNF38-206ENST00000377885 HDGFL2Q7Z4V5 671 aaPredicted RBP12.36□□□□□ -0.43
RNF38-206ENST00000377885 MCTP1Q6DN14 999 aa12.36□□□□□ -0.43
RNF38-206ENST00000377885 ADGRF5Q8IZF2 1346 aa12.36□□□□□ -0.43
RNF38-206ENST00000377885 CSPP1Q1MSJ5 1256 aa12.36□□□□□ -0.43
RNF38-206ENST00000377885 PREX2Q70Z35 1606 aa12.35□□□□□ -0.43
RNF38-206ENST00000377885 DIAPH1O60610 1272 aaKnown RBP12.35□□□□□ -0.43
RNF38-206ENST00000377885 RABEP1Q15276 862 aa12.35□□□□□ -0.43
RNF38-206ENST00000377885 TMPOP42166 694 aaKnown RBP12.35□□□□□ -0.43
RNF38-206ENST00000377885 BMP2KLQ5H9B9 411 aa12.35□□□□□ -0.43
RNF38-206ENST00000377885 ABCC11Q96J66 1382 aa12.34□□□□□ -0.43
RNF38-206ENST00000377885 RBM25P49756 843 aaKnown RBP12.34□□□□□ -0.43
RNF38-206ENST00000377885 RAB3GAP1Q15042 981 aa12.34□□□□□ -0.43
RNF38-206ENST00000377885 NCBP3Q53F19 620 aaKnown RBP12.34□□□□□ -0.43
RNF38-206ENST00000377885 NUCB1Q02818 461 aa12.34□□□□□ -0.43
RNF38-206ENST00000377885 SYAP1Q96A49 352 aaPredicted RBP12.34□□□□□ -0.43
RNF38-206ENST00000377885 PDCL3Q9H2J4 239 aa12.34□□□□□ -0.43
RNF38-206ENST00000377885 HAP1P54257 671 aaPredicted RBP12.34□□□□□ -0.43
RNF38-206ENST00000377885 ZMYND15Q9H091 742 aa12.34□□□□□ -0.43
RNF38-206ENST00000377885 TTC37Q6PGP7 1564 aa12.33□□□□□ -0.44
RNF38-206ENST00000377885 NSD2O96028 1365 aa12.33□□□□□ -0.44
RNF38-206ENST00000377885 PLXNC1O60486 1568 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms