RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 KIF3BO15066 747 aa7□□□□□ -1.29
BRCA1-203ENST00000357654 ST18O60284 1047 aa7□□□□□ -1.29
BRCA1-203ENST00000357654 TRAK1Q9UPV9 953 aa7□□□□□ -1.29
BRCA1-203ENST00000357654 TRIM21P19474 475 aaKnown RBP7□□□□□ -1.29
BRCA1-203ENST00000357654 NOP2P46087 812 aaKnown RBP7□□□□□ -1.29
BRCA1-203ENST00000357654 CCDC191Q8NCU4 936 aa7□□□□□ -1.29
BRCA1-203ENST00000357654 PHF14O94880 888 aa7□□□□□ -1.29
BRCA1-203ENST00000357654 DDX54Q8TDD1 881 aaKnown RBP7□□□□□ -1.29
BRCA1-203ENST00000357654 G3BP1Q13283 466 aaKnown RBP eCLIP7□□□□□ -1.29
BRCA1-203ENST00000357654 ANKRD18AQ8IVF6 992 aa7□□□□□ -1.29
BRCA1-203ENST00000357654 USP5P45974 858 aa7□□□□□ -1.29
BRCA1-203ENST00000357654 ANAPC15P60006 121 aa7□□□□□ -1.29
BRCA1-203ENST00000357654 ANKRD45Q5TZF3 282 aa7□□□□□ -1.29
BRCA1-203ENST00000357654 RAPGEF4Q8WZA2 1011 aa7□□□□□ -1.29
BRCA1-203ENST00000357654 COG3Q96JB2 828 aa7□□□□□ -1.29
BRCA1-203ENST00000357654 DNAJC2Q99543 621 aaKnown RBP7□□□□□ -1.29
BRCA1-203ENST00000357654 SSBP05455 408 aaKnown RBP eCLIP6.99□□□□□ -1.29
BRCA1-203ENST00000357654 BCL2L13Q9BXK5 485 aa6.99□□□□□ -1.29
BRCA1-203ENST00000357654 ATXN8OSP0DMR3 200 aa6.99□□□□□ -1.29
BRCA1-203ENST00000357654 DESP17661 470 aa6.99□□□□□ -1.29
BRCA1-203ENST00000357654 PDE3BQ13370 1112 aa6.99□□□□□ -1.29
BRCA1-203ENST00000357654 RALYLQ86SE5 291 aaKnown RBP6.99□□□□□ -1.29
BRCA1-203ENST00000357654 RGS22Q8NE09 1264 aa6.99□□□□□ -1.29
BRCA1-203ENST00000357654 PABPN1LA6NDY0 278 aaKnown RBP6.99□□□□□ -1.29
BRCA1-203ENST00000357654 CCDC181Q5TID7 509 aa6.99□□□□□ -1.29
BRCA1-203ENST00000357654 SIN3AQ96ST3 1273 aa6.99□□□□□ -1.29
BRCA1-203ENST00000357654 DDX23Q9BUQ8 820 aaKnown RBP6.99□□□□□ -1.29
BRCA1-203ENST00000357654 RSF1Q96T23 1441 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-203ENST00000357654 CCNB3Q8WWL7 1395 aa6.98□□□□□ -1.29
BRCA1-203ENST00000357654 VPS37CA5D8V6 355 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-203ENST00000357654 CNNM1Q9NRU3 951 aa6.98□□□□□ -1.29
BRCA1-203ENST00000357654 MAGEC2Q9UBF1 373 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-203ENST00000357654 HSP90AB3PQ58FF7 597 aa6.98□□□□□ -1.29
BRCA1-203ENST00000357654 DDX58O95786 925 aaKnown RBP6.98□□□□□ -1.29
BRCA1-203ENST00000357654 MYO6Q9UM54 1294 aa6.97□□□□□ -1.29
BRCA1-203ENST00000357654 GOLGA6L3A6NEY3 463 aa6.97□□□□□ -1.29
BRCA1-203ENST00000357654 SLC3A2P08195 630 aaKnown RBP6.97□□□□□ -1.29
BRCA1-203ENST00000357654 CENPHQ9H3R5 247 aa6.97□□□□□ -1.29
BRCA1-203ENST00000357654 NF2P35240 595 aa6.97□□□□□ -1.29
BRCA1-203ENST00000357654 XBP1P17861 261 aa6.97□□□□□ -1.29
BRCA1-203ENST00000357654 GBP2P32456 591 aaPredicted RBP6.97□□□□□ -1.29
BRCA1-203ENST00000357654 MINK1Q8N4C8 1332 aaPredicted RBP6.97□□□□□ -1.29
BRCA1-203ENST00000357654 H0YHG0 523 aa6.96□□□□□ -1.29
BRCA1-203ENST00000357654 ARL1P40616 181 aaPredicted RBP6.96□□□□□ -1.29
BRCA1-203ENST00000357654 DCTN1Q14203 1278 aa6.96□□□□□ -1.29
BRCA1-203ENST00000357654 CCDC112Q8NEF3 446 aa6.96□□□□□ -1.29
BRCA1-203ENST00000357654 SERPINA10Q9UK55 444 aa6.96□□□□□ -1.29
BRCA1-203ENST00000357654 EZRP15311 586 aaKnown RBP6.96□□□□□ -1.3
BRCA1-203ENST00000357654 OLFM4Q6UX06 510 aa6.96□□□□□ -1.3
BRCA1-203ENST00000357654 ERC1Q8IUD2 1116 aa6.96□□□□□ -1.3
BRCA1-203ENST00000357654 ROCK2O75116 1388 aaKnown RBP6.96□□□□□ -1.3
BRCA1-203ENST00000357654 BIRC2Q13490 618 aa6.96□□□□□ -1.3
BRCA1-203ENST00000357654 CLASRPQ8N2M8 674 aaKnown RBP6.96□□□□□ -1.3
BRCA1-203ENST00000357654 TTC39AQ5SRH9 613 aa6.96□□□□□ -1.3
BRCA1-203ENST00000357654 LRSAM1Q6UWE0 723 aa6.96□□□□□ -1.3
BRCA1-203ENST00000357654 ZNF710Q8N1W2 664 aa6.96□□□□□ -1.3
BRCA1-203ENST00000357654 PMFBP1Q8TBY8 1022 aa6.95□□□□□ -1.3
BRCA1-203ENST00000357654 TBC1D2BQ9UPU7 963 aa6.95□□□□□ -1.3
BRCA1-203ENST00000357654 ZKSCAN1P17029 563 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-203ENST00000357654 TMOD2Q9NZR1 351 aa6.95□□□□□ -1.3
BRCA1-203ENST00000357654 ESCO1Q5FWF5 840 aa6.95□□□□□ -1.3
BRCA1-203ENST00000357654 PPP4R3AQ6IN85 833 aa6.95□□□□□ -1.3
BRCA1-203ENST00000357654 SCRIBQ14160 1630 aa6.95□□□□□ -1.3
BRCA1-203ENST00000357654 FKBP5Q13451 457 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-203ENST00000357654 NUP133Q8WUM0 1156 aa6.95□□□□□ -1.3
BRCA1-203ENST00000357654 HSP90AA2PQ14568 343 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-203ENST00000357654 TSPYL1Q9H0U9 437 aa6.95□□□□□ -1.3
BRCA1-203ENST00000357654 KTN1Q86UP2 1357 aaKnown RBP6.94□□□□□ -1.3
BRCA1-203ENST00000357654 SSX2IPQ9Y2D8 614 aa6.94□□□□□ -1.3
BRCA1-203ENST00000357654 IL27Q8NEV9 243 aa6.94□□□□□ -1.3
BRCA1-203ENST00000357654 RUFY2Q8WXA3 655 aa6.94□□□□□ -1.3
BRCA1-203ENST00000357654 CEBPZQ03701 1054 aaKnown RBP6.94□□□□□ -1.3
BRCA1-203ENST00000357654 SASS6Q6UVJ0 657 aa6.94□□□□□ -1.3
BRCA1-203ENST00000357654 MNS1Q8NEH6 495 aa6.94□□□□□ -1.3
BRCA1-203ENST00000357654 CHMP5Q9NZZ3 219 aa6.94□□□□□ -1.3
BRCA1-203ENST00000357654 SOGA3Q5TF21 947 aa6.93□□□□□ -1.3
BRCA1-203ENST00000357654 TOM1L2Q6ZVM7 507 aa6.93□□□□□ -1.3
BRCA1-203ENST00000357654 TEX35Q5T0J7 233 aa6.93□□□□□ -1.3
BRCA1-203ENST00000357654 DEF6Q9H4E7 631 aa6.93□□□□□ -1.3
BRCA1-203ENST00000357654 ADAMTS2O95450 1211 aa6.93□□□□□ -1.3
BRCA1-203ENST00000357654 BEGAINQ9BUH8 593 aa6.93□□□□□ -1.3
BRCA1-203ENST00000357654 RSPH6AQ9H0K4 717 aa6.93□□□□□ -1.3
BRCA1-203ENST00000357654 SH3BP5O60239 455 aa6.93□□□□□ -1.3
BRCA1-203ENST00000357654 FAM193AP78312 1265 aa6.93□□□□□ -1.3
BRCA1-203ENST00000357654 CRACR2BQ8N4Y2 399 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-203ENST00000357654 FMNL2Q96PY5 1086 aa6.93□□□□□ -1.3
BRCA1-203ENST00000357654 FAM161AQ3B820 660 aa6.92□□□□□ -1.3
BRCA1-203ENST00000357654 AXDND1Q5T1B0 1012 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-203ENST00000357654 TAF3Q5VWG9 929 aa6.92□□□□□ -1.3
BRCA1-203ENST00000357654 CEP63Q96MT8 703 aa6.92□□□□□ -1.3
BRCA1-203ENST00000357654 CCDC85AQ96PX6 553 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-203ENST00000357654 DNAI2Q9GZS0 605 aa6.92□□□□□ -1.3
BRCA1-203ENST00000357654 GNL3LQ9NVN8 582 aaKnown RBP6.92□□□□□ -1.3
BRCA1-203ENST00000357654 ERLIN2O94905 339 aa6.92□□□□□ -1.3
BRCA1-203ENST00000357654 SMC1AQ14683 1233 aaKnown RBP6.92□□□□□ -1.3
BRCA1-203ENST00000357654 TXLNAP40222 546 aa6.92□□□□□ -1.3
BRCA1-203ENST00000357654 PKD2Q13563 968 aa6.92□□□□□ -1.3
BRCA1-203ENST00000357654 SMC2O95347 1197 aa6.92□□□□□ -1.3
BRCA1-203ENST00000357654 TNNT1P13805 278 aa6.92□□□□□ -1.3
BRCA1-203ENST00000357654 IFT57Q9NWB7 429 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms