RNA–Protein interactions for RNA: ENST00000279052.10

ERGIC3-201, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 2,846 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-201ENST00000279052 FMN1Q68DA7 1419 aa13.09□□□□□ -0.31
ERGIC3-201ENST00000279052 CC2D2AQ9P2K1 1620 aa13.08□□□□□ -0.31
ERGIC3-201ENST00000279052 RBM25P49756 843 aaKnown RBP13.08□□□□□ -0.31
ERGIC3-201ENST00000279052 MNS1Q8NEH6 495 aa13.08□□□□□ -0.31
ERGIC3-201ENST00000279052 ZBTB12Q9Y330 459 aaPredicted RBP13.08□□□□□ -0.31
ERGIC3-201ENST00000279052 MTUS2Q5JR59 1369 aa13.08□□□□□ -0.32
ERGIC3-201ENST00000279052 TONSLQ96HA7 1378 aa13.08□□□□□ -0.32
ERGIC3-201ENST00000279052 TOPBP1Q92547 1522 aa13.08□□□□□ -0.32
ERGIC3-201ENST00000279052 PLEKHD1A6NEE1 506 aa13.08□□□□□ -0.32
ERGIC3-201ENST00000279052 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.08□□□□□ -0.32
ERGIC3-201ENST00000279052 FGD6Q6ZV73 1430 aa13.07□□□□□ -0.32
ERGIC3-201ENST00000279052 U2AF2P26368 475 aaKnown RBP eCLIP13.07□□□□□ -0.32
ERGIC3-201ENST00000279052 CREBRFQ8IUR6 639 aa13.07□□□□□ -0.32
ERGIC3-201ENST00000279052 TERF2Q15554 542 aa13.06□□□□□ -0.32
ERGIC3-201ENST00000279052 RASSF4Q9H2L5 321 aa13.06□□□□□ -0.32
ERGIC3-201ENST00000279052 SPINK5Q9NQ38 1064 aaPredicted RBP13.06□□□□□ -0.32
ERGIC3-201ENST00000279052 CUL7Q14999 1698 aa13.06□□□□□ -0.32
ERGIC3-201ENST00000279052 CALRP27797 417 aaKnown RBP13.05□□□□□ -0.32
ERGIC3-201ENST00000279052 MED4Q9NPJ6 270 aa13.05□□□□□ -0.32
ERGIC3-201ENST00000279052 MRVI1Q9Y6F6 885 aa13.04□□□□□ -0.32
ERGIC3-201ENST00000279052 CFAP65Q6ZU64 1925 aaKnown RBP13.04□□□□□ -0.32
ERGIC3-201ENST00000279052 CALR3Q96L12 384 aaKnown RBP13.04□□□□□ -0.32
ERGIC3-201ENST00000279052 CCDC18Q5T9S5 1454 aa13.04□□□□□ -0.32
ERGIC3-201ENST00000279052 SKOR2Q2VWA4 1001 aaPredicted RBP13.03□□□□□ -0.32
ERGIC3-201ENST00000279052 ZNF513Q8N8E2 541 aaPredicted RBP13.03□□□□□ -0.32
ERGIC3-201ENST00000279052 BCL2L12Q9HB09 334 aa13.03□□□□□ -0.32
ERGIC3-201ENST00000279052 CHMP5Q9NZZ3 219 aa13.03□□□□□ -0.32
ERGIC3-201ENST00000279052 CTTNBP2Q8WZ74 1663 aa13.02□□□□□ -0.32
ERGIC3-201ENST00000279052 RAD50Q92878 1312 aa13.02□□□□□ -0.33
ERGIC3-201ENST00000279052 NESP48681 1621 aa13.02□□□□□ -0.33
ERGIC3-201ENST00000279052 RAD51AP2Q09MP3 1159 aa13.02□□□□□ -0.33
ERGIC3-201ENST00000279052 SKAP1Q86WV1 359 aa13.02□□□□□ -0.33
ERGIC3-201ENST00000279052 TSC1Q92574 1164 aa13.02□□□□□ -0.33
ERGIC3-201ENST00000279052 TRERF1Q96PN7 1200 aa13.02□□□□□ -0.33
ERGIC3-201ENST00000279052 BORCS6Q96GS4 357 aa13.01□□□□□ -0.33
ERGIC3-201ENST00000279052 ZNF692Q9BU19 519 aaPredicted RBP13.01□□□□□ -0.33
ERGIC3-201ENST00000279052 SUFUQ9UMX1 484 aa13.01□□□□□ -0.33
ERGIC3-201ENST00000279052 ITFG2Q969R8 447 aa13.01□□□□□ -0.33
ERGIC3-201ENST00000279052 HFM1A2PYH4 1435 aa13.01□□□□□ -0.33
ERGIC3-201ENST00000279052 UACAQ9BZF9 1416 aa13.01□□□□□ -0.33
ERGIC3-201ENST00000279052 SNAPC4Q5SXM2 1469 aa13□□□□□ -0.33
ERGIC3-201ENST00000279052 CCDC189A1A4V9 331 aa13□□□□□ -0.33
ERGIC3-201ENST00000279052 HSP90AB1P08238 724 aaKnown RBP13□□□□□ -0.33
ERGIC3-201ENST00000279052 LRCH2Q5VUJ6 765 aa13□□□□□ -0.33
ERGIC3-201ENST00000279052 ANKRD7Q92527 254 aa13□□□□□ -0.33
ERGIC3-201ENST00000279052 PRKRIP1Q9H875 184 aaPredicted RBP13□□□□□ -0.33
ERGIC3-201ENST00000279052 PPP1R12AO14974 1030 aaPredicted RBP13□□□□□ -0.33
ERGIC3-201ENST00000279052 PNISRQ8TF01 805 aaKnown RBP13□□□□□ -0.33
ERGIC3-201ENST00000279052 JARID2Q92833 1246 aaPredicted RBP13□□□□□ -0.33
ERGIC3-201ENST00000279052 PDLIM2Q96JY6 352 aa13□□□□□ -0.33
ERGIC3-201ENST00000279052 TMX1Q9H3N1 280 aa13□□□□□ -0.33
ERGIC3-201ENST00000279052 ERICH4A6NGS2 130 aa12.99□□□□□ -0.33
ERGIC3-201ENST00000279052 DNAJC21Q5F1R6 531 aaKnown RBP12.99□□□□□ -0.33
ERGIC3-201ENST00000279052 CXorf56Q9H5V9 222 aa12.99□□□□□ -0.33
ERGIC3-201ENST00000279052 CCDC39Q9UFE4 941 aa12.99□□□□□ -0.33
ERGIC3-201ENST00000279052 TDRD9Q8NDG6 1382 aaKnown RBP12.99□□□□□ -0.33
ERGIC3-201ENST00000279052 MPHOSPH10O00566 681 aaKnown RBP12.99□□□□□ -0.33
ERGIC3-201ENST00000279052 PLCB2Q00722 1185 aa12.99□□□□□ -0.33
ERGIC3-201ENST00000279052 GOLGA6L6A8MZA4 724 aa12.98□□□□□ -0.33
ERGIC3-201ENST00000279052 PTPRKQ15262 1439 aa12.98□□□□□ -0.33
ERGIC3-201ENST00000279052 CNTLNQ9NXG0 1405 aa12.98□□□□□ -0.33
ERGIC3-201ENST00000279052 USP19O94966 1318 aa12.98□□□□□ -0.33
ERGIC3-201ENST00000279052 TNNT1P13805 278 aa12.98□□□□□ -0.33
ERGIC3-201ENST00000279052 KIAA2012Q0VF49 1180 aa12.98□□□□□ -0.33
ERGIC3-201ENST00000279052 IBTKQ9P2D0 1353 aaPredicted RBP12.98□□□□□ -0.33
ERGIC3-201ENST00000279052 NCOA2Q15596 1464 aa12.98□□□□□ -0.33
ERGIC3-201ENST00000279052 MYOM3Q5VTT5 1437 aa12.97□□□□□ -0.33
ERGIC3-201ENST00000279052 KIF3CO14782 793 aa12.97□□□□□ -0.33
ERGIC3-201ENST00000279052 CASQ1P31415 396 aa12.97□□□□□ -0.33
ERGIC3-201ENST00000279052 CENPQQ7L2Z9 268 aaPredicted RBP12.97□□□□□ -0.33
ERGIC3-201ENST00000279052 TOMM22Q9NS69 142 aa12.97□□□□□ -0.33
ERGIC3-201ENST00000279052 CCDC91Q7Z6B0 441 aa12.97□□□□□ -0.33
ERGIC3-201ENST00000279052 PTPN23Q9H3S7 1636 aa12.96□□□□□ -0.33
ERGIC3-201ENST00000279052 CCDC96Q2M329 555 aa12.96□□□□□ -0.33
ERGIC3-201ENST00000279052 NOL10Q9BSC4 688 aaKnown RBP12.96□□□□□ -0.33
ERGIC3-201ENST00000279052 NAIPQ13075 1403 aa12.96□□□□□ -0.33
ERGIC3-201ENST00000279052 BIRC2Q13490 618 aa12.96□□□□□ -0.34
ERGIC3-201ENST00000279052 KDM2BQ8NHM5 1336 aa12.96□□□□□ -0.34
ERGIC3-201ENST00000279052 KLHL33A6NCF5 533 aa12.95□□□□□ -0.34
ERGIC3-201ENST00000279052 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.95□□□□□ -0.34
ERGIC3-201ENST00000279052 KNSTRNQ9Y448 316 aa12.95□□□□□ -0.34
ERGIC3-201ENST00000279052 HNRNPH2P55795 449 aaKnown RBP12.95□□□□□ -0.34
ERGIC3-201ENST00000279052 GAPVD1Q14C86 1478 aa12.94□□□□□ -0.34
ERGIC3-201ENST00000279052 MTA1Q13330 715 aa12.94□□□□□ -0.34
ERGIC3-201ENST00000279052 TMTC2Q8N394 836 aa12.94□□□□□ -0.34
ERGIC3-201ENST00000279052 FAM210AQ96ND0 272 aa12.94□□□□□ -0.34
ERGIC3-201ENST00000279052 NBPF3Q9H094 633 aa12.94□□□□□ -0.34
ERGIC3-201ENST00000279052 DDX41Q9UJV9 622 aaKnown RBP12.94□□□□□ -0.34
ERGIC3-201ENST00000279052 RCAN3Q9UKA8 241 aa12.94□□□□□ -0.34
ERGIC3-201ENST00000279052 MORC2Q9Y6X9 1032 aaPredicted RBP12.94□□□□□ -0.34
ERGIC3-201ENST00000279052 VIRMAQ69YN4 1812 aaKnown RBP12.94□□□□□ -0.34
ERGIC3-201ENST00000279052 URB2Q14146 1524 aaKnown RBP12.94□□□□□ -0.34
ERGIC3-201ENST00000279052 SCAPERQ9BY12 1400 aa12.94□□□□□ -0.34
ERGIC3-201ENST00000279052 JMYQ8N9B5 988 aa12.94□□□□□ -0.34
ERGIC3-201ENST00000279052 GOLGA6L1Q8N7Z2 621 aa12.94□□□□□ -0.34
ERGIC3-201ENST00000279052 TBC1D2Q9BYX2 928 aa12.94□□□□□ -0.34
ERGIC3-201ENST00000279052 JRKLQ9Y4A0 524 aa12.94□□□□□ -0.34
ERGIC3-201ENST00000279052 SAMD9Q5K651 1589 aa12.93□□□□□ -0.34
ERGIC3-201ENST00000279052 GRIN2BQ13224 1484 aa12.93□□□□□ -0.34
ERGIC3-201ENST00000279052 TNPO1Q92973 898 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms