RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 TMEM94Q12767 1356 aa16.31■□□□□ 0.2
HMGCL-202ENST00000374487 TMEM132EQ6IEE7 984 aa16.3■□□□□ 0.2
HMGCL-202ENST00000374487 PER1O15534 1290 aaPredicted RBP16.29■□□□□ 0.2
HMGCL-202ENST00000374487 PANK3Q9H999 370 aa16.29■□□□□ 0.2
HMGCL-202ENST00000374487 PIP4K2BP78356 416 aa16.28■□□□□ 0.2
HMGCL-202ENST00000374487 NLRP13Q86W25 1043 aa16.28■□□□□ 0.2
HMGCL-202ENST00000374487 IFT172Q9UG01 1749 aa16.28■□□□□ 0.2
HMGCL-202ENST00000374487 ALKQ9UM73 1620 aa16.28■□□□□ 0.2
HMGCL-202ENST00000374487 CHD2O14647 1828 aaKnown RBP16.28■□□□□ 0.2
HMGCL-202ENST00000374487 XIRP1Q702N8 1843 aaKnown RBP16.28■□□□□ 0.2
HMGCL-202ENST00000374487 CFAP70Q5T0N1 1121 aa16.27■□□□□ 0.2
HMGCL-202ENST00000374487 TSHZ2Q9NRE2 1034 aa16.27■□□□□ 0.2
HMGCL-202ENST00000374487 CDCA8Q53HL2 280 aa16.27■□□□□ 0.19
HMGCL-202ENST00000374487 PARD3Q8TEW0 1356 aa16.26■□□□□ 0.19
HMGCL-202ENST00000374487 CC2D1BQ5T0F9 858 aaKnown RBP16.26■□□□□ 0.19
HMGCL-202ENST00000374487 ERICH6BQ5W0A0 696 aa16.26■□□□□ 0.19
HMGCL-202ENST00000374487 STK26Q9P289 416 aa16.26■□□□□ 0.19
HMGCL-202ENST00000374487 NWD1Q149M9 1564 aa16.26■□□□□ 0.19
HMGCL-202ENST00000374487 MYOM2P54296 1465 aa16.25■□□□□ 0.19
HMGCL-202ENST00000374487 SETD1AO15047 1707 aaKnown RBP16.24■□□□□ 0.19
HMGCL-202ENST00000374487 PIK3C2GO75747 1445 aa16.24■□□□□ 0.19
HMGCL-202ENST00000374487 DIP2AQ14689 1571 aa16.24■□□□□ 0.19
HMGCL-202ENST00000374487 EIF3AQ14152 1382 aaKnown RBP16.24■□□□□ 0.19
HMGCL-202ENST00000374487 NRXN1Q9ULB1 1477 aa16.24■□□□□ 0.19
HMGCL-202ENST00000374487 LRPPRCP42704 1394 aaKnown RBP16.23■□□□□ 0.19
HMGCL-202ENST00000374487 SMG6Q86US8 1419 aaKnown RBP16.23■□□□□ 0.19
HMGCL-202ENST00000374487 SENP3-EIF4A1A0A087X0R7 540 aa16.23■□□□□ 0.19
HMGCL-202ENST00000374487 ASXL1Q8IXJ9 1541 aa16.22■□□□□ 0.19
HMGCL-202ENST00000374487 C14orf37Q86TY3 774 aa16.22■□□□□ 0.19
HMGCL-202ENST00000374487 NUDCQ9Y266 331 aa16.22■□□□□ 0.19
HMGCL-202ENST00000374487 ROBO2Q9HCK4 1378 aa16.22■□□□□ 0.19
HMGCL-202ENST00000374487 NKTRP30414 1462 aaKnown RBP16.22■□□□□ 0.19
HMGCL-202ENST00000374487 IQSEC2Q5JU85 1478 aa16.22■□□□□ 0.19
HMGCL-202ENST00000374487 PIK3R4Q99570 1358 aa16.21■□□□□ 0.19
HMGCL-202ENST00000374487 C14orf93Q9H972 538 aaKnown RBP16.21■□□□□ 0.19
HMGCL-202ENST00000374487 KNSTRNQ9Y448 316 aa16.21■□□□□ 0.19
HMGCL-202ENST00000374487 WAPLQ7Z5K2 1190 aa16.2■□□□□ 0.18
HMGCL-202ENST00000374487 XRN1Q8IZH2 1706 aaKnown RBP16.2■□□□□ 0.18
HMGCL-202ENST00000374487 SLC24A1O60721 1099 aa16.2■□□□□ 0.18
HMGCL-202ENST00000374487 PPP4R2Q9NY27 417 aa16.2■□□□□ 0.18
HMGCL-202ENST00000374487 TOM1O60784 492 aa16.19■□□□□ 0.18
HMGCL-202ENST00000374487 KIAA1210Q9ULL0 1709 aa16.18■□□□□ 0.18
HMGCL-202ENST00000374487 PLEKHH1Q9ULM0 1364 aa16.18■□□□□ 0.18
HMGCL-202ENST00000374487 SAFB2Q14151 953 aaKnown RBP eCLIP16.16■□□□□ 0.18
HMGCL-202ENST00000374487 MSH6P52701 1360 aa16.16■□□□□ 0.18
HMGCL-202ENST00000374487 HSPA1LP34931 641 aa16.14■□□□□ 0.17
HMGCL-202ENST00000374487 YTHDC2Q9H6S0 1430 aaKnown RBP16.14■□□□□ 0.17
HMGCL-202ENST00000374487 C19orf44Q9H6X5 657 aa16.14■□□□□ 0.17
HMGCL-202ENST00000374487 TRAK1Q9UPV9 953 aa16.14■□□□□ 0.17
HMGCL-202ENST00000374487 SALL2Q9Y467 1007 aaPredicted RBP16.14■□□□□ 0.17
HMGCL-202ENST00000374487 SLAIN2Q9P270 581 aa16.13■□□□□ 0.17
HMGCL-202ENST00000374487 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.12■□□□□ 0.17
HMGCL-202ENST00000374487 ADGRB1O14514 1584 aa16.12■□□□□ 0.17
HMGCL-202ENST00000374487 NUTM2FA1L443 756 aa16.11■□□□□ 0.17
HMGCL-202ENST00000374487 AMER1Q5JTC6 1135 aaPredicted RBP16.11■□□□□ 0.17
HMGCL-202ENST00000374487 ATF3P18847 181 aa16.1■□□□□ 0.17
HMGCL-202ENST00000374487 PRAM1Q96QH2 718 aa16.1■□□□□ 0.17
HMGCL-202ENST00000374487 PTCH1Q13635 1447 aa16.1■□□□□ 0.17
HMGCL-202ENST00000374487 NALCNQ8IZF0 1738 aa16.1■□□□□ 0.17
HMGCL-202ENST00000374487 ABCC11Q96J66 1382 aa16.1■□□□□ 0.17
HMGCL-202ENST00000374487 PDE3BQ13370 1112 aa16.09■□□□□ 0.17
HMGCL-202ENST00000374487 PPP2R1AP30153 589 aa16.09■□□□□ 0.17
HMGCL-202ENST00000374487 B4GALNT3Q6L9W6 998 aa16.09■□□□□ 0.17
HMGCL-202ENST00000374487 RNF123Q5XPI4 1314 aa16.08■□□□□ 0.17
HMGCL-202ENST00000374487 ADGRL3Q9HAR2 1447 aa16.08■□□□□ 0.16
HMGCL-202ENST00000374487 DDX17Q92841 729 aaKnown RBP16.08■□□□□ 0.16
HMGCL-202ENST00000374487 CENPJQ9HC77 1338 aaPredicted RBP16.08■□□□□ 0.16
HMGCL-202ENST00000374487 TECPR2O15040 1411 aa16.08■□□□□ 0.16
HMGCL-202ENST00000374487 NCOA3Q9Y6Q9 1424 aa16.08■□□□□ 0.16
HMGCL-202ENST00000374487 INSRP06213 1382 aa16.07■□□□□ 0.16
HMGCL-202ENST00000374487 WDR43Q15061 677 aaKnown RBP eCLIP16.07■□□□□ 0.16
HMGCL-202ENST00000374487 CADPS2Q86UW7 1296 aa16.07■□□□□ 0.16
HMGCL-202ENST00000374487 ROBO1Q9Y6N7 1651 aa16.05■□□□□ 0.16
HMGCL-202ENST00000374487 ORAI2Q96SN7 254 aa16.05■□□□□ 0.16
HMGCL-202ENST00000374487 RBM19Q9Y4C8 960 aaKnown RBP16.05■□□□□ 0.16
HMGCL-202ENST00000374487 NPC1L1Q9UHC9 1359 aa16.05■□□□□ 0.16
HMGCL-202ENST00000374487 MST1RQ04912 1400 aa16.04■□□□□ 0.16
HMGCL-202ENST00000374487 BRINP3Q76B58 766 aa16.04■□□□□ 0.16
HMGCL-202ENST00000374487 POGKQ9P215 609 aa16.04■□□□□ 0.16
HMGCL-202ENST00000374487 ADAMTS8Q9UP79 889 aa16.04■□□□□ 0.16
HMGCL-202ENST00000374487 SBNO2Q9Y2G9 1366 aa16.04■□□□□ 0.16
HMGCL-202ENST00000374487 BLMP54132 1417 aaPredicted RBP16.04■□□□□ 0.16
HMGCL-202ENST00000374487 MINK1Q8N4C8 1332 aaPredicted RBP16.04■□□□□ 0.16
HMGCL-202ENST00000374487 FAM135BQ49AJ0 1406 aa16.03■□□□□ 0.16
HMGCL-202ENST00000374487 RCAN3Q9UKA8 241 aa16.03■□□□□ 0.16
HMGCL-202ENST00000374487 KNDC1Q76NI1 1749 aa16.02■□□□□ 0.16
HMGCL-202ENST00000374487 MYOM1P52179 1685 aa16.01■□□□□ 0.15
HMGCL-202ENST00000374487 CDCA7LQ96GN5 454 aa16■□□□□ 0.15
HMGCL-202ENST00000374487 CCDC136Q96JN2 1154 aa16■□□□□ 0.15
HMGCL-202ENST00000374487 CARD14Q9BXL6 1004 aa16■□□□□ 0.15
HMGCL-202ENST00000374487 C1orf167Q5SNV9 1468 aa16■□□□□ 0.15
HMGCL-202ENST00000374487 SIRT1Q96EB6 747 aa16■□□□□ 0.15
HMGCL-202ENST00000374487 DCCP43146 1447 aa16■□□□□ 0.15
HMGCL-202ENST00000374487 RRP1P56182 461 aaKnown RBP15.99■□□□□ 0.15
HMGCL-202ENST00000374487 ESCO1Q5FWF5 840 aa15.98■□□□□ 0.15
HMGCL-202ENST00000374487 DLC1Q96QB1 1528 aa15.98■□□□□ 0.15
HMGCL-202ENST00000374487 XPCQ01831 940 aaPredicted RBP15.97■□□□□ 0.15
HMGCL-202ENST00000374487 ARHGEF28Q8N1W1 1705 aaKnown RBP15.97■□□□□ 0.15
HMGCL-202ENST00000374487 SLC12A5Q9H2X9 1139 aa15.96■□□□□ 0.14
HMGCL-202ENST00000374487 CDC42BPGQ6DT37 1551 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms