RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 SENP3Q9H4L4 574 aaPredicted RBP19.04■□□□□ 0.64
RAB40A-201ENST00000304236 PLEKHG1Q9ULL1 1385 aa19.04■□□□□ 0.64
RAB40A-201ENST00000304236 INSRP06213 1382 aa19.04■□□□□ 0.64
RAB40A-201ENST00000304236 TMEM131LA2VDJ0 1609 aa19.03■□□□□ 0.64
RAB40A-201ENST00000304236 MED1Q15648 1581 aaPredicted RBP19.02■□□□□ 0.63
RAB40A-201ENST00000304236 NKTRP30414 1462 aaKnown RBP19.01■□□□□ 0.63
RAB40A-201ENST00000304236 XIRP1Q702N8 1843 aaKnown RBP19.01■□□□□ 0.63
RAB40A-201ENST00000304236 TBX22Q9Y458 520 aa18.99■□□□□ 0.63
RAB40A-201ENST00000304236 PDE3BQ13370 1112 aa18.99■□□□□ 0.63
RAB40A-201ENST00000304236 FAM135BQ49AJ0 1406 aa18.99■□□□□ 0.63
RAB40A-201ENST00000304236 RBM33Q96EV2 1170 aaKnown RBP18.99■□□□□ 0.63
RAB40A-201ENST00000304236 CLTCL1P53675 1640 aa18.98■□□□□ 0.63
RAB40A-201ENST00000304236 MYO5BQ9ULV0 1848 aa18.98■□□□□ 0.63
RAB40A-201ENST00000304236 NWD1Q149M9 1564 aa18.98■□□□□ 0.63
RAB40A-201ENST00000304236 CDCA8Q53HL2 280 aa18.98■□□□□ 0.63
RAB40A-201ENST00000304236 PANK3Q9H999 370 aa18.98■□□□□ 0.63
RAB40A-201ENST00000304236 ANP32EQ9BTT0 268 aa18.97■□□□□ 0.63
RAB40A-201ENST00000304236 PHF23Q9BUL5 403 aaPredicted RBP18.97■□□□□ 0.63
RAB40A-201ENST00000304236 KIAA1210Q9ULL0 1709 aa18.97■□□□□ 0.63
RAB40A-201ENST00000304236 NUTM2DQ5VT03 806 aaPredicted RBP18.97■□□□□ 0.63
RAB40A-201ENST00000304236 B4GALNT3Q6L9W6 998 aa18.96■□□□□ 0.63
RAB40A-201ENST00000304236 MSH6P52701 1360 aa18.96■□□□□ 0.63
RAB40A-201ENST00000304236 FANCIQ9NVI1 1328 aa18.95■□□□□ 0.62
RAB40A-201ENST00000304236 SLC24A1O60721 1099 aa18.94■□□□□ 0.62
RAB40A-201ENST00000304236 EIF3AQ14152 1382 aaKnown RBP18.93■□□□□ 0.62
RAB40A-201ENST00000304236 ADAMTS13Q76LX8 1427 aa18.92■□□□□ 0.62
RAB40A-201ENST00000304236 CHD2O14647 1828 aaKnown RBP18.91■□□□□ 0.62
RAB40A-201ENST00000304236 PIK3R4Q99570 1358 aa18.91■□□□□ 0.62
RAB40A-201ENST00000304236 CC2D1BQ5T0F9 858 aaKnown RBP18.91■□□□□ 0.62
RAB40A-201ENST00000304236 DIP2AQ14689 1571 aa18.9■□□□□ 0.62
RAB40A-201ENST00000304236 SLAIN2Q9P270 581 aa18.9■□□□□ 0.62
RAB40A-201ENST00000304236 BLMP54132 1417 aaPredicted RBP18.9■□□□□ 0.62
RAB40A-201ENST00000304236 NCOA3Q9Y6Q9 1424 aa18.9■□□□□ 0.62
RAB40A-201ENST00000304236 MYOM2P54296 1465 aa18.9■□□□□ 0.62
RAB40A-201ENST00000304236 C14orf37Q86TY3 774 aa18.89■□□□□ 0.61
RAB40A-201ENST00000304236 KIF1BO60333 1816 aa18.89■□□□□ 0.61
RAB40A-201ENST00000304236 KNSTRNQ9Y448 316 aa18.88■□□□□ 0.61
RAB40A-201ENST00000304236 CCDC136Q96JN2 1154 aa18.87■□□□□ 0.61
RAB40A-201ENST00000304236 ROBO1Q9Y6N7 1651 aa18.87■□□□□ 0.61
RAB40A-201ENST00000304236 AMOTL2Q9Y2J4 779 aa18.86■□□□□ 0.61
RAB40A-201ENST00000304236 NPC1L1Q9UHC9 1359 aa18.84■□□□□ 0.61
RAB40A-201ENST00000304236 RRP1P56182 461 aaKnown RBP18.84■□□□□ 0.61
RAB40A-201ENST00000304236 C19orf44Q9H6X5 657 aa18.84■□□□□ 0.61
RAB40A-201ENST00000304236 RCAN3Q9UKA8 241 aa18.84■□□□□ 0.61
RAB40A-201ENST00000304236 CADPS2Q86UW7 1296 aa18.83■□□□□ 0.61
RAB40A-201ENST00000304236 IFT172Q9UG01 1749 aa18.83■□□□□ 0.6
RAB40A-201ENST00000304236 ATF3P18847 181 aa18.82■□□□□ 0.6
RAB40A-201ENST00000304236 ASXL1Q8IXJ9 1541 aa18.82■□□□□ 0.6
RAB40A-201ENST00000304236 PTPRUQ92729 1446 aa18.81■□□□□ 0.6
RAB40A-201ENST00000304236 SENP3-EIF4A1A0A087X0R7 540 aa18.81■□□□□ 0.6
RAB40A-201ENST00000304236 AMER1Q5JTC6 1135 aaPredicted RBP18.81■□□□□ 0.6
RAB40A-201ENST00000304236 SETBP1Q9Y6X0 1596 aa18.8■□□□□ 0.6
RAB40A-201ENST00000304236 NRXN1Q9ULB1 1477 aa18.79■□□□□ 0.6
RAB40A-201ENST00000304236 PPP2R1AP30153 589 aa18.79■□□□□ 0.6
RAB40A-201ENST00000304236 MYOM1P52179 1685 aa18.79■□□□□ 0.6
RAB40A-201ENST00000304236 PIK3C2GO75747 1445 aa18.78■□□□□ 0.6
RAB40A-201ENST00000304236 RGS17Q9UGC6 210 aaPredicted RBP18.78■□□□□ 0.6
RAB40A-201ENST00000304236 JCADQ9P266 1359 aa18.77■□□□□ 0.59
RAB40A-201ENST00000304236 SALL2Q9Y467 1007 aaPredicted RBP18.77■□□□□ 0.59
RAB40A-201ENST00000304236 NRXN3Q9Y4C0 1643 aa18.77■□□□□ 0.59
RAB40A-201ENST00000304236 METP08581 1390 aa18.76■□□□□ 0.59
RAB40A-201ENST00000304236 PHLPP1O60346 1717 aa18.76■□□□□ 0.59
RAB40A-201ENST00000304236 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.76■□□□□ 0.59
RAB40A-201ENST00000304236 NEXMIFQ5QGS0 1516 aa18.76■□□□□ 0.59
RAB40A-201ENST00000304236 SBNO2Q9Y2G9 1366 aa18.75■□□□□ 0.59
RAB40A-201ENST00000304236 VGFO15240 615 aaPredicted RBP18.75■□□□□ 0.59
RAB40A-201ENST00000304236 WDR43Q15061 677 aaKnown RBP eCLIP18.75■□□□□ 0.59
RAB40A-201ENST00000304236 CFAP70Q5T0N1 1121 aa18.75■□□□□ 0.59
RAB40A-201ENST00000304236 ADGRF5Q8IZF2 1346 aa18.75■□□□□ 0.59
RAB40A-201ENST00000304236 MSH5O43196 834 aa18.74■□□□□ 0.59
RAB40A-201ENST00000304236 RPGRIP1LQ68CZ1 1315 aa18.74■□□□□ 0.59
RAB40A-201ENST00000304236 ADAMTS8Q9UP79 889 aa18.73■□□□□ 0.59
RAB40A-201ENST00000304236 DCCP43146 1447 aa18.73■□□□□ 0.59
RAB40A-201ENST00000304236 XRN1Q8IZH2 1706 aaKnown RBP18.73■□□□□ 0.59
RAB40A-201ENST00000304236 CDCA7LQ96GN5 454 aa18.72■□□□□ 0.59
RAB40A-201ENST00000304236 BRINP3Q76B58 766 aa18.7■□□□□ 0.58
RAB40A-201ENST00000304236 COL16A1Q07092 1604 aaPredicted RBP18.7■□□□□ 0.58
RAB40A-201ENST00000304236 ERICH6Q7L0X2 663 aa18.7■□□□□ 0.58
RAB40A-201ENST00000304236 EXOC6Q8TAG9 804 aa18.7■□□□□ 0.58
RAB40A-201ENST00000304236 PPLO60437 1756 aa18.69■□□□□ 0.58
RAB40A-201ENST00000304236 SPATA31A6Q5VVP1 1343 aa18.69■□□□□ 0.58
RAB40A-201ENST00000304236 AHDC1Q5TGY3 1603 aaPredicted RBP18.69■□□□□ 0.58
RAB40A-201ENST00000304236 POTEAQ6S8J7 498 aa18.68■□□□□ 0.58
RAB40A-201ENST00000304236 ADGRL3Q9HAR2 1447 aa18.67■□□□□ 0.58
RAB40A-201ENST00000304236 CENPJQ9HC77 1338 aaPredicted RBP18.67■□□□□ 0.58
RAB40A-201ENST00000304236 C14orf93Q9H972 538 aaKnown RBP18.66■□□□□ 0.58
RAB40A-201ENST00000304236 MST1RQ04912 1400 aa18.66■□□□□ 0.58
RAB40A-201ENST00000304236 NGEFQ8N5V2 710 aa18.65■□□□□ 0.58
RAB40A-201ENST00000304236 MEX3CQ5U5Q3 659 aaKnown RBP18.64■□□□□ 0.58
RAB40A-201ENST00000304236 ZNF521Q96K83 1311 aa18.64■□□□□ 0.57
RAB40A-201ENST00000304236 TCERG1O14776 1098 aaKnown RBP18.64■□□□□ 0.57
RAB40A-201ENST00000304236 GOLGA2Q08379 1002 aa18.63■□□□□ 0.57
RAB40A-201ENST00000304236 PTCH1Q13635 1447 aa18.63■□□□□ 0.57
RAB40A-201ENST00000304236 PLEKHH1Q9ULM0 1364 aa18.62■□□□□ 0.57
RAB40A-201ENST00000304236 ROBO2Q9HCK4 1378 aa18.61■□□□□ 0.57
RAB40A-201ENST00000304236 ADGRB1O14514 1584 aa18.61■□□□□ 0.57
RAB40A-201ENST00000304236 DUSP27Q5VZP5 1158 aa18.61■□□□□ 0.57
RAB40A-201ENST00000304236 PUS7Q96PZ0 661 aaKnown RBP18.61■□□□□ 0.57
RAB40A-201ENST00000304236 QRICH2Q9H0J4 1663 aa18.6■□□□□ 0.57
RAB40A-201ENST00000304236 LRP6O75581 1613 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms