RNA–Protein interactions for RNA: ENSMUST00000218866.1

Smc6-208, Transcript of Structural maintenance of chromosomes protein 6, mousemouse

TSL 1 (best) BASIC

Gene Smc6, Length 3,373 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc6-208ENSMUST00000218866 Rrbp1Q99PL5 1605 aaKnown RBP17.25■□□□□ 0.35
Smc6-208ENSMUST00000218866 Puf60Q3UEB3 564 aaKnown RBP17.24■□□□□ 0.35
Smc6-208ENSMUST00000218866 Tbc1d32Q3URV1 1296 aa17.23■□□□□ 0.35
Smc6-208ENSMUST00000218866 Antxr1Q9CZ52 562 aa17.23■□□□□ 0.35
Smc6-208ENSMUST00000218866 Paxip1Q6NZQ4 1056 aa17.23■□□□□ 0.35
Smc6-208ENSMUST00000218866 Clasp1Q80TV8 1535 aaKnown RBP17.23■□□□□ 0.35
Smc6-208ENSMUST00000218866 Nectin2P32507 530 aa17.22■□□□□ 0.35
Smc6-208ENSMUST00000218866 Ppip5k1A2ARP1 1436 aa17.22■□□□□ 0.35
Smc6-208ENSMUST00000218866 Nsd2Q8BVE8 1365 aa17.22■□□□□ 0.35
Smc6-208ENSMUST00000218866 AI481877A2ALV5 1481 aa17.22■□□□□ 0.35
Smc6-208ENSMUST00000218866 Abcc6Q9R1S7 1498 aa17.22■□□□□ 0.35
Smc6-208ENSMUST00000218866 Mcm4P49717 862 aa17.22■□□□□ 0.35
Smc6-208ENSMUST00000218866 Dusp27Q148W8 1138 aa17.21■□□□□ 0.35
Smc6-208ENSMUST00000218866 GorabQ8BRM2 368 aa17.21■□□□□ 0.35
Smc6-208ENSMUST00000218866 Zcchc11B2RX14 1644 aaKnown RBP17.21■□□□□ 0.35
Smc6-208ENSMUST00000218866 SlkO54988 1233 aa17.21■□□□□ 0.35
Smc6-208ENSMUST00000218866 Ccar1Q8CH18 1146 aaKnown RBP17.21■□□□□ 0.35
Smc6-208ENSMUST00000218866 Cog6Q8R3I3 657 aa17.21■□□□□ 0.35
Smc6-208ENSMUST00000218866 Map4k4P97820 1233 aaKnown RBP17.2■□□□□ 0.34
Smc6-208ENSMUST00000218866 Tmco5bQ80X59 307 aa17.2■□□□□ 0.34
Smc6-208ENSMUST00000218866 Nsfl1cQ9CZ44 370 aaKnown RBP17.2■□□□□ 0.34
Smc6-208ENSMUST00000218866 Stk26Q99JT2 416 aa17.2■□□□□ 0.34
Smc6-208ENSMUST00000218866 Zmym3Q9JLM4 1370 aa17.2■□□□□ 0.34
Smc6-208ENSMUST00000218866 Atp1b4Q99ME6 356 aa17.19■□□□□ 0.34
Smc6-208ENSMUST00000218866 Ccdc60Q8C4J0 545 aa17.19■□□□□ 0.34
Smc6-208ENSMUST00000218866 Arid3cA6PWV5 409 aa17.19■□□□□ 0.34
Smc6-208ENSMUST00000218866 Cald1E9QA15 768 aaKnown RBP17.19■□□□□ 0.34
Smc6-208ENSMUST00000218866 ErbinQ80TH2 1402 aa17.18■□□□□ 0.34
Smc6-208ENSMUST00000218866 Terf2O35144 541 aa17.18■□□□□ 0.34
Smc6-208ENSMUST00000218866 Kif18aQ91WD7 886 aa17.18■□□□□ 0.34
Smc6-208ENSMUST00000218866 Gtf2a1Q99PM3 378 aa17.18■□□□□ 0.34
Smc6-208ENSMUST00000218866 Gm14025A2AP89 1413 aa17.17■□□□□ 0.34
Smc6-208ENSMUST00000218866 Maco1Q7TQE6 664 aaKnown RBP17.17■□□□□ 0.34
Smc6-208ENSMUST00000218866 Ttc21bQ0HA38 1315 aa17.17■□□□□ 0.34
Smc6-208ENSMUST00000218866 Dmrtc1Q9D9R7 182 aa17.17■□□□□ 0.34
Smc6-208ENSMUST00000218866 Stk11ipQ3TAA7 1072 aa17.16■□□□□ 0.34
Smc6-208ENSMUST00000218866 Kif2cQ922S8 721 aa17.16■□□□□ 0.34
Smc6-208ENSMUST00000218866 Exosc9Q9JHI7 438 aaKnown RBP17.15■□□□□ 0.34
Smc6-208ENSMUST00000218866 Mast1Q9R1L5 1570 aa17.15■□□□□ 0.34
Smc6-208ENSMUST00000218866 Cep170Q6A065 1588 aa17.15■□□□□ 0.34
Smc6-208ENSMUST00000218866 Atl3Q91YH5 541 aa17.15■□□□□ 0.34
Smc6-208ENSMUST00000218866 Phf14Q9D4H9 881 aa17.14■□□□□ 0.33
Smc6-208ENSMUST00000218866 Tfip11Q9ERA6 838 aaKnown RBP17.14■□□□□ 0.33
Smc6-208ENSMUST00000218866 IbtkQ6ZPR6 1352 aaKnown RBP17.13■□□□□ 0.33
Smc6-208ENSMUST00000218866 Phlpp2Q8BXA7 1320 aa17.13■□□□□ 0.33
Smc6-208ENSMUST00000218866 Map7O88735 730 aa17.12■□□□□ 0.33
Smc6-208ENSMUST00000218866 Gm32742A0A1B0GT42 1604 aa17.12■□□□□ 0.33
Smc6-208ENSMUST00000218866 Stard8Q8K031 1019 aa17.11■□□□□ 0.33
Smc6-208ENSMUST00000218866 Pbrm1Q8BSQ9 1634 aaKnown RBP17.11■□□□□ 0.33
Smc6-208ENSMUST00000218866 Trim44Q9QXA7 346 aa17.09■□□□□ 0.33
Smc6-208ENSMUST00000218866 Usp54Q8BL06 1588 aaKnown RBP17.09■□□□□ 0.33
Smc6-208ENSMUST00000218866 Rbm25B2RY56 838 aaKnown RBP17.09■□□□□ 0.33
Smc6-208ENSMUST00000218866 IqubQ8CDK3 788 aa17.09■□□□□ 0.33
Smc6-208ENSMUST00000218866 Dnmt1P13864 1620 aaKnown RBP17.09■□□□□ 0.33
Smc6-208ENSMUST00000218866 G3bp1P97855 465 aaKnown RBP17.08■□□□□ 0.32
Smc6-208ENSMUST00000218866 Plin1Q8CGN5 517 aa17.08■□□□□ 0.32
Smc6-208ENSMUST00000218866 Fam135bQ9DAI6 1403 aa17.08■□□□□ 0.32
Smc6-208ENSMUST00000218866 Pola1P33609 1465 aa17.08■□□□□ 0.32
Smc6-208ENSMUST00000218866 AatkQ80YE4 1365 aa17.07■□□□□ 0.32
Smc6-208ENSMUST00000218866 SkilQ60665 675 aa17.07■□□□□ 0.32
Smc6-208ENSMUST00000218866 Fgd6Q69ZL1 1399 aa17.07■□□□□ 0.32
Smc6-208ENSMUST00000218866 CastP51125 788 aa17.07■□□□□ 0.32
Smc6-208ENSMUST00000218866 Q4VA45 678 aa17.07■□□□□ 0.32
Smc6-208ENSMUST00000218866 Kdm5aQ3UXZ9 1690 aa17.07■□□□□ 0.32
Smc6-208ENSMUST00000218866 Myo3aQ8K3H5 1613 aa17.06■□□□□ 0.32
Smc6-208ENSMUST00000218866 Rrp9Q91WM3 475 aaKnown RBP17.06■□□□□ 0.32
Smc6-208ENSMUST00000218866 Scaf11E9PZM7 1456 aaKnown RBP17.06■□□□□ 0.32
Smc6-208ENSMUST00000218866 Cdc42bpbQ7TT50 1713 aa17.06■□□□□ 0.32
Smc6-208ENSMUST00000218866 Lemd3Q9WU40 921 aa17.05■□□□□ 0.32
Smc6-208ENSMUST00000218866 Myom2Q14BI5 1463 aa17.05■□□□□ 0.32
Smc6-208ENSMUST00000218866 Atp10dQ8K2X1 1416 aa17.05■□□□□ 0.32
Smc6-208ENSMUST00000218866 Gprasp1Q5U4C1 1347 aa17.05■□□□□ 0.32
Smc6-208ENSMUST00000218866 Robo2Q7TPD3 1470 aa17.05■□□□□ 0.32
Smc6-208ENSMUST00000218866 Ddit3P35639 168 aa17.05■□□□□ 0.32
Smc6-208ENSMUST00000218866 KnstrnQ9D9Z1 312 aaKnown RBP17.04■□□□□ 0.32
Smc6-208ENSMUST00000218866 Nek4Q9Z1J2 792 aa17.04■□□□□ 0.32
Smc6-208ENSMUST00000218866 Ccdc146E9Q9F7 977 aa17.03■□□□□ 0.32
Smc6-208ENSMUST00000218866 AampJ3QN89 436 aa17.03■□□□□ 0.32
Smc6-208ENSMUST00000218866 Znf608Q56A10 1511 aa17.02■□□□□ 0.32
Smc6-208ENSMUST00000218866 4933402E13RikQ9D4D2 429 aa17.02■□□□□ 0.32
Smc6-208ENSMUST00000218866 Kif1bQ60575 1816 aaKnown RBP17.02■□□□□ 0.31
Smc6-208ENSMUST00000218866 Nphp4P59240 1425 aa17.02■□□□□ 0.31
Smc6-208ENSMUST00000218866 Rsph3aQ3UFY4 516 aa17.02■□□□□ 0.31
Smc6-208ENSMUST00000218866 Lrriq1Q0P5X1 1673 aa17.01■□□□□ 0.31
Smc6-208ENSMUST00000218866 ShprhQ7TPQ3 1674 aa17.01■□□□□ 0.31
Smc6-208ENSMUST00000218866 Kif20aP97329 887 aa17■□□□□ 0.31
Smc6-208ENSMUST00000218866 Brd1E9PZ26 1189 aaKnown RBP17■□□□□ 0.31
Smc6-208ENSMUST00000218866 DmtnQ9WV69 405 aa17■□□□□ 0.31
Smc6-208ENSMUST00000218866 AU022751B1B0V2 589 aa16.99■□□□□ 0.31
Smc6-208ENSMUST00000218866 U2surpQ6NV83 1029 aaKnown RBP16.99■□□□□ 0.31
Smc6-208ENSMUST00000218866 Erich6bQ9D4S6 220 aa16.99■□□□□ 0.31
Smc6-208ENSMUST00000218866 Cfap74Q3UY96 1578 aa16.99■□□□□ 0.31
Smc6-208ENSMUST00000218866 Rusc2Q80U22 1514 aa16.99■□□□□ 0.31
Smc6-208ENSMUST00000218866 Tbc1d9Q3UYK3 1264 aa16.98■□□□□ 0.31
Smc6-208ENSMUST00000218866 Chmp4cQ9D7F7 232 aa16.98■□□□□ 0.31
Smc6-208ENSMUST00000218866 Q3UPC7 1272 aa16.98■□□□□ 0.31
Smc6-208ENSMUST00000218866 Rnf17Q99MV7 1640 aa16.98■□□□□ 0.31
Smc6-208ENSMUST00000218866 Abcc1O35379 1528 aa16.97■□□□□ 0.31
Smc6-208ENSMUST00000218866 1700019A02RikA0A087WPV9 146 aa16.97■□□□□ 0.31
Smc6-208ENSMUST00000218866 Cavin4A2AMM0 362 aa16.97■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms