RNA–Protein interactions for RNA: ENSMUST00000221370.1

Trim9-208, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 2,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-208ENSMUST00000221370 PrkcshO08795 521 aa27.6■■■□□ 2.01
Trim9-208ENSMUST00000221370 Sipa1l1Q8C0T5 1782 aa27.6■■■□□ 2.01
Trim9-208ENSMUST00000221370 Znf521Q6KAS7 1311 aa27.6■■■□□ 2.01
Trim9-208ENSMUST00000221370 Ehbp1l1Q99MS7 1716 aa27.59■■■□□ 2.01
Trim9-208ENSMUST00000221370 Efcab6Q6P1E8 1516 aa27.59■■■□□ 2.01
Trim9-208ENSMUST00000221370 Sart3Q9JLI8 962 aaKnown RBP27.59■■■□□ 2.01
Trim9-208ENSMUST00000221370 Depdc5P61460 1591 aa27.58■■■□□ 2.01
Trim9-208ENSMUST00000221370 Prex1Q69ZK0 1650 aa27.57■■■□□ 2
Trim9-208ENSMUST00000221370 Puf60Q3UEB3 564 aaKnown RBP27.56■■■□□ 2
Trim9-208ENSMUST00000221370 Tecpr2Q3UH45 1423 aa27.54■■■□□ 2
Trim9-208ENSMUST00000221370 IbtkQ6ZPR6 1352 aaKnown RBP27.53■■■□□ 2
Trim9-208ENSMUST00000221370 Hfm1D3Z4R1 1434 aa27.53■■■□□ 2
Trim9-208ENSMUST00000221370 Trim58Q5NCC9 485 aa27.52■■■□□ 2
Trim9-208ENSMUST00000221370 Ipo8Q7TMY7 1010 aa27.52■■■□□ 2
Trim9-208ENSMUST00000221370 Tspyl2Q7TQI8 677 aa27.52■■■□□ 2
Trim9-208ENSMUST00000221370 Ythdc2B2RR83 1445 aaKnown RBP27.52■■■□□ 2
Trim9-208ENSMUST00000221370 Adgrl3Q80TS3 1537 aa27.52■■■□□ 2
Trim9-208ENSMUST00000221370 Iqsec2Q5DU25 1478 aa27.52■■■□□ 2
Trim9-208ENSMUST00000221370 InsrP15208 1372 aa27.5■■□□□ 1.99
Trim9-208ENSMUST00000221370 DaxxO35613 739 aa27.5■■□□□ 1.99
Trim9-208ENSMUST00000221370 MaddQ80U28 1577 aa27.5■■□□□ 1.99
Trim9-208ENSMUST00000221370 Skint5A7XUY5 1461 aa27.5■■□□□ 1.99
Trim9-208ENSMUST00000221370 Fam135bQ9DAI6 1403 aa27.49■■□□□ 1.99
Trim9-208ENSMUST00000221370 Eif2ak4Q9QZ05 1648 aa27.49■■□□□ 1.99
Trim9-208ENSMUST00000221370 Ncbp3Q8BZR9 615 aaKnown RBP27.49■■□□□ 1.99
Trim9-208ENSMUST00000221370 Scaf11E9PZM7 1456 aaKnown RBP27.49■■□□□ 1.99
Trim9-208ENSMUST00000221370 Akap12Q9WTQ5 1684 aa27.48■■□□□ 1.99
Trim9-208ENSMUST00000221370 Irx3P81067 507 aa27.48■■□□□ 1.99
Trim9-208ENSMUST00000221370 GsdmaQ9EST1 446 aa27.48■■□□□ 1.99
Trim9-208ENSMUST00000221370 PalldQ9ET54 1408 aa27.46■■□□□ 1.99
Trim9-208ENSMUST00000221370 Ak7Q9D2H2 614 aa27.45■■□□□ 1.99
Trim9-208ENSMUST00000221370 Gas2l2Q5SSG4 860 aa27.45■■□□□ 1.98
Trim9-208ENSMUST00000221370 Pank1Q8K4K6 548 aa27.45■■□□□ 1.98
Trim9-208ENSMUST00000221370 Trim30dE9PWL0 497 aa27.44■■□□□ 1.98
Trim9-208ENSMUST00000221370 Adgrl1Q80TR1 1466 aa27.43■■□□□ 1.98
Trim9-208ENSMUST00000221370 Cald1E9QA15 768 aaKnown RBP27.43■■□□□ 1.98
Trim9-208ENSMUST00000221370 Ccdc183A2AJB1 534 aa27.43■■□□□ 1.98
Trim9-208ENSMUST00000221370 Plxnc1Q9QZC2 1574 aa27.42■■□□□ 1.98
Trim9-208ENSMUST00000221370 Cnga1P29974 684 aa27.41■■□□□ 1.98
Trim9-208ENSMUST00000221370 OvosQ3UU35 1456 aa27.41■■□□□ 1.98
Trim9-208ENSMUST00000221370 Ino80Q6ZPV2 1559 aa27.41■■□□□ 1.98
Trim9-208ENSMUST00000221370 Atp10aO54827 1508 aa27.4■■□□□ 1.98
Trim9-208ENSMUST00000221370 Gtf3c3Q3TMP1 882 aa27.4■■□□□ 1.98
Trim9-208ENSMUST00000221370 P2rx7Q9Z1M0 595 aa27.4■■□□□ 1.98
Trim9-208ENSMUST00000221370 Prdm2A2A7B5 1709 aaKnown RBP27.4■■□□□ 1.98
Trim9-208ENSMUST00000221370 Stag3O70576 1240 aa27.4■■□□□ 1.98
Trim9-208ENSMUST00000221370 4933416C03RikQ3V063 378 aa27.4■■□□□ 1.98
Trim9-208ENSMUST00000221370 Ppp1r9bQ6R891 817 aaKnown RBP27.39■■□□□ 1.98
Trim9-208ENSMUST00000221370 Ift172Q6VH22 1749 aa27.39■■□□□ 1.97
Trim9-208ENSMUST00000221370 Pdlim2Q8R1G6 349 aa27.38■■□□□ 1.97
Trim9-208ENSMUST00000221370 Duxf3A0A0N4SV92 674 aa27.38■■□□□ 1.97
Trim9-208ENSMUST00000221370 Hsp90ab1P11499 724 aaKnown RBP27.38■■□□□ 1.97
Trim9-208ENSMUST00000221370 Gli2Q0VGT2 1544 aa27.38■■□□□ 1.97
Trim9-208ENSMUST00000221370 Slc52a2Q9D8F3 450 aa27.38■■□□□ 1.97
Trim9-208ENSMUST00000221370 PtprtQ99M80 1454 aa27.37■■□□□ 1.97
Trim9-208ENSMUST00000221370 Lrrc7Q80TE7 1490 aa27.37■■□□□ 1.97
Trim9-208ENSMUST00000221370 Eif2s2Q99L45 331 aaKnown RBP27.36■■□□□ 1.97
Trim9-208ENSMUST00000221370 Med14A2ABV5 1459 aaKnown RBP27.36■■□□□ 1.97
Trim9-208ENSMUST00000221370 AU022751B1B0V2 589 aa27.36■■□□□ 1.97
Trim9-208ENSMUST00000221370 Atxn3Q9CVD2 355 aa27.35■■□□□ 1.97
Trim9-208ENSMUST00000221370 Rlbp1Q9Z275 317 aa27.35■■□□□ 1.97
Trim9-208ENSMUST00000221370 CenpjQ569L8 1344 aa27.34■■□□□ 1.97
Trim9-208ENSMUST00000221370 Cfap65Q3V0B4 1847 aa27.34■■□□□ 1.97
Trim9-208ENSMUST00000221370 IqubQ8CDK3 788 aa27.34■■□□□ 1.97
Trim9-208ENSMUST00000221370 Arid3cA6PWV5 409 aa27.33■■□□□ 1.97
Trim9-208ENSMUST00000221370 Hecw2Q6I6G8 1578 aa27.33■■□□□ 1.97
Trim9-208ENSMUST00000221370 Cdc42bpgQ80UW5 1551 aa27.32■■□□□ 1.96
Trim9-208ENSMUST00000221370 Prdm10Q3UTQ7 1184 aa27.31■■□□□ 1.96
Trim9-208ENSMUST00000221370 Ttc37F8VPK0 1563 aa27.31■■□□□ 1.96
Trim9-208ENSMUST00000221370 4930567H17RikQ3V0K5 233 aa27.31■■□□□ 1.96
Trim9-208ENSMUST00000221370 Nrxn1Q9CS84 1514 aa27.29■■□□□ 1.96
Trim9-208ENSMUST00000221370 Ppp2r3aB2RXC8 1150 aa27.29■■□□□ 1.96
Trim9-208ENSMUST00000221370 Mroh1E0CZ22 1640 aa27.28■■□□□ 1.96
Trim9-208ENSMUST00000221370 Ccar1Q8CH18 1146 aaKnown RBP27.28■■□□□ 1.96
Trim9-208ENSMUST00000221370 Atl3Q91YH5 541 aa27.28■■□□□ 1.96
Trim9-208ENSMUST00000221370 AglF8VPN4 1532 aa27.28■■□□□ 1.96
Trim9-208ENSMUST00000221370 Ksr2Q3UVC0 959 aa27.26■■□□□ 1.95
Trim9-208ENSMUST00000221370 Tsen2Q6P7W5 460 aa27.24■■□□□ 1.95
Trim9-208ENSMUST00000221370 U2af1Q9D883 239 aaKnown RBP27.23■■□□□ 1.95
Trim9-208ENSMUST00000221370 Apaf1O88879 1249 aa27.23■■□□□ 1.95
Trim9-208ENSMUST00000221370 Ciz1Q8VEH2 845 aa27.22■■□□□ 1.95
Trim9-208ENSMUST00000221370 Kiaa0556Q8C753 1610 aa27.22■■□□□ 1.95
Trim9-208ENSMUST00000221370 Htatsf1Q8BGC0 757 aa27.22■■□□□ 1.95
Trim9-208ENSMUST00000221370 Hs1bp3Q3TC93 395 aa27.19■■□□□ 1.94
Trim9-208ENSMUST00000221370 Ptch1Q61115 1434 aa27.19■■□□□ 1.94
Trim9-208ENSMUST00000221370 Polr3glQ8R0C0 218 aa27.18■■□□□ 1.94
Trim9-208ENSMUST00000221370 Znf541Q0GGX2 1363 aa27.17■■□□□ 1.94
Trim9-208ENSMUST00000221370 Sptbn5F6UCX4 1208 aa27.17■■□□□ 1.94
Trim9-208ENSMUST00000221370 KarsQ99MN1 595 aaKnown RBP27.17■■□□□ 1.94
Trim9-208ENSMUST00000221370 Tbc1d32Q3URV1 1296 aa27.16■■□□□ 1.94
Trim9-208ENSMUST00000221370 Adamts7Q68SA9 1657 aa27.16■■□□□ 1.94
Trim9-208ENSMUST00000221370 Knl1Q66JQ7 1612 aa27.16■■□□□ 1.94
Trim9-208ENSMUST00000221370 Dusp27Q148W8 1138 aa27.15■■□□□ 1.94
Trim9-208ENSMUST00000221370 Exosc9Q9JHI7 438 aaKnown RBP27.14■■□□□ 1.94
Trim9-208ENSMUST00000221370 Rabep1O35551 862 aa27.14■■□□□ 1.93
Trim9-208ENSMUST00000221370 Phlpp2Q8BXA7 1320 aa27.13■■□□□ 1.93
Trim9-208ENSMUST00000221370 Arhgap23Q69ZH9 1483 aa27.12■■□□□ 1.93
Trim9-208ENSMUST00000221370 Uhrf1bp1B2KF50 1429 aa27.11■■□□□ 1.93
Trim9-208ENSMUST00000221370 AdgbG3UZ78 1657 aa27.11■■□□□ 1.93
Trim9-208ENSMUST00000221370 Armcx1Q9CX83 456 aa27.1■■□□□ 1.93
Retrieved 100 of 22,080 RNA–protein pairs in 58.7 ms