RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 REREQ9P2R6 1566 aa9.56□□□□□ -0.88
CCR9-201ENST00000355983 ERBINQ96RT1 1412 aa9.55□□□□□ -0.88
CCR9-201ENST00000355983 FAM193AP78312 1265 aa9.55□□□□□ -0.88
CCR9-201ENST00000355983 FEZ1Q99689 392 aa9.55□□□□□ -0.88
CCR9-201ENST00000355983 SHANK2Q9UPX8 1470 aa9.55□□□□□ -0.88
CCR9-201ENST00000355983 RNF17Q9BXT8 1623 aaKnown RBP9.55□□□□□ -0.88
CCR9-201ENST00000355983 BCAR3O75815 825 aa9.55□□□□□ -0.88
CCR9-201ENST00000355983 NBPF1Q3BBV0 1214 aa9.55□□□□□ -0.88
CCR9-201ENST00000355983 CADPSQ9ULU8 1353 aa9.55□□□□□ -0.88
CCR9-201ENST00000355983 PPP2R1AP30153 589 aa9.54□□□□□ -0.88
CCR9-201ENST00000355983 GABPB1Q06547 395 aaPredicted RBP9.54□□□□□ -0.88
CCR9-201ENST00000355983 PKD2Q13563 968 aa9.54□□□□□ -0.88
CCR9-201ENST00000355983 ZNF710Q8N1W2 664 aa9.54□□□□□ -0.88
CCR9-201ENST00000355983 KANK1Q14678 1352 aa9.54□□□□□ -0.88
CCR9-201ENST00000355983 KIAA2012Q0VF49 1180 aa9.54□□□□□ -0.88
CCR9-201ENST00000355983 TESK2Q96S53 571 aa9.54□□□□□ -0.88
CCR9-201ENST00000355983 CHMP4BQ9H444 224 aaKnown RBP9.54□□□□□ -0.88
CCR9-201ENST00000355983 KIF16BQ96L93 1317 aa9.54□□□□□ -0.88
CCR9-201ENST00000355983 FTSJ3Q8IY81 847 aaKnown RBP9.53□□□□□ -0.88
CCR9-201ENST00000355983 SPRYD3Q8NCJ5 442 aa9.53□□□□□ -0.88
CCR9-201ENST00000355983 DDX49Q9Y6V7 483 aaKnown RBP9.53□□□□□ -0.88
CCR9-201ENST00000355983 ASXL1Q8IXJ9 1541 aa9.53□□□□□ -0.88
CCR9-201ENST00000355983 DNAJC5BQ9UF47 199 aa9.53□□□□□ -0.88
CCR9-201ENST00000355983 WDR7Q9Y4E6 1490 aa9.53□□□□□ -0.88
CCR9-201ENST00000355983 BAG4O95429 457 aaKnown RBP9.52□□□□□ -0.88
CCR9-201ENST00000355983 ZSCAN23Q3MJ62 389 aa9.52□□□□□ -0.88
CCR9-201ENST00000355983 PANK3Q9H999 370 aa9.52□□□□□ -0.88
CCR9-201ENST00000355983 PCDHB15Q9Y5E8 787 aa9.52□□□□□ -0.88
CCR9-201ENST00000355983 ADCY10Q96PN6 1610 aa9.52□□□□□ -0.89
CCR9-201ENST00000355983 HDAC1Q13547 482 aaPredicted RBP9.52□□□□□ -0.89
CCR9-201ENST00000355983 SYCP1Q15431 976 aa9.52□□□□□ -0.89
CCR9-201ENST00000355983 CCDC141Q6ZP82 1450 aa9.52□□□□□ -0.89
CCR9-201ENST00000355983 PBRM1Q86U86 1689 aa9.52□□□□□ -0.89
CCR9-201ENST00000355983 DISP3Q9P2K9 1392 aa9.52□□□□□ -0.89
CCR9-201ENST00000355983 K7ELQ4 463 aaPredicted RBP9.51□□□□□ -0.89
CCR9-201ENST00000355983 NUCB2P80303 420 aa9.51□□□□□ -0.89
CCR9-201ENST00000355983 CC2D1BQ5T0F9 858 aaKnown RBP9.51□□□□□ -0.89
CCR9-201ENST00000355983 AEBP2Q6ZN18 517 aaPredicted RBP9.51□□□□□ -0.89
CCR9-201ENST00000355983 CREBRFQ8IUR6 639 aa9.51□□□□□ -0.89
CCR9-201ENST00000355983 RBSNQ9H1K0 784 aa9.51□□□□□ -0.89
CCR9-201ENST00000355983 COG6Q9Y2V7 657 aa9.51□□□□□ -0.89
CCR9-201ENST00000355983 MFAP1P55081 439 aaKnown RBP9.51□□□□□ -0.89
CCR9-201ENST00000355983 LRSAM1Q6UWE0 723 aa9.51□□□□□ -0.89
CCR9-201ENST00000355983 PIBF1Q8WXW3 757 aa9.51□□□□□ -0.89
CCR9-201ENST00000355983 ANKRD7Q92527 254 aa9.51□□□□□ -0.89
CCR9-201ENST00000355983 SPTLC3Q9NUV7 552 aa9.51□□□□□ -0.89
CCR9-201ENST00000355983 CDK13Q14004 1512 aaKnown RBP9.5□□□□□ -0.89
CCR9-201ENST00000355983 TMF1P82094 1093 aa9.5□□□□□ -0.89
CCR9-201ENST00000355983 DNAJC2Q99543 621 aaKnown RBP9.5□□□□□ -0.89
CCR9-201ENST00000355983 TSPYL1Q9H0U9 437 aa9.5□□□□□ -0.89
CCR9-201ENST00000355983 KIF3AQ9Y496 699 aa9.5□□□□□ -0.89
CCR9-201ENST00000355983 LAMC3Q9Y6N6 1575 aa9.5□□□□□ -0.89
CCR9-201ENST00000355983 ANKRD50Q9ULJ7 1429 aa9.5□□□□□ -0.89
CCR9-201ENST00000355983 CYP2E1P05181 493 aaPredicted RBP9.5□□□□□ -0.89
CCR9-201ENST00000355983 CHRM1P11229 460 aaPredicted RBP9.5□□□□□ -0.89
CCR9-201ENST00000355983 ATP2B3Q16720 1220 aa9.5□□□□□ -0.89
CCR9-201ENST00000355983 MAGI2Q86UL8 1455 aa9.5□□□□□ -0.89
CCR9-201ENST00000355983 CCDC66A2RUB6 948 aa9.49□□□□□ -0.89
CCR9-201ENST00000355983 CBX1P83916 185 aa9.49□□□□□ -0.89
CCR9-201ENST00000355983 PDCL2Q8N4E4 241 aa9.49□□□□□ -0.89
CCR9-201ENST00000355983 PANK1Q8TE04 598 aa9.49□□□□□ -0.89
CCR9-201ENST00000355983 ZNF830Q96NB3 372 aaPredicted RBP9.49□□□□□ -0.89
CCR9-201ENST00000355983 SPINK5Q9NQ38 1064 aaPredicted RBP9.49□□□□□ -0.89
CCR9-201ENST00000355983 LMBRD1Q9NUN5 540 aa9.49□□□□□ -0.89
CCR9-201ENST00000355983 OGFRQ9NZT2 677 aa9.49□□□□□ -0.89
CCR9-201ENST00000355983 SCAF11Q99590 1463 aaKnown RBP9.49□□□□□ -0.89
CCR9-201ENST00000355983 TOPBP1Q92547 1522 aa9.49□□□□□ -0.89
CCR9-201ENST00000355983 CFAP74Q9C0B2 1584 aa9.49□□□□□ -0.89
CCR9-201ENST00000355983 RARSP54136 660 aaKnown RBP9.49□□□□□ -0.89
CCR9-201ENST00000355983 CDCA8Q53HL2 280 aa9.49□□□□□ -0.89
CCR9-201ENST00000355983 SYNJ2O15056 1496 aa9.48□□□□□ -0.89
CCR9-201ENST00000355983 CT47B1P0C2W7 299 aaPredicted RBP9.48□□□□□ -0.89
CCR9-201ENST00000355983 CDK11BP21127 795 aaKnown RBP9.48□□□□□ -0.89
CCR9-201ENST00000355983 IQGAP1P46940 1657 aa9.48□□□□□ -0.89
CCR9-201ENST00000355983 UVSSAQ2YD98 709 aa9.48□□□□□ -0.89
CCR9-201ENST00000355983 CTIFO43310 598 aaKnown RBP9.48□□□□□ -0.89
CCR9-201ENST00000355983 FKBP5Q13451 457 aaPredicted RBP9.48□□□□□ -0.89
CCR9-201ENST00000355983 TEX2Q8IWB9 1127 aa9.48□□□□□ -0.89
CCR9-201ENST00000355983 KIF2CQ99661 725 aa9.48□□□□□ -0.89
CCR9-201ENST00000355983 CWC22Q9HCG8 908 aaKnown RBP9.48□□□□□ -0.89
CCR9-201ENST00000355983 DIAPH3Q9NSV4 1193 aa9.48□□□□□ -0.89
CCR9-201ENST00000355983 MYO5CQ9NQX4 1742 aa9.47□□□□□ -0.89
CCR9-201ENST00000355983 SSFA2P28290 1259 aa9.47□□□□□ -0.89
CCR9-201ENST00000355983 CFAP44Q96MT7 982 aa9.47□□□□□ -0.89
CCR9-201ENST00000355983 CLTCL1P53675 1640 aa9.47□□□□□ -0.89
CCR9-201ENST00000355983 RAD54L2Q9Y4B4 1467 aa9.47□□□□□ -0.89
CCR9-201ENST00000355983 PRIM1P49642 420 aaKnown RBP9.47□□□□□ -0.89
CCR9-201ENST00000355983 MVPQ14764 893 aaKnown RBP9.47□□□□□ -0.89
CCR9-201ENST00000355983 PHF23Q9BUL5 403 aaPredicted RBP9.47□□□□□ -0.89
CCR9-201ENST00000355983 MYOM1P52179 1685 aa9.47□□□□□ -0.89
CCR9-201ENST00000355983 MBD3O95983 291 aa9.46□□□□□ -0.89
CCR9-201ENST00000355983 KNSTRNQ9Y448 316 aa9.46□□□□□ -0.89
CCR9-201ENST00000355983 IQGAP2Q13576 1575 aa9.46□□□□□ -0.89
CCR9-201ENST00000355983 IQSEC2Q5JU85 1478 aa9.46□□□□□ -0.9
CCR9-201ENST00000355983 TULP2O00295 520 aa9.46□□□□□ -0.9
CCR9-201ENST00000355983 WDR63Q8IWG1 891 aa9.46□□□□□ -0.9
CCR9-201ENST00000355983 BCL2L12Q9HB09 334 aa9.46□□□□□ -0.9
CCR9-201ENST00000355983 APAF1O14727 1248 aa9.45□□□□□ -0.9
CCR9-201ENST00000355983 NOLC1Q14978 699 aaKnown RBP eCLIP9.45□□□□□ -0.9
CCR9-201ENST00000355983 BMP2KLQ5H9B9 411 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms