RNA–Protein interactions for RNA: ENST00000269919.10

PGPEP1-202, Transcript of pyroglutamyl-peptidase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGPEP1, Length 7,092 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGPEP1-202ENST00000269919 ARAP1Q96P48 1450 aa13.52□□□□□ -0.25
PGPEP1-202ENST00000269919 IBSPP21815 317 aaPredicted RBP13.52□□□□□ -0.25
PGPEP1-202ENST00000269919 ZKSCAN1P17029 563 aaPredicted RBP13.51□□□□□ -0.25
PGPEP1-202ENST00000269919 TTLL12Q14166 644 aaPredicted RBP13.51□□□□□ -0.25
PGPEP1-202ENST00000269919 AKNAQ7Z591 1439 aa13.51□□□□□ -0.25
PGPEP1-202ENST00000269919 RAD54L2Q9Y4B4 1467 aa13.51□□□□□ -0.25
PGPEP1-202ENST00000269919 CCDC39Q9UFE4 941 aa13.51□□□□□ -0.25
PGPEP1-202ENST00000269919 IKQ13123 557 aaPredicted RBP13.51□□□□□ -0.25
PGPEP1-202ENST00000269919 GAPVD1Q14C86 1478 aa13.51□□□□□ -0.25
PGPEP1-202ENST00000269919 SMG6Q86US8 1419 aaKnown RBP13.51□□□□□ -0.25
PGPEP1-202ENST00000269919 PAF1Q8N7H5 531 aa13.51□□□□□ -0.25
PGPEP1-202ENST00000269919 MYCNP04198 464 aaPredicted RBP13.51□□□□□ -0.25
PGPEP1-202ENST00000269919 GNAI1P63096 354 aa13.51□□□□□ -0.25
PGPEP1-202ENST00000269919 FAM177BA6PVY3 158 aa13.5□□□□□ -0.25
PGPEP1-202ENST00000269919 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.5□□□□□ -0.255e-7■■■■■ 74.6
PGPEP1-202ENST00000269919 IFIT2P09913 472 aaKnown RBP13.5□□□□□ -0.25
PGPEP1-202ENST00000269919 CCAR2Q8N163 923 aaKnown RBP13.5□□□□□ -0.25
PGPEP1-202ENST00000269919 ANKRD50Q9ULJ7 1429 aa13.5□□□□□ -0.25
PGPEP1-202ENST00000269919 BRPF3Q9ULD4 1205 aa13.49□□□□□ -0.25
PGPEP1-202ENST00000269919 SMC3Q9UQE7 1217 aa13.49□□□□□ -0.25
PGPEP1-202ENST00000269919 R3HCC1Q9Y3T6 440 aaKnown RBP13.49□□□□□ -0.25
PGPEP1-202ENST00000269919 FYB1O15117 783 aa13.49□□□□□ -0.25
PGPEP1-202ENST00000269919 TMEM87AQ8NBN3 555 aa13.49□□□□□ -0.25
PGPEP1-202ENST00000269919 TRAK2O60296 914 aa13.49□□□□□ -0.25
PGPEP1-202ENST00000269919 PPP2R1AP30153 589 aa13.49□□□□□ -0.25
PGPEP1-202ENST00000269919 EIF2S2P20042 333 aaKnown RBP13.49□□□□□ -0.25
PGPEP1-202ENST00000269919 NASPP49321 788 aaPredicted RBP13.49□□□□□ -0.25
PGPEP1-202ENST00000269919 AKAP17AQ02040 695 aaKnown RBP13.49□□□□□ -0.25
PGPEP1-202ENST00000269919 BICD2Q8TD16 824 aa13.49□□□□□ -0.25
PGPEP1-202ENST00000269919 RBM5P52756 815 aaKnown RBP eCLIP13.48□□□□□ -0.25
PGPEP1-202ENST00000269919 GPS2Q13227 327 aa13.48□□□□□ -0.25
PGPEP1-202ENST00000269919 PDZRN3Q9UPQ7 1066 aa13.48□□□□□ -0.25
PGPEP1-202ENST00000269919 PES1O00541 588 aaKnown RBP13.48□□□□□ -0.25
PGPEP1-202ENST00000269919 TEFQ10587 303 aa13.48□□□□□ -0.25
PGPEP1-202ENST00000269919 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.47□□□□□ -0.25
PGPEP1-202ENST00000269919 NECTIN2Q92692 538 aa13.47□□□□□ -0.25
PGPEP1-202ENST00000269919 TPM1P09493 284 aa13.47□□□□□ -0.25
PGPEP1-202ENST00000269919 SETQ01105 290 aaPredicted RBP13.47□□□□□ -0.25
PGPEP1-202ENST00000269919 STAC3Q96MF2 364 aa13.47□□□□□ -0.25
PGPEP1-202ENST00000269919 C9orf78Q9NZ63 289 aaPredicted RBP13.47□□□□□ -0.25
PGPEP1-202ENST00000269919 TSR1Q2NL82 804 aaKnown RBP13.47□□□□□ -0.25
PGPEP1-202ENST00000269919 RBM42Q9BTD8 480 aaKnown RBP13.47□□□□□ -0.25
PGPEP1-202ENST00000269919 VPS37CA5D8V6 355 aaPredicted RBP13.47□□□□□ -0.25
PGPEP1-202ENST00000269919 RNF20Q5VTR2 975 aa13.46□□□□□ -0.25
PGPEP1-202ENST00000269919 TPM2P07951 284 aa13.46□□□□□ -0.25
PGPEP1-202ENST00000269919 SASS6Q6UVJ0 657 aa13.46□□□□□ -0.25
PGPEP1-202ENST00000269919 ESCO1Q5FWF5 840 aa13.46□□□□□ -0.25
PGPEP1-202ENST00000269919 BACH2Q9BYV9 841 aa13.46□□□□□ -0.26
PGPEP1-202ENST00000269919 CCDC27Q2M243 656 aa13.45□□□□□ -0.26
PGPEP1-202ENST00000269919 SYNE3Q6ZMZ3 975 aa13.45□□□□□ -0.26
PGPEP1-202ENST00000269919 RAPGEF4Q8WZA2 1011 aa13.45□□□□□ -0.26
PGPEP1-202ENST00000269919 NLRP2Q9NX02 1062 aa13.45□□□□□ -0.26
PGPEP1-202ENST00000269919 FKBP5Q13451 457 aaPredicted RBP13.45□□□□□ -0.26
PGPEP1-202ENST00000269919 NUTM2GQ5VZR2 741 aa13.45□□□□□ -0.26
PGPEP1-202ENST00000269919 TRIM29Q14134 588 aa13.45□□□□□ -0.26
PGPEP1-202ENST00000269919 MAP3K9P80192 1104 aa13.45□□□□□ -0.26
PGPEP1-202ENST00000269919 NEXNQ0ZGT2 675 aa13.44□□□□□ -0.26
PGPEP1-202ENST00000269919 IL27Q8NEV9 243 aa13.44□□□□□ -0.26
PGPEP1-202ENST00000269919 PRDM2Q13029 1718 aa13.44□□□□□ -0.26
PGPEP1-202ENST00000269919 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.44□□□□□ -0.26
PGPEP1-202ENST00000269919 HMOX1P09601 288 aa13.44□□□□□ -0.26
PGPEP1-202ENST00000269919 LRRFIP1Q32MZ4 808 aaKnown RBP13.44□□□□□ -0.26
PGPEP1-202ENST00000269919 TEX35Q5T0J7 233 aa13.44□□□□□ -0.26
PGPEP1-202ENST00000269919 SYNJ1O43426 1573 aa13.44□□□□□ -0.26
PGPEP1-202ENST00000269919 CCDC70Q6NSX1 233 aa13.43□□□□□ -0.26
PGPEP1-202ENST00000269919 TSPYL4Q9UJ04 414 aa13.43□□□□□ -0.26
PGPEP1-202ENST00000269919 IFT57Q9NWB7 429 aa13.43□□□□□ -0.26
PGPEP1-202ENST00000269919 EHBP1L1Q8N3D4 1523 aa13.43□□□□□ -0.26
PGPEP1-202ENST00000269919 CCDC173Q0VFZ6 552 aa13.43□□□□□ -0.26
PGPEP1-202ENST00000269919 HOMER1Q86YM7 354 aa13.43□□□□□ -0.26
PGPEP1-202ENST00000269919 G3BP1Q13283 466 aaKnown RBP eCLIP13.43□□□□□ -0.26
PGPEP1-202ENST00000269919 ERC2O15083 957 aa13.43□□□□□ -0.26
PGPEP1-202ENST00000269919 HSP90AB4PQ58FF6 505 aa13.43□□□□□ -0.26
PGPEP1-202ENST00000269919 LETM1O95202 739 aaPredicted RBP13.42□□□□□ -0.26
PGPEP1-202ENST00000269919 TCP11L2Q8N4U5 519 aa13.42□□□□□ -0.26
PGPEP1-202ENST00000269919 GGNBP2Q9H3C7 697 aa13.42□□□□□ -0.26
PGPEP1-202ENST00000269919 NINLQ9Y2I6 1382 aa13.42□□□□□ -0.26
PGPEP1-202ENST00000269919 PDE3AQ14432 1141 aa13.42□□□□□ -0.26
PGPEP1-202ENST00000269919 KIF6Q6ZMV9 814 aa13.42□□□□□ -0.26
PGPEP1-202ENST00000269919 WDR97A6NE52 1622 aa13.42□□□□□ -0.26
PGPEP1-202ENST00000269919 CAVIN1Q6NZI2 390 aaKnown RBP13.42□□□□□ -0.26
PGPEP1-202ENST00000269919 TSPY26PQ9H489 355 aa13.42□□□□□ -0.26
PGPEP1-202ENST00000269919 CABP2Q9NPB3 220 aa13.42□□□□□ -0.26
PGPEP1-202ENST00000269919 CFTRP13569 1480 aa13.42□□□□□ -0.26
PGPEP1-202ENST00000269919 APPP05067 770 aa13.41□□□□□ -0.26
PGPEP1-202ENST00000269919 NBPF8Q3BBV2 869 aa13.41□□□□□ -0.26
PGPEP1-202ENST00000269919 BCAR3O75815 825 aa13.41□□□□□ -0.26
PGPEP1-202ENST00000269919 CPLX1O14810 134 aa13.41□□□□□ -0.26
PGPEP1-202ENST00000269919 CPLX2Q6PUV4 134 aaKnown RBP13.41□□□□□ -0.26
PGPEP1-202ENST00000269919 FOSBP53539 338 aa13.41□□□□□ -0.26
PGPEP1-202ENST00000269919 HOOK1Q9UJC3 728 aaKnown RBP13.41□□□□□ -0.26
PGPEP1-202ENST00000269919 SCAPERQ9BY12 1400 aa13.41□□□□□ -0.26
PGPEP1-202ENST00000269919 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.4□□□□□ -0.26
PGPEP1-202ENST00000269919 DDX58O95786 925 aaKnown RBP13.4□□□□□ -0.26
PGPEP1-202ENST00000269919 EXOSC9Q06265 439 aaKnown RBP13.4□□□□□ -0.26
PGPEP1-202ENST00000269919 PNISRQ8TF01 805 aaKnown RBP13.4□□□□□ -0.26
PGPEP1-202ENST00000269919 KIAA1107Q9UPP5 1409 aa13.4□□□□□ -0.26
PGPEP1-202ENST00000269919 CCDC73Q6ZRK6 1079 aa13.4□□□□□ -0.26
PGPEP1-202ENST00000269919 MTHFSP49914 203 aa13.4□□□□□ -0.27
PGPEP1-202ENST00000269919 RNF214Q8ND24 703 aa13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms