RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 KIAA1210Q9ULL0 1709 aa18.1■□□□□ 0.49
ACER3-201ENST00000278544 SETD1BQ9UPS6 1966 aaKnown RBP18.1■□□□□ 0.49
ACER3-201ENST00000278544 PTPRUQ92729 1446 aa18.09■□□□□ 0.49
ACER3-201ENST00000278544 FBLN1P23142 703 aa18.09■□□□□ 0.49
ACER3-201ENST00000278544 LAMC1P11047 1609 aa18.09■□□□□ 0.49
ACER3-201ENST00000278544 SETBP1Q9Y6X0 1596 aa18.08■□□□□ 0.49
ACER3-201ENST00000278544 SOX12O15370 315 aa18.08■□□□□ 0.49
ACER3-201ENST00000278544 QRICH2Q9H0J4 1663 aa18.08■□□□□ 0.48
ACER3-201ENST00000278544 TBX22Q9Y458 520 aa18.08■□□□□ 0.48
ACER3-201ENST00000278544 NRXN3Q9Y4C0 1643 aa18.08■□□□□ 0.48
ACER3-201ENST00000278544 HNRNPUQ00839 825 aaKnown RBP eCLIP18.07■□□□□ 0.48
ACER3-201ENST00000278544 GGNBP2Q9H3C7 697 aa18.07■□□□□ 0.48
ACER3-201ENST00000278544 KTN1Q86UP2 1357 aaKnown RBP18.06■□□□□ 0.48
ACER3-201ENST00000278544 WASLO00401 505 aaPredicted RBP18.06■□□□□ 0.48
ACER3-201ENST00000278544 ABCC11Q96J66 1382 aa18.06■□□□□ 0.48
ACER3-201ENST00000278544 ARHGEF28Q8N1W1 1705 aaKnown RBP18.05■□□□□ 0.48
ACER3-201ENST00000278544 NUDT16Q96DE0 195 aaKnown RBP18.05■□□□□ 0.48
ACER3-201ENST00000278544 TULP4Q9NRJ4 1543 aa18.04■□□□□ 0.48
ACER3-201ENST00000278544 NSD3Q9BZ95 1437 aa18.04■□□□□ 0.48
ACER3-201ENST00000278544 CCER2I3L3R5 266 aa18.03■□□□□ 0.48
ACER3-201ENST00000278544 AMER1Q5JTC6 1135 aaPredicted RBP18.03■□□□□ 0.48
ACER3-201ENST00000278544 PPM1GO15355 546 aaPredicted RBP18.02■□□□□ 0.48
ACER3-201ENST00000278544 ZRANB1Q9UGI0 708 aa18.02■□□□□ 0.48
ACER3-201ENST00000278544 ARHGAP23Q9P227 1491 aa18.02■□□□□ 0.48
ACER3-201ENST00000278544 POLR1AO95602 1720 aaPredicted RBP18.02■□□□□ 0.48
ACER3-201ENST00000278544 CENPBP07199 599 aaPredicted RBP18.01■□□□□ 0.47
ACER3-201ENST00000278544 PROSER2Q86WR7 435 aaPredicted RBP18.01■□□□□ 0.47
ACER3-201ENST00000278544 MORC1Q86VD1 984 aa18.01■□□□□ 0.47
ACER3-201ENST00000278544 SLIT1O75093 1534 aa18.01■□□□□ 0.47
ACER3-201ENST00000278544 PRR36Q9H6K5 1346 aa18■□□□□ 0.47
ACER3-201ENST00000278544 NUTM2GQ5VZR2 741 aa18■□□□□ 0.47
ACER3-201ENST00000278544 SLC24A1O60721 1099 aa17.99■□□□□ 0.47
ACER3-201ENST00000278544 XPCQ01831 940 aaPredicted RBP17.99■□□□□ 0.47
ACER3-201ENST00000278544 KDM5AP29375 1690 aaKnown RBP17.99■□□□□ 0.47
ACER3-201ENST00000278544 A0A1W2PP64 1363 aa17.99■□□□□ 0.47
ACER3-201ENST00000278544 NPHP4O75161 1426 aaPredicted RBP17.99■□□□□ 0.47
ACER3-201ENST00000278544 SBNO2Q9Y2G9 1366 aa17.98■□□□□ 0.47
ACER3-201ENST00000278544 MYBBP1AQ9BQG0 1328 aaKnown RBP17.98■□□□□ 0.47
ACER3-201ENST00000278544 HDGFL2Q7Z4V5 671 aaPredicted RBP17.98■□□□□ 0.47
ACER3-201ENST00000278544 TERF2IPQ9NYB0 399 aa17.98■□□□□ 0.47
ACER3-201ENST00000278544 RALBP1Q15311 655 aa17.97■□□□□ 0.47
ACER3-201ENST00000278544 NGDNQ8NEJ9 315 aaKnown RBP17.97■□□□□ 0.47
ACER3-201ENST00000278544 CCDC61Q9Y6R9 512 aa17.97■□□□□ 0.47
ACER3-201ENST00000278544 PAK3O75914 559 aaPredicted RBP17.96■□□□□ 0.47
ACER3-201ENST00000278544 PPP2R1AP30153 589 aa17.96■□□□□ 0.47
ACER3-201ENST00000278544 SETD1AO15047 1707 aaKnown RBP17.96■□□□□ 0.47
ACER3-201ENST00000278544 NME9Q86XW9 330 aa17.95■□□□□ 0.46
ACER3-201ENST00000278544 LMOD2Q6P5Q4 547 aa17.95■□□□□ 0.46
ACER3-201ENST00000278544 PPIP5K1Q6PFW1 1433 aa17.94■□□□□ 0.46
ACER3-201ENST00000278544 NLRP13Q86W25 1043 aa17.94■□□□□ 0.46
ACER3-201ENST00000278544 ESCO1Q5FWF5 840 aa17.93■□□□□ 0.46
ACER3-201ENST00000278544 CGNL1Q0VF96 1302 aa17.93■□□□□ 0.46
ACER3-201ENST00000278544 ATAD2Q6PL18 1390 aa17.93■□□□□ 0.46
ACER3-201ENST00000278544 MED14O60244 1454 aa17.92■□□□□ 0.46
ACER3-201ENST00000278544 ACEP12821 1306 aa17.92■□□□□ 0.46
ACER3-201ENST00000278544 MYOM1P52179 1685 aa17.92■□□□□ 0.46
ACER3-201ENST00000278544 FYB1O15117 783 aa17.92■□□□□ 0.46
ACER3-201ENST00000278544 DDX17Q92841 729 aaKnown RBP17.92■□□□□ 0.46
ACER3-201ENST00000278544 ZNF335Q9H4Z2 1342 aaPredicted RBP17.91■□□□□ 0.46
ACER3-201ENST00000278544 CCDC146Q8IYE0 955 aa17.91■□□□□ 0.46
ACER3-201ENST00000278544 PARD3Q8TEW0 1356 aa17.91■□□□□ 0.46
ACER3-201ENST00000278544 ZBTB7CA1YPR0 619 aa17.9■□□□□ 0.46
ACER3-201ENST00000278544 ORAI2Q96SN7 254 aa17.9■□□□□ 0.46
ACER3-201ENST00000278544 ANKRD36BQ8N2N9 1353 aa17.9■□□□□ 0.46
ACER3-201ENST00000278544 PNISRQ8TF01 805 aaKnown RBP17.9■□□□□ 0.46
ACER3-201ENST00000278544 MTHFSP49914 203 aa17.89■□□□□ 0.45
ACER3-201ENST00000278544 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.88■□□□□ 0.45
ACER3-201ENST00000278544 FOXO3O43524 673 aa17.88■□□□□ 0.45
ACER3-201ENST00000278544 FAM135BQ49AJ0 1406 aa17.88■□□□□ 0.45
ACER3-201ENST00000278544 RRS1Q15050 365 aaKnown RBP17.87■□□□□ 0.45
ACER3-201ENST00000278544 ADAMTS8Q9UP79 889 aa17.86■□□□□ 0.45
ACER3-201ENST00000278544 TECPR2O15040 1411 aa17.86■□□□□ 0.45
ACER3-201ENST00000278544 WDR43Q15061 677 aaKnown RBP eCLIP17.86■□□□□ 0.457e-25■■■■■ 56.8
ACER3-201ENST00000278544 NEUROD2Q15784 382 aa17.85■□□□□ 0.45
ACER3-201ENST00000278544 SCAF1Q9H7N4 1312 aaKnown RBP17.85■□□□□ 0.45
ACER3-201ENST00000278544 DLC1Q96QB1 1528 aa17.85■□□□□ 0.45
ACER3-201ENST00000278544 LMTK3Q96Q04 1460 aa17.85■□□□□ 0.45
ACER3-201ENST00000278544 SIRT1Q96EB6 747 aa17.85■□□□□ 0.45
ACER3-201ENST00000278544 U2SURPO15042 1029 aaKnown RBP17.84■□□□□ 0.45
ACER3-201ENST00000278544 ZNF142P52746 1687 aaPredicted RBP17.84■□□□□ 0.45
ACER3-201ENST00000278544 TMEM94Q12767 1356 aa17.83■□□□□ 0.44
ACER3-201ENST00000278544 CD163L1Q9NR16 1453 aa17.83■□□□□ 0.44
ACER3-201ENST00000278544 EMILIN1Q9Y6C2 1016 aa17.82■□□□□ 0.44
ACER3-201ENST00000278544 CPS1P31327 1500 aa17.82■□□□□ 0.44
ACER3-201ENST00000278544 PSME1Q06323 249 aa17.81■□□□□ 0.44
ACER3-201ENST00000278544 ATP7BP35670 1465 aa17.81■□□□□ 0.44
ACER3-201ENST00000278544 ATF3P18847 181 aa17.81■□□□□ 0.44
ACER3-201ENST00000278544 PHF8Q9UPP1 1060 aa17.81■□□□□ 0.44
ACER3-201ENST00000278544 BRD4O60885 1362 aaPredicted RBP17.81■□□□□ 0.44
ACER3-201ENST00000278544 COG3Q96JB2 828 aa17.8■□□□□ 0.44
ACER3-201ENST00000278544 GTF3C3Q9Y5Q9 886 aa17.8■□□□□ 0.44
ACER3-201ENST00000278544 NLRP6P59044 892 aa17.79■□□□□ 0.44
ACER3-201ENST00000278544 PUS7Q96PZ0 661 aaKnown RBP17.79■□□□□ 0.44
ACER3-201ENST00000278544 RRP7AQ9Y3A4 280 aaKnown RBP17.79■□□□□ 0.44
ACER3-201ENST00000278544 ABTB2Q8N961 1025 aa17.78■□□□□ 0.44
ACER3-201ENST00000278544 PTCH1Q13635 1447 aa17.78■□□□□ 0.44
ACER3-201ENST00000278544 TTC21BQ7Z4L5 1316 aa17.78■□□□□ 0.44
ACER3-201ENST00000278544 RGPD8O14715 1765 aaPredicted RBP17.78■□□□□ 0.44
ACER3-201ENST00000278544 U2AF1L5P0DN76 240 aaPredicted RBP17.77■□□□□ 0.44
ACER3-201ENST00000278544 U2AF1Q01081 240 aaKnown RBP eCLIP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms