RNA–Protein interactions for RNA: ENST00000356073.8

TCF4-202, Transcript of transcription factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF4, Length 8,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-202ENST00000356073 TTC16Q8NEE8 873 aa13.61□□□□□ -0.23
TCF4-202ENST00000356073 COMMD10Q9Y6G5 202 aa13.61□□□□□ -0.23
TCF4-202ENST00000356073 ZSCAN29Q8IWY8 852 aaPredicted RBP13.6□□□□□ -0.23
TCF4-202ENST00000356073 KDM4AO75164 1064 aa13.6□□□□□ -0.23
TCF4-202ENST00000356073 LEKR1Q6ZMV7 388 aa13.6□□□□□ -0.23
TCF4-202ENST00000356073 H0YHG0 523 aa13.59□□□□□ -0.23
TCF4-202ENST00000356073 MICAL3Q7RTP6 2002 aa13.59□□□□□ -0.23
TCF4-202ENST00000356073 ENOX2Q16206 610 aaKnown RBP13.59□□□□□ -0.23
TCF4-202ENST00000356073 NECTIN2Q92692 538 aa13.59□□□□□ -0.23
TCF4-202ENST00000356073 ZHX3Q9H4I2 956 aa13.59□□□□□ -0.23
TCF4-202ENST00000356073 DNAI2Q9GZS0 605 aa13.58□□□□□ -0.23
TCF4-202ENST00000356073 BBXQ8WY36 941 aaPredicted RBP13.58□□□□□ -0.24
TCF4-202ENST00000356073 XBP1P17861 261 aa13.58□□□□□ -0.24
TCF4-202ENST00000356073 MNS1Q8NEH6 495 aa13.58□□□□□ -0.24
TCF4-202ENST00000356073 AXDND1Q5T1B0 1012 aaPredicted RBP13.57□□□□□ -0.24
TCF4-202ENST00000356073 PMFBP1Q8TBY8 1022 aa13.57□□□□□ -0.24
TCF4-202ENST00000356073 UQCRHLA0A096LP55 91 aa13.57□□□□□ -0.24
TCF4-202ENST00000356073 WASHC4Q2M389 1173 aa13.57□□□□□ -0.24
TCF4-202ENST00000356073 DDX58O95786 925 aaKnown RBP13.57□□□□□ -0.24
TCF4-202ENST00000356073 IFIT2P09913 472 aaKnown RBP13.57□□□□□ -0.24
TCF4-202ENST00000356073 TTLL5Q6EMB2 1281 aa13.57□□□□□ -0.24
TCF4-202ENST00000356073 RALYLQ86SE5 291 aaKnown RBP13.56□□□□□ -0.24
TCF4-202ENST00000356073 BAZ2BQ9UIF8 2168 aaKnown RBP13.56□□□□□ -0.24
TCF4-202ENST00000356073 NEUROD6Q96NK8 337 aa13.56□□□□□ -0.24
TCF4-202ENST00000356073 PABPN1LA6NDY0 278 aaKnown RBP13.56□□□□□ -0.24
TCF4-202ENST00000356073 CCP110O43303 1012 aa13.56□□□□□ -0.24
TCF4-202ENST00000356073 TIMELESSQ9UNS1 1208 aa13.56□□□□□ -0.24
TCF4-202ENST00000356073 SLC3A2P08195 630 aaKnown RBP13.55□□□□□ -0.24
TCF4-202ENST00000356073 UQCRHP07919 91 aa13.55□□□□□ -0.24
TCF4-202ENST00000356073 SART3Q15020 963 aaKnown RBP13.55□□□□□ -0.24
TCF4-202ENST00000356073 VTI1AQ96AJ9 217 aa13.55□□□□□ -0.24
TCF4-202ENST00000356073 FAM107BQ9H098 131 aa13.54□□□□□ -0.24
TCF4-202ENST00000356073 ANAPC15P60006 121 aa13.54□□□□□ -0.24
TCF4-202ENST00000356073 ANO2Q9NQ90 1003 aa13.54□□□□□ -0.24
TCF4-202ENST00000356073 ZKSCAN1P17029 563 aaPredicted RBP13.54□□□□□ -0.24
TCF4-202ENST00000356073 CCDC181Q5TID7 509 aa13.54□□□□□ -0.24
TCF4-202ENST00000356073 RAPGEF4Q8WZA2 1011 aa13.54□□□□□ -0.24
TCF4-202ENST00000356073 BICD2Q8TD16 824 aa13.53□□□□□ -0.24
TCF4-202ENST00000356073 CHMP5Q9NZZ3 219 aa13.53□□□□□ -0.24
TCF4-202ENST00000356073 RUFY2Q8WXA3 655 aa13.53□□□□□ -0.24
TCF4-202ENST00000356073 CLUAP1Q96AJ1 413 aa13.53□□□□□ -0.24
TCF4-202ENST00000356073 MYH6P13533 1939 aa13.53□□□□□ -0.24
TCF4-202ENST00000356073 G3BP1Q13283 466 aaKnown RBP eCLIP13.53□□□□□ -0.24
TCF4-202ENST00000356073 WASHC2CQ9Y4E1 1318 aa13.53□□□□□ -0.24
TCF4-202ENST00000356073 BRD2P25440 801 aaKnown RBP13.52□□□□□ -0.24
TCF4-202ENST00000356073 PDCL2Q8N4E4 241 aa13.52□□□□□ -0.24
TCF4-202ENST00000356073 DDX23Q9BUQ8 820 aaKnown RBP13.52□□□□□ -0.24
TCF4-202ENST00000356073 ELL2O00472 640 aaPredicted RBP13.52□□□□□ -0.24
TCF4-202ENST00000356073 RBM42Q9BTD8 480 aaKnown RBP13.52□□□□□ -0.24
TCF4-202ENST00000356073 RGS22Q8NE09 1264 aa13.52□□□□□ -0.25
TCF4-202ENST00000356073 STRN4Q9NRL3 753 aa13.52□□□□□ -0.25
TCF4-202ENST00000356073 LRSAM1Q6UWE0 723 aa13.52□□□□□ -0.25
TCF4-202ENST00000356073 FAM13BQ9NYF5 915 aa13.52□□□□□ -0.25
TCF4-202ENST00000356073 BCCIPQ9P287 314 aaKnown RBP eCLIP13.51□□□□□ -0.25
TCF4-202ENST00000356073 MRPS9P82933 396 aaKnown RBP13.51□□□□□ -0.25
TCF4-202ENST00000356073 DDX11Q96FC9 970 aa13.51□□□□□ -0.25
TCF4-202ENST00000356073 GBP2P32456 591 aaPredicted RBP13.51□□□□□ -0.25
TCF4-202ENST00000356073 PDILTQ8N807 584 aa13.51□□□□□ -0.25
TCF4-202ENST00000356073 NLRP2Q9NX02 1062 aa13.51□□□□□ -0.25
TCF4-202ENST00000356073 CCDC112Q8NEF3 446 aa13.5□□□□□ -0.25
TCF4-202ENST00000356073 ERC1Q8IUD2 1116 aa13.5□□□□□ -0.25
TCF4-202ENST00000356073 ERLIN2O94905 339 aa13.5□□□□□ -0.25
TCF4-202ENST00000356073 KAT6AQ92794 2004 aa13.5□□□□□ -0.25
TCF4-202ENST00000356073 ATP2B1P20020 1258 aa13.5□□□□□ -0.25
TCF4-202ENST00000356073 AIMP1Q12904 312 aaKnown RBP13.5□□□□□ -0.25
TCF4-202ENST00000356073 COG3Q96JB2 828 aa13.49□□□□□ -0.25
TCF4-202ENST00000356073 TMOD2Q9NZR1 351 aa13.49□□□□□ -0.25
TCF4-202ENST00000356073 KIAA0754O94854 1291 aa13.49□□□□□ -0.25
TCF4-202ENST00000356073 MAGEC2Q9UBF1 373 aaPredicted RBP13.49□□□□□ -0.25
TCF4-202ENST00000356073 ZNF76P36508 570 aa13.49□□□□□ -0.25
TCF4-202ENST00000356073 RIC3Q7Z5B4 369 aa13.49□□□□□ -0.25
TCF4-202ENST00000356073 RNF20Q5VTR2 975 aa13.49□□□□□ -0.25
TCF4-202ENST00000356073 KIF6Q6ZMV9 814 aa13.49□□□□□ -0.25
TCF4-202ENST00000356073 CCNB3Q8WWL7 1395 aa13.48□□□□□ -0.25
TCF4-202ENST00000356073 DHX37Q8IY37 1157 aaKnown RBP13.48□□□□□ -0.25
TCF4-202ENST00000356073 PUS7Q96PZ0 661 aaKnown RBP13.48□□□□□ -0.25
TCF4-202ENST00000356073 NF2P35240 595 aa13.48□□□□□ -0.25
TCF4-202ENST00000356073 SSX2IPQ9Y2D8 614 aa13.48□□□□□ -0.25
TCF4-202ENST00000356073 TBC1D2BQ9UPU7 963 aa13.48□□□□□ -0.25
TCF4-202ENST00000356073 TXLNAP40222 546 aa13.47□□□□□ -0.25
TCF4-202ENST00000356073 PPP4R3AQ6IN85 833 aa13.47□□□□□ -0.25
TCF4-202ENST00000356073 OLFM4Q6UX06 510 aa13.47□□□□□ -0.25
TCF4-202ENST00000356073 TAX1BP1Q86VP1 789 aa13.47□□□□□ -0.25
TCF4-202ENST00000356073 PDE3BQ13370 1112 aa13.47□□□□□ -0.25
TCF4-202ENST00000356073 NINQ8N4C6 2090 aa13.47□□□□□ -0.25
TCF4-202ENST00000356073 NUMA1Q14980 2115 aa13.47□□□□□ -0.25
TCF4-202ENST00000356073 CCDC39Q9UFE4 941 aa13.47□□□□□ -0.25
TCF4-202ENST00000356073 KIF3BO15066 747 aa13.46□□□□□ -0.25
TCF4-202ENST00000356073 CLASRPQ8N2M8 674 aaKnown RBP13.46□□□□□ -0.25
TCF4-202ENST00000356073 NAT10Q9H0A0 1025 aaKnown RBP13.46□□□□□ -0.25
TCF4-202ENST00000356073 LETM1O95202 739 aaPredicted RBP13.46□□□□□ -0.26
TCF4-202ENST00000356073 BCL11BQ9C0K0 894 aaPredicted RBP13.46□□□□□ -0.26
TCF4-202ENST00000356073 BRPF1P55201 1214 aaPredicted RBP13.46□□□□□ -0.26
TCF4-202ENST00000356073 GOLGA6L10A6NI86 522 aa13.45□□□□□ -0.26
TCF4-202ENST00000356073 EIF3JO75822 258 aaKnown RBP13.45□□□□□ -0.26
TCF4-202ENST00000356073 GNL3LQ9NVN8 582 aaKnown RBP13.45□□□□□ -0.26
TCF4-202ENST00000356073 CLEC11AQ9Y240 323 aa13.45□□□□□ -0.26
TCF4-202ENST00000356073 SETD1BQ9UPS6 1966 aaKnown RBP13.45□□□□□ -0.26
TCF4-202ENST00000356073 BAZ1AQ9NRL2 1556 aaPredicted RBP13.44□□□□□ -0.26
TCF4-202ENST00000356073 STAMBPO95630 424 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms