RNA–Protein interactions for RNA: ENST00000362839.1

RNU4-23P-201, Transcript of RNA, U4 small nuclear 23, pseudogene, humanhuman

BASIC

Gene RNU4-23P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-23P-201ENST00000362839 PLSCR2Q9NRY7 297 aa11.43□□□□□ -0.58
RNU4-23P-201ENST00000362839 ATP6V1AP38606 617 aa11.42□□□□□ -0.58
RNU4-23P-201ENST00000362839 GJD4Q96KN9 370 aaPredicted RBP11.42□□□□□ -0.58
RNU4-23P-201ENST00000362839 CFAP99D6REC4 459 aa11.4□□□□□ -0.58
RNU4-23P-201ENST00000362839 C6orf229H3BNL8 230 aa11.4□□□□□ -0.58
RNU4-23P-201ENST00000362839 MRPL50Q8N5N7 158 aaKnown RBP11.4□□□□□ -0.58
RNU4-23P-201ENST00000362839 FAM163AQ96GL9 167 aaPredicted RBP11.4□□□□□ -0.58
RNU4-23P-201ENST00000362839 HMX1Q9NP08 348 aaPredicted RBP11.4□□□□□ -0.58
RNU4-23P-201ENST00000362839 SERPINA10Q9UK55 444 aa11.4□□□□□ -0.58
RNU4-23P-201ENST00000362839 WWC1Q8IX03 1113 aa11.39□□□□□ -0.59
RNU4-23P-201ENST00000362839 CCDC97Q96F63 343 aaPredicted RBP11.39□□□□□ -0.59
RNU4-23P-201ENST00000362839 KMT5BQ4FZB7 885 aa11.38□□□□□ -0.59
RNU4-23P-201ENST00000362839 ADGRD1Q6QNK2 874 aa11.38□□□□□ -0.59
RNU4-23P-201ENST00000362839 HELBQ8NG08 1087 aaPredicted RBP11.38□□□□□ -0.59
RNU4-23P-201ENST00000362839 TSC1Q92574 1164 aa11.38□□□□□ -0.59
RNU4-23P-201ENST00000362839 SYMPKQ92797 1274 aaKnown RBP11.38□□□□□ -0.59
RNU4-23P-201ENST00000362839 NDUFB9Q9Y6M9 179 aa11.38□□□□□ -0.59
RNU4-23P-201ENST00000362839 LSM11P83369 360 aaKnown RBP eCLIP11.37□□□□□ -0.59
RNU4-23P-201ENST00000362839 LRRN4Q8WUT4 740 aa11.37□□□□□ -0.59
RNU4-23P-201ENST00000362839 TRIM34Q9BYJ4 488 aa11.37□□□□□ -0.59
RNU4-23P-201ENST00000362839 MORN1Q5T089 497 aa11.36□□□□□ -0.59
RNU4-23P-201ENST00000362839 LRCH3Q96II8 777 aa11.36□□□□□ -0.59
RNU4-23P-201ENST00000362839 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.36□□□□□ -0.59
RNU4-23P-201ENST00000362839 POM121CA8CG34 1229 aa11.35□□□□□ -0.59
RNU4-23P-201ENST00000362839 HRO43593 1189 aa11.35□□□□□ -0.59
RNU4-23P-201ENST00000362839 ACTN4O43707 911 aaKnown RBP11.35□□□□□ -0.59
RNU4-23P-201ENST00000362839 IRF5Q13568 498 aa11.34□□□□□ -0.59
RNU4-23P-201ENST00000362839 PUS10Q3MIT2 529 aaKnown RBP11.34□□□□□ -0.59
RNU4-23P-201ENST00000362839 PRR7Q8TB68 274 aa11.34□□□□□ -0.59
RNU4-23P-201ENST00000362839 NECTIN2Q92692 538 aa11.34□□□□□ -0.59
RNU4-23P-201ENST00000362839 GPR37L1O60883 481 aa11.33□□□□□ -0.6
RNU4-23P-201ENST00000362839 SLC27A5Q9Y2P5 690 aa11.33□□□□□ -0.6
RNU4-23P-201ENST00000362839 LCE2DQ5TA82 110 aaPredicted RBP11.31□□□□□ -0.6
RNU4-23P-201ENST00000362839 RETREG3Q86VR2 466 aa11.31□□□□□ -0.6
RNU4-23P-201ENST00000362839 EPS8L1Q8TE68 723 aa11.31□□□□□ -0.6
RNU4-23P-201ENST00000362839 CALR3Q96L12 384 aaKnown RBP11.31□□□□□ -0.6
RNU4-23P-201ENST00000362839 Q3C1V9 767 aa11.3□□□□□ -0.6
RNU4-23P-201ENST00000362839 GLMNQ92990 594 aa11.3□□□□□ -0.6
RNU4-23P-201ENST00000362839 PER1O15534 1290 aaPredicted RBP11.29□□□□□ -0.6
RNU4-23P-201ENST00000362839 ANKK1Q8NFD2 765 aa11.29□□□□□ -0.6
RNU4-23P-201ENST00000362839 PRR14Q9BWN1 585 aa11.29□□□□□ -0.6
RNU4-23P-201ENST00000362839 SOWAHBA6NEL2 793 aa11.28□□□□□ -0.6
RNU4-23P-201ENST00000362839 GOLGA8CPA6NN73 597 aa11.27□□□□□ -0.61
RNU4-23P-201ENST00000362839 WASHC4Q2M389 1173 aa11.27□□□□□ -0.61
RNU4-23P-201ENST00000362839 DESI1Q6ICB0 168 aa11.27□□□□□ -0.61
RNU4-23P-201ENST00000362839 ANKRD13DQ6ZTN6 518 aa11.27□□□□□ -0.61
RNU4-23P-201ENST00000362839 STAC3Q96MF2 364 aa11.27□□□□□ -0.61
RNU4-23P-201ENST00000362839 APLP1P51693 650 aa11.26□□□□□ -0.61
RNU4-23P-201ENST00000362839 PPP4CP60510 307 aa11.26□□□□□ -0.61
RNU4-23P-201ENST00000362839 NR6A1Q15406 480 aa11.26□□□□□ -0.61
RNU4-23P-201ENST00000362839 ADAMTS19Q8TE59 1207 aa11.26□□□□□ -0.61
RNU4-23P-201ENST00000362839 HPS5Q9UPZ3 1129 aa11.26□□□□□ -0.61
RNU4-23P-201ENST00000362839 BCAMP50895 628 aa11.25□□□□□ -0.61
RNU4-23P-201ENST00000362839 HDGFL1Q5TGJ6 251 aa11.25□□□□□ -0.61
RNU4-23P-201ENST00000362839 BLOC1S3Q6QNY0 202 aa11.25□□□□□ -0.61
RNU4-23P-201ENST00000362839 RNF19BQ6ZMZ0 732 aa11.25□□□□□ -0.61
RNU4-23P-201ENST00000362839 VAC14Q08AM6 782 aa11.24□□□□□ -0.61
RNU4-23P-201ENST00000362839 TRIM26Q12899 539 aaPredicted RBP11.24□□□□□ -0.61
RNU4-23P-201ENST00000362839 BRICD5Q6PL45 260 aa11.24□□□□□ -0.61
RNU4-23P-201ENST00000362839 TSR3Q9UJK0 312 aaKnown RBP11.24□□□□□ -0.61
RNU4-23P-201ENST00000362839 SALL2Q9Y467 1007 aaPredicted RBP11.24□□□□□ -0.61
RNU4-23P-201ENST00000362839 PDIA4P13667 645 aaKnown RBP11.23□□□□□ -0.61
RNU4-23P-201ENST00000362839 LYPD8Q6UX82 237 aa11.23□□□□□ -0.61
RNU4-23P-201ENST00000362839 SCUBE3Q8IX30 993 aa11.22□□□□□ -0.61
RNU4-23P-201ENST00000362839 USB1Q9BQ65 265 aaKnown RBP11.22□□□□□ -0.61
RNU4-23P-201ENST00000362839 WNT2BQ93097 391 aa11.21□□□□□ -0.61
RNU4-23P-201ENST00000362839 THAP11Q96EK4 314 aa11.2□□□□□ -0.62
RNU4-23P-201ENST00000362839 PCDHB3Q9Y5E6 796 aa11.2□□□□□ -0.62
RNU4-23P-201ENST00000362839 ALG2Q9H553 416 aa11.19□□□□□ -0.62
RNU4-23P-201ENST00000362839 NR1I2O75469 434 aa11.18□□□□□ -0.62
RNU4-23P-201ENST00000362839 FMNL1O95466 1100 aaPredicted RBP11.18□□□□□ -0.62
RNU4-23P-201ENST00000362839 PODXL2Q9NZ53 605 aa11.18□□□□□ -0.62
RNU4-23P-201ENST00000362839 WBP1LQ9NX94 342 aa11.17□□□□□ -0.62
RNU4-23P-201ENST00000362839 PPP1R15AO75807 674 aaPredicted RBP11.16□□□□□ -0.62
RNU4-23P-201ENST00000362839 F12P00748 615 aaPredicted RBP11.14□□□□□ -0.63
RNU4-23P-201ENST00000362839 JUNDP17535 347 aa11.14□□□□□ -0.63
RNU4-23P-201ENST00000362839 CFAP70Q5T0N1 1121 aa11.14□□□□□ -0.63
RNU4-23P-201ENST00000362839 PNMA1Q8ND90 353 aa11.14□□□□□ -0.63
RNU4-23P-201ENST00000362839 SOX11P35716 441 aa11.13□□□□□ -0.63
RNU4-23P-201ENST00000362839 RETREG2Q8NC44 543 aa11.13□□□□□ -0.63
RNU4-23P-201ENST00000362839 TRAIPQ9BWF2 469 aa11.13□□□□□ -0.63
RNU4-23P-201ENST00000362839 PPP1R12CQ9BZL4 782 aa11.13□□□□□ -0.63
RNU4-23P-201ENST00000362839 PTPRNQ16849 979 aa11.12□□□□□ -0.63
RNU4-23P-201ENST00000362839 MAP10Q9P2G4 905 aa11.12□□□□□ -0.63
RNU4-23P-201ENST00000362839 FAM160A2Q8N612 972 aaPredicted RBP11.11□□□□□ -0.63
RNU4-23P-201ENST00000362839 KRTAP3-3Q9BYR6 98 aa11.11□□□□□ -0.63
RNU4-23P-201ENST00000362839 KRTAP3-2Q9BYR7 98 aa11.11□□□□□ -0.63
RNU4-23P-201ENST00000362839 FKBPLQ9UIM3 349 aa11.11□□□□□ -0.63
RNU4-23P-201ENST00000362839 ACIN1Q9UKV3 1341 aaKnown RBP11.1□□□□□ -0.63
RNU4-23P-201ENST00000362839 RFX1P22670 979 aa11.1□□□□□ -0.63
RNU4-23P-201ENST00000362839 SEMA3FQ13275 785 aa11.1□□□□□ -0.63
RNU4-23P-201ENST00000362839 MSS51Q4VC12 460 aa11.1□□□□□ -0.63
RNU4-23P-201ENST00000362839 THSD4Q6ZMP0 1018 aa11.1□□□□□ -0.63
RNU4-23P-201ENST00000362839 PBXIP1Q96AQ6 731 aa11.1□□□□□ -0.63
RNU4-23P-201ENST00000362839 UCN2Q96RP3 112 aa11.1□□□□□ -0.63
RNU4-23P-201ENST00000362839 PALM3A6NDB9 673 aaPredicted RBP11.09□□□□□ -0.63
RNU4-23P-201ENST00000362839 COPS2P61201 443 aa11.09□□□□□ -0.63
RNU4-23P-201ENST00000362839 EIF4G2P78344 907 aaKnown RBP eCLIP11.09□□□□□ -0.63
RNU4-23P-201ENST00000362839 SRPK2P78362 688 aaKnown RBP11.09□□□□□ -0.63
RNU4-23P-201ENST00000362839 NR1H3Q13133 447 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms