RNA–Protein interactions for RNA: ENST00000339697.4

SERINC1-201, Transcript of serine incorporator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERINC1, Length 3,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERINC1-201ENST00000339697 SIRT1Q96EB6 747 aa13.86□□□□□ -0.19
SERINC1-201ENST00000339697 AMER1Q5JTC6 1135 aaPredicted RBP13.86□□□□□ -0.19
SERINC1-201ENST00000339697 YTHDC2Q9H6S0 1430 aaKnown RBP13.85□□□□□ -0.19
SERINC1-201ENST00000339697 RNF123Q5XPI4 1314 aa13.85□□□□□ -0.19
SERINC1-201ENST00000339697 ZMYM3Q14202 1370 aa13.84□□□□□ -0.19
SERINC1-201ENST00000339697 NALCNQ8IZF0 1738 aa13.84□□□□□ -0.19
SERINC1-201ENST00000339697 NSD2O96028 1365 aa13.84□□□□□ -0.19
SERINC1-201ENST00000339697 LRRC7Q96NW7 1537 aa13.84□□□□□ -0.19
SERINC1-201ENST00000339697 CFAP70Q5T0N1 1121 aa13.83□□□□□ -0.2
SERINC1-201ENST00000339697 RIMS2Q9UQ26 1411 aa13.83□□□□□ -0.2
SERINC1-201ENST00000339697 ABCC11Q96J66 1382 aa13.83□□□□□ -0.2
SERINC1-201ENST00000339697 GGT6Q6P531 493 aa13.83□□□□□ -0.2
SERINC1-201ENST00000339697 BCANQ96GW7 911 aa13.83□□□□□ -0.2
SERINC1-201ENST00000339697 PKNOX2Q96KN3 472 aa13.82□□□□□ -0.2
SERINC1-201ENST00000339697 ATP7BP35670 1465 aa13.82□□□□□ -0.2
SERINC1-201ENST00000339697 ITSN1Q15811 1721 aa13.81□□□□□ -0.2
SERINC1-201ENST00000339697 NLRP13Q86W25 1043 aa13.81□□□□□ -0.2
SERINC1-201ENST00000339697 CENPJQ9HC77 1338 aaPredicted RBP13.81□□□□□ -0.2
SERINC1-201ENST00000339697 POLR3GLQ9BT43 218 aa13.81□□□□□ -0.2
SERINC1-201ENST00000339697 NCBP3Q53F19 620 aaKnown RBP13.79□□□□□ -0.2
SERINC1-201ENST00000339697 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.79□□□□□ -0.2
SERINC1-201ENST00000339697 ANKRD36BQ8N2N9 1353 aa13.79□□□□□ -0.2
SERINC1-201ENST00000339697 ADAMTS13Q76LX8 1427 aa13.79□□□□□ -0.2
SERINC1-201ENST00000339697 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.78□□□□□ -0.2
SERINC1-201ENST00000339697 PLEKHG1Q9ULL1 1385 aa13.78□□□□□ -0.2
SERINC1-201ENST00000339697 COL3A1P02461 1466 aaPredicted RBP13.78□□□□□ -0.2
SERINC1-201ENST00000339697 IQSEC2Q5JU85 1478 aa13.78□□□□□ -0.2
SERINC1-201ENST00000339697 TNRQ92752 1358 aa13.77□□□□□ -0.2
SERINC1-201ENST00000339697 POLR3AO14802 1390 aaPredicted RBP13.77□□□□□ -0.2
SERINC1-201ENST00000339697 CEP170BQ9Y4F5 1589 aaPredicted RBP13.77□□□□□ -0.21
SERINC1-201ENST00000339697 CHD2O14647 1828 aaKnown RBP13.77□□□□□ -0.21
SERINC1-201ENST00000339697 PANK3Q9H999 370 aa13.77□□□□□ -0.21
SERINC1-201ENST00000339697 TMEM2Q9UHN6 1383 aa13.76□□□□□ -0.21
SERINC1-201ENST00000339697 PTCH1Q13635 1447 aa13.76□□□□□ -0.21
SERINC1-201ENST00000339697 PLEKHG5O94827 1062 aa13.76□□□□□ -0.21
SERINC1-201ENST00000339697 HNRNPUQ00839 825 aaKnown RBP eCLIP13.75□□□□□ -0.21
SERINC1-201ENST00000339697 MARF1Q9Y4F3 1742 aaKnown RBP13.75□□□□□ -0.21
SERINC1-201ENST00000339697 NWD1Q149M9 1564 aa13.74□□□□□ -0.21
SERINC1-201ENST00000339697 MRS2Q9HD23 443 aa13.74□□□□□ -0.21
SERINC1-201ENST00000339697 FANCIQ9NVI1 1328 aa13.74□□□□□ -0.21
SERINC1-201ENST00000339697 CPSF1Q10570 1443 aaKnown RBP13.74□□□□□ -0.21
SERINC1-201ENST00000339697 CNGB1Q14028 1251 aaPredicted RBP13.73□□□□□ -0.21
SERINC1-201ENST00000339697 ATAD2Q6PL18 1390 aa13.73□□□□□ -0.21
SERINC1-201ENST00000339697 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.73□□□□□ -0.21
SERINC1-201ENST00000339697 FMN2Q9NZ56 1722 aa13.72□□□□□ -0.21
SERINC1-201ENST00000339697 ZNF521Q96K83 1311 aa13.71□□□□□ -0.21
SERINC1-201ENST00000339697 FAM9BQ8IZU0 186 aa13.71□□□□□ -0.21
SERINC1-201ENST00000339697 CARD14Q9BXL6 1004 aa13.71□□□□□ -0.21
SERINC1-201ENST00000339697 FBXO31Q5XUX0 539 aaPredicted RBP13.71□□□□□ -0.21
SERINC1-201ENST00000339697 RGPD1P0DJD0 1748 aa13.69□□□□□ -0.22
SERINC1-201ENST00000339697 FKBP8Q14318 412 aa13.69□□□□□ -0.22
SERINC1-201ENST00000339697 PIK3R4Q99570 1358 aa13.69□□□□□ -0.22
SERINC1-201ENST00000339697 PDE3BQ13370 1112 aa13.69□□□□□ -0.22
SERINC1-201ENST00000339697 EVC2Q86UK5 1308 aa13.69□□□□□ -0.22
SERINC1-201ENST00000339697 PPP2R1AP30153 589 aa13.68□□□□□ -0.22
SERINC1-201ENST00000339697 PHRF1Q9P1Y6 1649 aaKnown RBP13.68□□□□□ -0.22
SERINC1-201ENST00000339697 PODXL2Q9NZ53 605 aa13.68□□□□□ -0.22
SERINC1-201ENST00000339697 NGEFQ8N5V2 710 aa13.68□□□□□ -0.22
SERINC1-201ENST00000339697 PNPLA6Q8IY17 1366 aa13.67□□□□□ -0.22
SERINC1-201ENST00000339697 NSD3Q9BZ95 1437 aa13.67□□□□□ -0.22
SERINC1-201ENST00000339697 METP08581 1390 aa13.65□□□□□ -0.22
SERINC1-201ENST00000339697 SETD1BQ9UPS6 1966 aaKnown RBP13.64□□□□□ -0.23
SERINC1-201ENST00000339697 RTN4Q9NQC3 1192 aaKnown RBP13.64□□□□□ -0.23
SERINC1-201ENST00000339697 SSH2Q76I76 1423 aa13.64□□□□□ -0.23
SERINC1-201ENST00000339697 A0A1W2PP64 1363 aa13.64□□□□□ -0.23
SERINC1-201ENST00000339697 PTPRUQ92729 1446 aa13.63□□□□□ -0.23
SERINC1-201ENST00000339697 IL27Q8NEV9 243 aa13.63□□□□□ -0.23
SERINC1-201ENST00000339697 KNSTRNQ9Y448 316 aa13.63□□□□□ -0.23
SERINC1-201ENST00000339697 TRMT2AQ8IZ69 625 aaKnown RBP13.63□□□□□ -0.23
SERINC1-201ENST00000339697 NUDCQ9Y266 331 aa13.63□□□□□ -0.23
SERINC1-201ENST00000339697 PHF23Q9BUL5 403 aaPredicted RBP13.62□□□□□ -0.23
SERINC1-201ENST00000339697 CGNL1Q0VF96 1302 aa13.62□□□□□ -0.23
SERINC1-201ENST00000339697 MAP2P11137 1827 aaKnown RBP13.62□□□□□ -0.23
SERINC1-201ENST00000339697 EDC4Q6P2E9 1401 aaKnown RBP13.61□□□□□ -0.23
SERINC1-201ENST00000339697 HDGFP51858 240 aaKnown RBP13.61□□□□□ -0.23
SERINC1-201ENST00000339697 TMC1Q8TDI8 760 aa13.61□□□□□ -0.23
SERINC1-201ENST00000339697 AATKQ6ZMQ8 1374 aa13.6□□□□□ -0.23
SERINC1-201ENST00000339697 NEFLP07196 543 aa13.59□□□□□ -0.23
SERINC1-201ENST00000339697 ANKARQ7Z5J8 1434 aa13.59□□□□□ -0.23
SERINC1-201ENST00000339697 TMEM132EQ6IEE7 984 aa13.59□□□□□ -0.23
SERINC1-201ENST00000339697 TRAK1Q9UPV9 953 aa13.59□□□□□ -0.23
SERINC1-201ENST00000339697 CDK12Q9NYV4 1490 aaPredicted RBP13.59□□□□□ -0.23
SERINC1-201ENST00000339697 RGPD8O14715 1765 aaPredicted RBP13.58□□□□□ -0.23
SERINC1-201ENST00000339697 MST1RQ04912 1400 aa13.57□□□□□ -0.24
SERINC1-201ENST00000339697 PLEKHH1Q9ULM0 1364 aa13.57□□□□□ -0.24
SERINC1-201ENST00000339697 PIK3C2AO00443 1686 aa13.57□□□□□ -0.24
SERINC1-201ENST00000339697 NBR1Q14596 966 aa13.56□□□□□ -0.24
SERINC1-201ENST00000339697 NKTRP30414 1462 aaKnown RBP13.56□□□□□ -0.24
SERINC1-201ENST00000339697 ROBO2Q9HCK4 1378 aa13.56□□□□□ -0.24
SERINC1-201ENST00000339697 TBX22Q9Y458 520 aa13.55□□□□□ -0.24
SERINC1-201ENST00000339697 SENP3-EIF4A1A0A087X0R7 540 aa13.55□□□□□ -0.24
SERINC1-201ENST00000339697 CHGAP10645 457 aaKnown RBP13.55□□□□□ -0.24
SERINC1-201ENST00000339697 PEAK1Q9H792 1746 aa13.55□□□□□ -0.24
SERINC1-201ENST00000339697 CCDC27Q2M243 656 aa13.55□□□□□ -0.24
SERINC1-201ENST00000339697 CAMTA1Q9Y6Y1 1673 aa13.54□□□□□ -0.24
SERINC1-201ENST00000339697 CC2D1BQ5T0F9 858 aaKnown RBP13.54□□□□□ -0.24
SERINC1-201ENST00000339697 OVOS2A0A0J9YW53 1432 aa13.54□□□□□ -0.24
SERINC1-201ENST00000339697 OVOS2Q6IE36 1432 aa13.54□□□□□ -0.24
SERINC1-201ENST00000339697 PRAM1Q96QH2 718 aa13.53□□□□□ -0.24
SERINC1-201ENST00000339697 DNAJC5Q9H3Z4 198 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms