RNA–Protein interactions for RNA: ENST00000360831.9

NLE1-201, Transcript of notchless homolog 1, humanhuman

TSL 5 BASIC

Gene NLE1, Length 1,726 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-201ENST00000360831 ALKQ9UM73 1620 aa24.42■■□□□ 1.5
NLE1-201ENST00000360831 TMF1P82094 1093 aa24.41■■□□□ 1.5
NLE1-201ENST00000360831 NLRP13Q86W25 1043 aa24.41■■□□□ 1.5
NLE1-201ENST00000360831 METP08581 1390 aa24.4■■□□□ 1.5
NLE1-201ENST00000360831 C14orf93Q9H972 538 aaKnown RBP24.4■■□□□ 1.5
NLE1-201ENST00000360831 RBM19Q9Y4C8 960 aaKnown RBP24.4■■□□□ 1.5
NLE1-201ENST00000360831 CFAP70Q5T0N1 1121 aa24.39■■□□□ 1.5
NLE1-201ENST00000360831 PIK3R4Q99570 1358 aa24.39■■□□□ 1.49
NLE1-201ENST00000360831 KCNA6P17658 529 aa24.38■■□□□ 1.49
NLE1-201ENST00000360831 INSRP06213 1382 aa24.36■■□□□ 1.49
NLE1-201ENST00000360831 SETD1AO15047 1707 aaKnown RBP24.35■■□□□ 1.49
NLE1-201ENST00000360831 AMOTL2Q9Y2J4 779 aa24.34■■□□□ 1.49
NLE1-201ENST00000360831 PTPRUQ92729 1446 aa24.34■■□□□ 1.49
NLE1-201ENST00000360831 LTBP4Q8N2S1 1624 aa24.33■■□□□ 1.49
NLE1-201ENST00000360831 TMEM132EQ6IEE7 984 aa24.33■■□□□ 1.49
NLE1-201ENST00000360831 PANK3Q9H999 370 aa24.32■■□□□ 1.48
NLE1-201ENST00000360831 CHD2O14647 1828 aaKnown RBP24.32■■□□□ 1.48
NLE1-201ENST00000360831 STRCP1A6NGW2 1772 aa24.32■■□□□ 1.48
NLE1-201ENST00000360831 NWD1Q149M9 1564 aa24.3■■□□□ 1.48
NLE1-201ENST00000360831 CPS1P31327 1500 aa24.3■■□□□ 1.48
NLE1-201ENST00000360831 ASXL1Q8IXJ9 1541 aa24.29■■□□□ 1.48
NLE1-201ENST00000360831 KIAA1210Q9ULL0 1709 aa24.28■■□□□ 1.48
NLE1-201ENST00000360831 PROSER2Q86WR7 435 aaPredicted RBP24.27■■□□□ 1.48
NLE1-201ENST00000360831 STK26Q9P289 416 aa24.27■■□□□ 1.48
NLE1-201ENST00000360831 NKTRP30414 1462 aaKnown RBP24.27■■□□□ 1.48
NLE1-201ENST00000360831 CDCA8Q53HL2 280 aa24.25■■□□□ 1.47
NLE1-201ENST00000360831 YTHDC2Q9H6S0 1430 aaKnown RBP24.25■■□□□ 1.47
NLE1-201ENST00000360831 XRN1Q8IZH2 1706 aaKnown RBP24.25■■□□□ 1.47
NLE1-201ENST00000360831 ADGRB1O14514 1584 aa24.24■■□□□ 1.47
NLE1-201ENST00000360831 PDE3BQ13370 1112 aa24.24■■□□□ 1.47
NLE1-201ENST00000360831 LRRC7Q96NW7 1537 aa24.24■■□□□ 1.47
NLE1-201ENST00000360831 CERKQ8TCT0 537 aa24.24■■□□□ 1.47
NLE1-201ENST00000360831 B4GALNT3Q6L9W6 998 aa24.23■■□□□ 1.47
NLE1-201ENST00000360831 RBM33Q96EV2 1170 aaKnown RBP24.23■■□□□ 1.47
NLE1-201ENST00000360831 ABCC11Q96J66 1382 aa24.23■■□□□ 1.47
NLE1-201ENST00000360831 TMEM94Q12767 1356 aa24.21■■□□□ 1.47
NLE1-201ENST00000360831 CC2D1BQ5T0F9 858 aaKnown RBP24.21■■□□□ 1.47
NLE1-201ENST00000360831 BLMP54132 1417 aaPredicted RBP24.21■■□□□ 1.47
NLE1-201ENST00000360831 EIF3AQ14152 1382 aaKnown RBP24.2■■□□□ 1.46
NLE1-201ENST00000360831 ROBO2Q9HCK4 1378 aa24.2■■□□□ 1.46
NLE1-201ENST00000360831 PTCH1Q13635 1447 aa24.2■■□□□ 1.46
NLE1-201ENST00000360831 TRAK1Q9UPV9 953 aa24.19■■□□□ 1.46
NLE1-201ENST00000360831 TECPR2O15040 1411 aa24.19■■□□□ 1.46
NLE1-201ENST00000360831 SLC24A1O60721 1099 aa24.16■■□□□ 1.46
NLE1-201ENST00000360831 FANCIQ9NVI1 1328 aa24.15■■□□□ 1.46
NLE1-201ENST00000360831 KNDC1Q76NI1 1749 aa24.15■■□□□ 1.46
NLE1-201ENST00000360831 WAPLQ7Z5K2 1190 aa24.15■■□□□ 1.46
NLE1-201ENST00000360831 C14orf37Q86TY3 774 aa24.15■■□□□ 1.46
NLE1-201ENST00000360831 SIRT1Q96EB6 747 aa24.15■■□□□ 1.46
NLE1-201ENST00000360831 ANP32EQ9BTT0 268 aa24.15■■□□□ 1.46
NLE1-201ENST00000360831 NPC1L1Q9UHC9 1359 aa24.15■■□□□ 1.46
NLE1-201ENST00000360831 KNSTRNQ9Y448 316 aa24.14■■□□□ 1.45
NLE1-201ENST00000360831 NCOA3Q9Y6Q9 1424 aa24.14■■□□□ 1.45
NLE1-201ENST00000360831 SENP3-EIF4A1A0A087X0R7 540 aa24.13■■□□□ 1.45
NLE1-201ENST00000360831 IQSEC2Q5JU85 1478 aa24.13■■□□□ 1.45
NLE1-201ENST00000360831 FAM135BQ49AJ0 1406 aa24.13■■□□□ 1.45
NLE1-201ENST00000360831 AMER1Q5JTC6 1135 aaPredicted RBP24.13■■□□□ 1.45
NLE1-201ENST00000360831 PRAM1Q96QH2 718 aa24.13■■□□□ 1.45
NLE1-201ENST00000360831 XIRP1Q702N8 1843 aaKnown RBP24.12■■□□□ 1.45
NLE1-201ENST00000360831 DLC1Q96QB1 1528 aa24.12■■□□□ 1.45
NLE1-201ENST00000360831 PLEKHH1Q9ULM0 1364 aa24.11■■□□□ 1.45
NLE1-201ENST00000360831 POGKQ9P215 609 aa24.11■■□□□ 1.45
NLE1-201ENST00000360831 MSH6P52701 1360 aa24.1■■□□□ 1.45
NLE1-201ENST00000360831 PPP2R1AP30153 589 aa24.1■■□□□ 1.45
NLE1-201ENST00000360831 RRP1P56182 461 aaKnown RBP24.1■■□□□ 1.45
NLE1-201ENST00000360831 RCAN3Q9UKA8 241 aa24.1■■□□□ 1.45
NLE1-201ENST00000360831 SAFB2Q14151 953 aaKnown RBP eCLIP24.09■■□□□ 1.45
NLE1-201ENST00000360831 C19orf44Q9H6X5 657 aa24.09■■□□□ 1.45
NLE1-201ENST00000360831 MYOM1P52179 1685 aa24.08■■□□□ 1.45
NLE1-201ENST00000360831 CCDC136Q96JN2 1154 aa24.07■■□□□ 1.44
NLE1-201ENST00000360831 ADGRL3Q9HAR2 1447 aa24.06■■□□□ 1.44
NLE1-201ENST00000360831 ARHGEF28Q8N1W1 1705 aaKnown RBP24.05■■□□□ 1.44
NLE1-201ENST00000360831 SBNO2Q9Y2G9 1366 aa24.04■■□□□ 1.44
NLE1-201ENST00000360831 ATF3P18847 181 aa24.03■■□□□ 1.44
NLE1-201ENST00000360831 UBAP1LF5GYI3 381 aa24.02■■□□□ 1.44
NLE1-201ENST00000360831 TOM1O60784 492 aa24.02■■□□□ 1.44
NLE1-201ENST00000360831 NALCNQ8IZF0 1738 aa24.02■■□□□ 1.44
NLE1-201ENST00000360831 CENPJQ9HC77 1338 aaPredicted RBP24.02■■□□□ 1.44
NLE1-201ENST00000360831 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.02■■□□□ 1.44
NLE1-201ENST00000360831 CADPS2Q86UW7 1296 aa24.01■■□□□ 1.43
NLE1-201ENST00000360831 SALL2Q9Y467 1007 aaPredicted RBP24.01■■□□□ 1.43
NLE1-201ENST00000360831 ADAMTS8Q9UP79 889 aa24.01■■□□□ 1.43
NLE1-201ENST00000360831 DCCP43146 1447 aa24■■□□□ 1.43
NLE1-201ENST00000360831 CDCA7LQ96GN5 454 aa24■■□□□ 1.43
NLE1-201ENST00000360831 MINK1Q8N4C8 1332 aaPredicted RBP24■■□□□ 1.43
NLE1-201ENST00000360831 MSH5O43196 834 aa23.98■■□□□ 1.43
NLE1-201ENST00000360831 WDR43Q15061 677 aaKnown RBP eCLIP23.97■■□□□ 1.43
NLE1-201ENST00000360831 SLAIN2Q9P270 581 aa23.96■■□□□ 1.43
NLE1-201ENST00000360831 EXOC6Q8TAG9 804 aa23.94■■□□□ 1.42
NLE1-201ENST00000360831 CDC42BPGQ6DT37 1551 aa23.94■■□□□ 1.42
NLE1-201ENST00000360831 PIP4K2BP78356 416 aa23.93■■□□□ 1.42
NLE1-201ENST00000360831 QRICH2Q9H0J4 1663 aa23.92■■□□□ 1.42
NLE1-201ENST00000360831 ADGRB2O60241 1585 aa23.92■■□□□ 1.42
NLE1-201ENST00000360831 WASLO00401 505 aaPredicted RBP23.91■■□□□ 1.42
NLE1-201ENST00000360831 FBXO41Q8TF61 875 aa23.91■■□□□ 1.42
NLE1-201ENST00000360831 MST1RQ04912 1400 aa23.91■■□□□ 1.42
NLE1-201ENST00000360831 ZNF521Q96K83 1311 aa23.9■■□□□ 1.42
NLE1-201ENST00000360831 NUTM2FA1L443 756 aa23.9■■□□□ 1.42
NLE1-201ENST00000360831 CARD14Q9BXL6 1004 aa23.9■■□□□ 1.42
NLE1-201ENST00000360831 CDK19Q9BWU1 502 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms