RNA–Protein interactions for RNA: ENST00000323022.9

CACNA1F-201, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 1 (best) BASIC

Gene CACNA1F, Length 6,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-201ENST00000323022 RIPK4P57078 832 aa15.11■□□□□ 0.01
CACNA1F-201ENST00000323022 ZPR1O75312 459 aa15.11■□□□□ 0.01
CACNA1F-201ENST00000323022 PHF14O94880 888 aa15.11■□□□□ 0.01
CACNA1F-201ENST00000323022 WDR70Q9NW82 654 aa15.11■□□□□ 0.01
CACNA1F-201ENST00000323022 WDR78Q5VTH9 848 aa15.11■□□□□ 0.01
CACNA1F-201ENST00000323022 MRC2Q9UBG0 1479 aa15.1■□□□□ 0.01
CACNA1F-201ENST00000323022 MPHOSPH10O00566 681 aaKnown RBP15.1■□□□□ 0.01
CACNA1F-201ENST00000323022 TSHZ2Q9NRE2 1034 aa15.1■□□□□ 0.01
CACNA1F-201ENST00000323022 PPM1FP49593 454 aaPredicted RBP15.09■□□□□ 0.01
CACNA1F-201ENST00000323022 SPG7Q9UQ90 795 aa15.09■□□□□ 0.01
CACNA1F-201ENST00000323022 GRIN2BQ13224 1484 aa15.09■□□□□ 0.01
CACNA1F-201ENST00000323022 TMEM87AQ8NBN3 555 aa15.09■□□□□ 0.01
CACNA1F-201ENST00000323022 C8orf37Q96NL8 207 aa15.09■□□□□ 0.01
CACNA1F-201ENST00000323022 PTMSP20962 102 aa15.09■□□□□ 0.01
CACNA1F-201ENST00000323022 KIF3AQ9Y496 699 aa15.09■□□□□ 0.01
CACNA1F-201ENST00000323022 CFTRP13569 1480 aa15.09■□□□□ 0.01
CACNA1F-201ENST00000323022 CPLX1O14810 134 aa15.09■□□□□ 0.01
CACNA1F-201ENST00000323022 FOSBP53539 338 aa15.09■□□□□ 0.01
CACNA1F-201ENST00000323022 GBP4Q96PP9 640 aa15.09■□□□□ 0.01
CACNA1F-201ENST00000323022 PRAM1Q96QH2 718 aa15.09■□□□□ 0.01
CACNA1F-201ENST00000323022 CPLX2Q6PUV4 134 aaKnown RBP15.08■□□□□ 0.01
CACNA1F-201ENST00000323022 PCMTD1Q96MG8 357 aaPredicted RBP15.08■□□□□ 0
CACNA1F-201ENST00000323022 PPP6R1Q9UPN7 881 aa15.08■□□□□ 0
CACNA1F-201ENST00000323022 MYL6BP14649 208 aa15.07■□□□□ 0
CACNA1F-201ENST00000323022 SYAP1Q96A49 352 aaPredicted RBP15.07■□□□□ 0
CACNA1F-201ENST00000323022 ANKRD45Q5TZF3 282 aa15.07■□□□□ 0
CACNA1F-201ENST00000323022 RCAN3Q9UKA8 241 aa15.07■□□□□ 0
CACNA1F-201ENST00000323022 ZNF644Q9H582 1327 aaPredicted RBP15.06■□□□□ 0
CACNA1F-201ENST00000323022 TPM2P07951 284 aa15.06■□□□□ 0
CACNA1F-201ENST00000323022 GOLGA6L1Q8N7Z2 621 aa15.06■□□□□ 0
CACNA1F-201ENST00000323022 ECM2O94769 699 aaPredicted RBP15.05■□□□□ 0
CACNA1F-201ENST00000323022 TMOD2Q9NZR1 351 aa15.05■□□□□ 0
CACNA1F-201ENST00000323022 GNL3LQ9NVN8 582 aaKnown RBP15.05■□□□□ -0
CACNA1F-201ENST00000323022 MIA2Q96PC5 1412 aa15.05■□□□□ -0
CACNA1F-201ENST00000323022 FOXD4L6Q3SYB3 417 aaPredicted RBP15.05■□□□□ -0
CACNA1F-201ENST00000323022 FOXD4L3Q6VB84 417 aaPredicted RBP15.05■□□□□ -0
CACNA1F-201ENST00000323022 MTHFSP49914 203 aa15.05■□□□□ -0
CACNA1F-201ENST00000323022 ANO2Q9NQ90 1003 aa15.05■□□□□ -0
CACNA1F-201ENST00000323022 TBC1D2BQ9UPU7 963 aa15.04■□□□□ -0
CACNA1F-201ENST00000323022 RRP12Q5JTH9 1297 aaKnown RBP15.04■□□□□ -0
CACNA1F-201ENST00000323022 VSIG10Q8N0Z9 540 aa15.04■□□□□ -0
CACNA1F-201ENST00000323022 CHMP4CQ96CF2 233 aa15.04■□□□□ -0
CACNA1F-201ENST00000323022 MPHOSPH8Q99549 860 aa15.04■□□□□ -0
CACNA1F-201ENST00000323022 HMGXB3Q12766 1538 aa15.04■□□□□ -0
CACNA1F-201ENST00000323022 SCAPERQ9BY12 1400 aa15.04■□□□□ -0
CACNA1F-201ENST00000323022 HMGB2P26583 209 aaKnown RBP15.03■□□□□ -0
CACNA1F-201ENST00000323022 ZNF622Q969S3 477 aaKnown RBP eCLIP15.03■□□□□ -0
CACNA1F-201ENST00000323022 SLKQ9H2G2 1235 aaPredicted RBP15.03■□□□□ -0
CACNA1F-201ENST00000323022 CCDC47Q96A33 483 aaKnown RBP15.02■□□□□ -0
CACNA1F-201ENST00000323022 AK7Q96M32 723 aa15.02■□□□□ -0
CACNA1F-201ENST00000323022 TPM3P06753 285 aa15.02□□□□□ -0.01
CACNA1F-201ENST00000323022 ZNF530Q6P9A1 599 aaPredicted RBP15.02□□□□□ -0.01
CACNA1F-201ENST00000323022 DNAJC5BQ9UF47 199 aa15.02□□□□□ -0.01
CACNA1F-201ENST00000323022 DNAJC2Q99543 621 aaKnown RBP15.02□□□□□ -0.01
CACNA1F-201ENST00000323022 IFT140Q96RY7 1462 aa15.01□□□□□ -0.01
CACNA1F-201ENST00000323022 CSPP1Q1MSJ5 1256 aa15.01□□□□□ -0.01
CACNA1F-201ENST00000323022 CCDC85AQ96PX6 553 aaPredicted RBP15.01□□□□□ -0.01
CACNA1F-201ENST00000323022 SPINK5Q9NQ38 1064 aaPredicted RBP15.01□□□□□ -0.01
CACNA1F-201ENST00000323022 KIF15Q9NS87 1388 aa15.01□□□□□ -0.01
CACNA1F-201ENST00000323022 MPRIPQ6WCQ1 1025 aa15□□□□□ -0.01
CACNA1F-201ENST00000323022 SYNJ1O43426 1573 aa15□□□□□ -0.01
CACNA1F-201ENST00000323022 TSR1Q2NL82 804 aaKnown RBP15□□□□□ -0.01
CACNA1F-201ENST00000323022 TTC39AQ5SRH9 613 aa15□□□□□ -0.01
CACNA1F-201ENST00000323022 SLC3A2P08195 630 aaKnown RBP15□□□□□ -0.01
CACNA1F-201ENST00000323022 ZFYVE27Q5T4F4 411 aa15□□□□□ -0.01
CACNA1F-201ENST00000323022 RALYLQ86SE5 291 aaKnown RBP15□□□□□ -0.01
CACNA1F-201ENST00000323022 NBPF8Q3BBV2 869 aa15□□□□□ -0.01
CACNA1F-201ENST00000323022 NBPF14Q5TI25 921 aa15□□□□□ -0.01
CACNA1F-201ENST00000323022 CCER2I3L3R5 266 aa14.99□□□□□ -0.01
CACNA1F-201ENST00000323022 PTCD1O75127 700 aaKnown RBP14.99□□□□□ -0.01
CACNA1F-201ENST00000323022 CA8P35219 290 aa14.99□□□□□ -0.01
CACNA1F-201ENST00000323022 RUFY2Q8WXA3 655 aa14.99□□□□□ -0.01
CACNA1F-201ENST00000323022 TMOD3Q9NYL9 352 aa14.99□□□□□ -0.01
CACNA1F-201ENST00000323022 CDK19Q9BWU1 502 aa14.99□□□□□ -0.01
CACNA1F-201ENST00000323022 ODF2Q5BJF6 829 aa14.98□□□□□ -0.01
CACNA1F-201ENST00000323022 CT47A1Q5JQC4 288 aaPredicted RBP14.98□□□□□ -0.01
CACNA1F-201ENST00000323022 TOPBP1Q92547 1522 aa14.98□□□□□ -0.01
CACNA1F-201ENST00000323022 POLD1P28340 1107 aa14.98□□□□□ -0.01
CACNA1F-201ENST00000323022 ANKIB1Q9P2G1 1089 aa14.98□□□□□ -0.01
CACNA1F-201ENST00000323022 MYOM3Q5VTT5 1437 aa14.98□□□□□ -0.01
CACNA1F-201ENST00000323022 ARID3AQ99856 593 aa14.98□□□□□ -0.01
CACNA1F-201ENST00000323022 RPGRQ92834 1020 aaKnown RBP14.97□□□□□ -0.01
CACNA1F-201ENST00000323022 GZF1Q9H116 711 aaPredicted RBP14.97□□□□□ -0.01
CACNA1F-201ENST00000323022 HSPA2P54652 639 aa14.97□□□□□ -0.01
CACNA1F-201ENST00000323022 PLCD3Q8N3E9 789 aa14.97□□□□□ -0.01
CACNA1F-201ENST00000323022 GAS2L2Q8NHY3 880 aa14.97□□□□□ -0.01
CACNA1F-201ENST00000323022 CUX1P39880 1505 aa14.97□□□□□ -0.01
CACNA1F-201ENST00000323022 UBTFL1P0CB47 393 aaPredicted RBP14.96□□□□□ -0.01
CACNA1F-201ENST00000323022 TNNT3P45378 269 aaPredicted RBP14.96□□□□□ -0.01
CACNA1F-201ENST00000323022 FOXO3O43524 673 aa14.96□□□□□ -0.01
CACNA1F-201ENST00000323022 SYNJ2O15056 1496 aa14.96□□□□□ -0.01
CACNA1F-201ENST00000323022 ZKSCAN1P17029 563 aaPredicted RBP14.96□□□□□ -0.02
CACNA1F-201ENST00000323022 EXOC5O00471 708 aa14.96□□□□□ -0.02
CACNA1F-201ENST00000323022 KIF21BO75037 1637 aa14.95□□□□□ -0.02
CACNA1F-201ENST00000323022 CFAP70Q5T0N1 1121 aa14.95□□□□□ -0.02
CACNA1F-201ENST00000323022 SCLT1Q96NL6 688 aa14.95□□□□□ -0.02
CACNA1F-201ENST00000323022 ST18O60284 1047 aa14.94□□□□□ -0.02
CACNA1F-201ENST00000323022 STARD3NLO95772 234 aa14.94□□□□□ -0.02
CACNA1F-201ENST00000323022 ZKSCAN2Q63HK3 967 aa14.94□□□□□ -0.02
CACNA1F-201ENST00000323022 ZNF652Q9Y2D9 606 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms