RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 PPP4R2Q9NY27 417 aa10.31□□□□□ -0.76
PCDHB1-201ENST00000306549 CHMP3Q9Y3E7 222 aa10.31□□□□□ -0.76
PCDHB1-201ENST00000306549 CTDP1Q9Y5B0 961 aaPredicted RBP10.31□□□□□ -0.76
PCDHB1-201ENST00000306549 AMOTL1Q8IY63 956 aa10.3□□□□□ -0.76
PCDHB1-201ENST00000306549 KIF3AQ9Y496 699 aa10.3□□□□□ -0.76
PCDHB1-201ENST00000306549 GPATCH8Q9UKJ3 1502 aaKnown RBP10.3□□□□□ -0.76
PCDHB1-201ENST00000306549 CSPP1Q1MSJ5 1256 aa10.3□□□□□ -0.76
PCDHB1-201ENST00000306549 NOL10Q9BSC4 688 aaKnown RBP10.3□□□□□ -0.76
PCDHB1-201ENST00000306549 ESCO1Q5FWF5 840 aa10.3□□□□□ -0.76
PCDHB1-201ENST00000306549 UHRF1BP1LA0JNW5 1464 aa10.29□□□□□ -0.76
PCDHB1-201ENST00000306549 PLEKHO1Q53GL0 409 aaPredicted RBP10.29□□□□□ -0.76
PCDHB1-201ENST00000306549 NLRP6P59044 892 aa10.29□□□□□ -0.76
PCDHB1-201ENST00000306549 LTV1Q96GA3 475 aaPredicted RBP10.29□□□□□ -0.76
PCDHB1-201ENST00000306549 NCOA1Q15788 1441 aa10.29□□□□□ -0.76
PCDHB1-201ENST00000306549 TNRQ92752 1358 aa10.29□□□□□ -0.76
PCDHB1-201ENST00000306549 TRIM34Q9BYJ4 488 aa10.29□□□□□ -0.76
PCDHB1-201ENST00000306549 NUTM2FA1L443 756 aa10.29□□□□□ -0.76
PCDHB1-201ENST00000306549 PNISRQ8TF01 805 aaKnown RBP10.28□□□□□ -0.76
PCDHB1-201ENST00000306549 MSH6P52701 1360 aa10.28□□□□□ -0.76
PCDHB1-201ENST00000306549 MAPKBP1O60336 1514 aa10.28□□□□□ -0.76
PCDHB1-201ENST00000306549 CWC22Q9HCG8 908 aaKnown RBP10.28□□□□□ -0.76
PCDHB1-201ENST00000306549 CCDC61Q9Y6R9 512 aa10.28□□□□□ -0.76
PCDHB1-201ENST00000306549 TPM3P06753 285 aa10.28□□□□□ -0.76
PCDHB1-201ENST00000306549 DNMT1P26358 1616 aaKnown RBP10.27□□□□□ -0.76
PCDHB1-201ENST00000306549 SYCP2Q9BX26 1530 aa10.27□□□□□ -0.76
PCDHB1-201ENST00000306549 KIF16BQ96L93 1317 aa10.27□□□□□ -0.77
PCDHB1-201ENST00000306549 GNAI1P63096 354 aa10.27□□□□□ -0.77
PCDHB1-201ENST00000306549 RCAN3Q9UKA8 241 aa10.27□□□□□ -0.77
PCDHB1-201ENST00000306549 TOM1O60784 492 aa10.26□□□□□ -0.77
PCDHB1-201ENST00000306549 TATP17735 454 aaPredicted RBP10.26□□□□□ -0.77
PCDHB1-201ENST00000306549 GBP4Q96PP9 640 aa10.26□□□□□ -0.77
PCDHB1-201ENST00000306549 PDE4CQ08493 712 aa10.26□□□□□ -0.77
PCDHB1-201ENST00000306549 MAGI2Q86UL8 1455 aa10.26□□□□□ -0.77
PCDHB1-201ENST00000306549 SPG7Q9UQ90 795 aa10.26□□□□□ -0.77
PCDHB1-201ENST00000306549 NUP153P49790 1475 aaKnown RBP10.26□□□□□ -0.77
PCDHB1-201ENST00000306549 HSP90AB4PQ58FF6 505 aa10.26□□□□□ -0.77
PCDHB1-201ENST00000306549 RUNDC1Q96C34 613 aa10.25□□□□□ -0.77
PCDHB1-201ENST00000306549 ATP10AO60312 1499 aa10.25□□□□□ -0.77
PCDHB1-201ENST00000306549 NAIPQ13075 1403 aa10.25□□□□□ -0.77
PCDHB1-201ENST00000306549 PRAM1Q96QH2 718 aa10.25□□□□□ -0.77
PCDHB1-201ENST00000306549 TPM2P07951 284 aa10.25□□□□□ -0.77
PCDHB1-201ENST00000306549 TSR1Q2NL82 804 aaKnown RBP10.25□□□□□ -0.77
PCDHB1-201ENST00000306549 ABCC5O15440 1437 aa10.24□□□□□ -0.77
PCDHB1-201ENST00000306549 NLRP2Q9NX02 1062 aa10.24□□□□□ -0.77
PCDHB1-201ENST00000306549 ITPRIPQ8IWB1 547 aa10.24□□□□□ -0.77
PCDHB1-201ENST00000306549 API5Q9BZZ5 524 aaKnown RBP10.24□□□□□ -0.77
PCDHB1-201ENST00000306549 ATP7AQ04656 1500 aa10.24□□□□□ -0.77
PCDHB1-201ENST00000306549 BRD4O60885 1362 aaPredicted RBP10.24□□□□□ -0.77
PCDHB1-201ENST00000306549 C9orf78Q9NZ63 289 aaPredicted RBP10.24□□□□□ -0.77
PCDHB1-201ENST00000306549 MSH5O43196 834 aa10.23□□□□□ -0.77
PCDHB1-201ENST00000306549 PRDM11Q9NQV5 511 aa10.23□□□□□ -0.77
PCDHB1-201ENST00000306549 TOMM22Q9NS69 142 aa10.23□□□□□ -0.77
PCDHB1-201ENST00000306549 SHROOM2Q13796 1616 aa10.23□□□□□ -0.77
PCDHB1-201ENST00000306549 CT47B1P0C2W7 299 aaPredicted RBP10.22□□□□□ -0.77
PCDHB1-201ENST00000306549 ARHGEF5Q12774 1597 aa10.22□□□□□ -0.77
PCDHB1-201ENST00000306549 GCC2Q8IWJ2 1684 aa10.22□□□□□ -0.77
PCDHB1-201ENST00000306549 NSD2O96028 1365 aa10.22□□□□□ -0.77
PCDHB1-201ENST00000306549 AKAP17AQ02040 695 aaKnown RBP10.22□□□□□ -0.77
PCDHB1-201ENST00000306549 SYTL4Q96C24 671 aaPredicted RBP10.22□□□□□ -0.77
PCDHB1-201ENST00000306549 KIF6Q6ZMV9 814 aa10.22□□□□□ -0.77
PCDHB1-201ENST00000306549 ZCCHC11Q5TAX3 1644 aaKnown RBP10.22□□□□□ -0.77
PCDHB1-201ENST00000306549 CDK19Q9BWU1 502 aa10.22□□□□□ -0.77
PCDHB1-201ENST00000306549 MAST1Q9Y2H9 1570 aa10.21□□□□□ -0.78
PCDHB1-201ENST00000306549 ZNF428Q96B54 188 aa10.21□□□□□ -0.78
PCDHB1-201ENST00000306549 SUPT16HQ9Y5B9 1047 aaKnown RBP10.21□□□□□ -0.78
PCDHB1-201ENST00000306549 UHRF1BP1Q6BDS2 1440 aa10.21□□□□□ -0.78
PCDHB1-201ENST00000306549 VPS37DQ86XT2 251 aa10.21□□□□□ -0.78
PCDHB1-201ENST00000306549 APBB1O00213 710 aa10.21□□□□□ -0.78
PCDHB1-201ENST00000306549 ZFYVE16Q7Z3T8 1539 aa10.2□□□□□ -0.78
PCDHB1-201ENST00000306549 TPD52L1Q16890 204 aaPredicted RBP10.2□□□□□ -0.78
PCDHB1-201ENST00000306549 CREBRFQ8IUR6 639 aa10.2□□□□□ -0.78
PCDHB1-201ENST00000306549 RUFY2Q8WXA3 655 aa10.2□□□□□ -0.78
PCDHB1-201ENST00000306549 PREX2Q70Z35 1606 aa10.19□□□□□ -0.78
PCDHB1-201ENST00000306549 TPM1P09493 284 aa10.19□□□□□ -0.78
PCDHB1-201ENST00000306549 CCDC70Q6NSX1 233 aa10.19□□□□□ -0.78
PCDHB1-201ENST00000306549 ZKSCAN2Q63HK3 967 aa10.19□□□□□ -0.78
PCDHB1-201ENST00000306549 PHF14O94880 888 aa10.19□□□□□ -0.78
PCDHB1-201ENST00000306549 DDX19BQ9UMR2 479 aa10.19□□□□□ -0.78
PCDHB1-201ENST00000306549 RBM33Q96EV2 1170 aaKnown RBP10.19□□□□□ -0.78
PCDHB1-201ENST00000306549 TRIM6-TRIM34B2RNG4 842 aa10.19□□□□□ -0.78
PCDHB1-201ENST00000306549 ZBED9Q6R2W3 1325 aa10.19□□□□□ -0.78
PCDHB1-201ENST00000306549 C11orf95C9JLR9 678 aaPredicted RBP10.19□□□□□ -0.78
PCDHB1-201ENST00000306549 AMOTQ4VCS5 1084 aa10.19□□□□□ -0.78
PCDHB1-201ENST00000306549 CFAP70Q5T0N1 1121 aa10.19□□□□□ -0.78
PCDHB1-201ENST00000306549 TOM1L2Q6ZVM7 507 aa10.19□□□□□ -0.78
PCDHB1-201ENST00000306549 RPRD2Q5VT52 1461 aaKnown RBP10.19□□□□□ -0.78
PCDHB1-201ENST00000306549 HECW2Q9P2P5 1572 aa10.18□□□□□ -0.78
PCDHB1-201ENST00000306549 SF3A1Q15459 793 aaKnown RBP10.18□□□□□ -0.78
PCDHB1-201ENST00000306549 TNNT3P45378 269 aaPredicted RBP10.18□□□□□ -0.78
PCDHB1-201ENST00000306549 SYNE3Q6ZMZ3 975 aa10.18□□□□□ -0.78
PCDHB1-201ENST00000306549 CCDC30Q5VVM6 783 aa10.18□□□□□ -0.78
PCDHB1-201ENST00000306549 CCDC47Q96A33 483 aaKnown RBP10.18□□□□□ -0.78
PCDHB1-201ENST00000306549 CCDC43Q96MW1 224 aaKnown RBP10.18□□□□□ -0.78
PCDHB1-201ENST00000306549 SLC4A10Q6U841 1118 aa10.18□□□□□ -0.78
PCDHB1-201ENST00000306549 ZNF652Q9Y2D9 606 aa10.17□□□□□ -0.78
PCDHB1-201ENST00000306549 PES1O00541 588 aaKnown RBP10.17□□□□□ -0.78
PCDHB1-201ENST00000306549 RIPK4P57078 832 aa10.17□□□□□ -0.78
PCDHB1-201ENST00000306549 SCAF11Q99590 1463 aaKnown RBP10.17□□□□□ -0.78
PCDHB1-201ENST00000306549 NPHP3Q7Z494 1330 aa10.17□□□□□ -0.78
PCDHB1-201ENST00000306549 SETQ01105 290 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms