RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 ROCK1Q13464 1354 aa4.63□□□□□ -1.67
GEN1-201ENST00000317402 SPTBN1Q01082 2364 aaKnown RBP4.63□□□□□ -1.67
GEN1-201ENST00000317402 NFKBIBQ15653 356 aa4.62□□□□□ -1.67
GEN1-201ENST00000317402 FAM135AQ9P2D6 1515 aa4.62□□□□□ -1.67
GEN1-201ENST00000317402 SCAPERQ9BY12 1400 aa4.62□□□□□ -1.67
GEN1-201ENST00000317402 LRRIQ1Q96JM4 1722 aa4.62□□□□□ -1.67
GEN1-201ENST00000317402 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.62□□□□□ -1.67
GEN1-201ENST00000317402 USP19O94966 1318 aa4.62□□□□□ -1.67
GEN1-201ENST00000317402 MYOM3Q5VTT5 1437 aa4.62□□□□□ -1.67
GEN1-201ENST00000317402 PLEKHD1A6NEE1 506 aa4.62□□□□□ -1.67
GEN1-201ENST00000317402 ARHGEF12Q9NZN5 1544 aa4.62□□□□□ -1.67
GEN1-201ENST00000317402 RCAN3Q9UKA8 241 aa4.62□□□□□ -1.67
GEN1-201ENST00000317402 USP47Q96K76 1375 aa4.62□□□□□ -1.67
GEN1-201ENST00000317402 KIF20BQ96Q89 1820 aa4.62□□□□□ -1.67
GEN1-201ENST00000317402 TCOF1Q13428 1488 aaKnown RBP4.62□□□□□ -1.67
GEN1-201ENST00000317402 SLC12A5Q9H2X9 1139 aa4.62□□□□□ -1.67
GEN1-201ENST00000317402 NACAE9PAV3 2078 aa4.62□□□□□ -1.67
GEN1-201ENST00000317402 SEC16AO15027 2179 aa4.61□□□□□ -1.67
GEN1-201ENST00000317402 WAPLQ7Z5K2 1190 aa4.61□□□□□ -1.67
GEN1-201ENST00000317402 HFM1A2PYH4 1435 aa4.61□□□□□ -1.67
GEN1-201ENST00000317402 FAM83GA6ND36 823 aa4.61□□□□□ -1.67
GEN1-201ENST00000317402 SMARCA5O60264 1052 aaPredicted RBP4.61□□□□□ -1.67
GEN1-201ENST00000317402 IPO9Q96P70 1041 aaKnown RBP4.61□□□□□ -1.67
GEN1-201ENST00000317402 PCDHB15Q9Y5E8 787 aa4.61□□□□□ -1.67
GEN1-201ENST00000317402 OTUD7AQ8TE49 926 aaPredicted RBP4.61□□□□□ -1.67
GEN1-201ENST00000317402 GGNBP2Q9H3C7 697 aa4.61□□□□□ -1.67
GEN1-201ENST00000317402 ADGRF5Q8IZF2 1346 aa4.61□□□□□ -1.67
GEN1-201ENST00000317402 INTS1Q8N201 2190 aaKnown RBP4.61□□□□□ -1.67
GEN1-201ENST00000317402 APC2O95996 2303 aa4.61□□□□□ -1.67
GEN1-201ENST00000317402 KIF14Q15058 1648 aa4.61□□□□□ -1.67
GEN1-201ENST00000317402 ARHGEF5Q12774 1597 aa4.61□□□□□ -1.67
GEN1-201ENST00000317402 MPDZO75970 2070 aa4.61□□□□□ -1.67
GEN1-201ENST00000317402 RAPGEF6Q8TEU7 1601 aa4.61□□□□□ -1.67
GEN1-201ENST00000317402 ZNF526Q8TF50 670 aaPredicted RBP4.61□□□□□ -1.67
GEN1-201ENST00000317402 SVILO95425 2214 aa4.61□□□□□ -1.67
GEN1-201ENST00000317402 CHGBP05060 677 aa4.61□□□□□ -1.67
GEN1-201ENST00000317402 XPCQ01831 940 aaPredicted RBP4.61□□□□□ -1.67
GEN1-201ENST00000317402 PKP1Q13835 747 aa4.61□□□□□ -1.67
GEN1-201ENST00000317402 UGGT1Q9NYU2 1555 aa4.61□□□□□ -1.67
GEN1-201ENST00000317402 ZNF407Q9C0G0 2248 aa4.6□□□□□ -1.67
GEN1-201ENST00000317402 KTN1Q86UP2 1357 aaKnown RBP4.6□□□□□ -1.67
GEN1-201ENST00000317402 CCER2I3L3R5 266 aa4.6□□□□□ -1.67
GEN1-201ENST00000317402 KCTD19Q17RG1 926 aaPredicted RBP4.6□□□□□ -1.67
GEN1-201ENST00000317402 AEBP2Q6ZN18 517 aaPredicted RBP4.6□□□□□ -1.67
GEN1-201ENST00000317402 DNMT1P26358 1616 aaKnown RBP4.6□□□□□ -1.67
GEN1-201ENST00000317402 EIF2AK4Q9P2K8 1649 aaKnown RBP4.6□□□□□ -1.67
GEN1-201ENST00000317402 PTPN23Q9H3S7 1636 aa4.6□□□□□ -1.67
GEN1-201ENST00000317402 ANKRD30BQ9BXX2 1392 aa4.6□□□□□ -1.67
GEN1-201ENST00000317402 MAP4K4O95819 1239 aaPredicted RBP4.6□□□□□ -1.67
GEN1-201ENST00000317402 STAC3Q96MF2 364 aa4.6□□□□□ -1.67
GEN1-201ENST00000317402 KIAA0556O60303 1618 aa4.6□□□□□ -1.67
GEN1-201ENST00000317402 CCDC88AQ3V6T2 1871 aa4.6□□□□□ -1.67
GEN1-201ENST00000317402 RSPH4AQ5TD94 716 aa4.6□□□□□ -1.67
GEN1-201ENST00000317402 VIRMAQ69YN4 1812 aaKnown RBP4.6□□□□□ -1.67
GEN1-201ENST00000317402 PCNTO95613 3336 aa4.6□□□□□ -1.67
GEN1-201ENST00000317402 ERBB4Q15303 1308 aa4.6□□□□□ -1.67
GEN1-201ENST00000317402 HMOX1P09601 288 aa4.6□□□□□ -1.67
GEN1-201ENST00000317402 RBM10P98175 930 aaKnown RBP4.6□□□□□ -1.67
GEN1-201ENST00000317402 DDRGK1Q96HY6 314 aa4.6□□□□□ -1.67
GEN1-201ENST00000317402 NEURL4Q96JN8 1562 aa4.6□□□□□ -1.67
GEN1-201ENST00000317402 ZMYM4Q5VZL5 1548 aa4.6□□□□□ -1.67
GEN1-201ENST00000317402 TSPYL6Q8N831 410 aa4.6□□□□□ -1.67
GEN1-201ENST00000317402 ZMYND15Q9H091 742 aa4.6□□□□□ -1.67
GEN1-201ENST00000317402 PER1O15534 1290 aaPredicted RBP4.59□□□□□ -1.67
GEN1-201ENST00000317402 CACNA1DQ01668 2161 aa4.59□□□□□ -1.67
GEN1-201ENST00000317402 PZPP20742 1482 aa4.59□□□□□ -1.67
GEN1-201ENST00000317402 NSFL1CQ9UNZ2 370 aaKnown RBP4.59□□□□□ -1.67
GEN1-201ENST00000317402 MYO5CQ9NQX4 1742 aa4.59□□□□□ -1.67
GEN1-201ENST00000317402 MINK1Q8N4C8 1332 aaPredicted RBP4.59□□□□□ -1.67
GEN1-201ENST00000317402 SYNJ2O15056 1496 aa4.59□□□□□ -1.67
GEN1-201ENST00000317402 DDX17Q92841 729 aaKnown RBP4.59□□□□□ -1.67
GEN1-201ENST00000317402 MIA3Q5JRA6 1907 aa4.59□□□□□ -1.67
GEN1-201ENST00000317402 LAMC1P11047 1609 aa4.59□□□□□ -1.67
GEN1-201ENST00000317402 TSPY4P0CV99 314 aa4.59□□□□□ -1.68
GEN1-201ENST00000317402 TSPY10P0CW01 314 aa4.59□□□□□ -1.68
GEN1-201ENST00000317402 L1TD1Q5T7N2 865 aaKnown RBP4.59□□□□□ -1.68
GEN1-201ENST00000317402 MFAP1P55081 439 aaKnown RBP4.59□□□□□ -1.68
GEN1-201ENST00000317402 FAM186AA6NE01 2351 aa4.59□□□□□ -1.68
GEN1-201ENST00000317402 KDM4AO75164 1064 aa4.58□□□□□ -1.68
GEN1-201ENST00000317402 BACH2Q9BYV9 841 aa4.58□□□□□ -1.68
GEN1-201ENST00000317402 DOCK9Q9BZ29 2069 aa4.58□□□□□ -1.68
GEN1-201ENST00000317402 DLG5Q8TDM6 1919 aa4.58□□□□□ -1.68
GEN1-201ENST00000317402 U2SURPO15042 1029 aaKnown RBP4.58□□□□□ -1.68
GEN1-201ENST00000317402 KIAA0100Q14667 2235 aaKnown RBP4.58□□□□□ -1.68
GEN1-201ENST00000317402 FANCIQ9NVI1 1328 aa4.58□□□□□ -1.68
GEN1-201ENST00000317402 NCOA1Q15788 1441 aa4.58□□□□□ -1.68
GEN1-201ENST00000317402 ROCK2O75116 1388 aaKnown RBP4.58□□□□□ -1.68
GEN1-201ENST00000317402 MAPK8IP2Q13387 824 aaPredicted RBP4.58□□□□□ -1.68
GEN1-201ENST00000317402 GAS2L3Q86XJ1 694 aa4.58□□□□□ -1.68
GEN1-201ENST00000317402 C17orf53Q8N3J3 647 aaPredicted RBP4.58□□□□□ -1.68
GEN1-201ENST00000317402 UACAQ9BZF9 1416 aa4.58□□□□□ -1.68
GEN1-201ENST00000317402 LOXHD1Q8IVV2 1947 aa4.58□□□□□ -1.68
GEN1-201ENST00000317402 PPP2R1AP30153 589 aa4.58□□□□□ -1.68
GEN1-201ENST00000317402 SPTBN2O15020 2390 aa4.58□□□□□ -1.68
GEN1-201ENST00000317402 MAGI2Q86UL8 1455 aa4.58□□□□□ -1.68
GEN1-201ENST00000317402 ARHGEF17Q96PE2 2063 aaPredicted RBP4.58□□□□□ -1.68
GEN1-201ENST00000317402 IGSF3O75054 1194 aa4.58□□□□□ -1.68
GEN1-201ENST00000317402 RBM27Q9P2N5 1060 aaKnown RBP4.58□□□□□ -1.68
GEN1-201ENST00000317402 SHROOM2Q13796 1616 aa4.58□□□□□ -1.68
GEN1-201ENST00000317402 SCN5AQ14524 2016 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms