RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 SphkapQ6NSW3 1687 aa19.55■□□□□ 0.72
Upf1-202ENSMUST00000215817 Tom1O88746 492 aa19.54■□□□□ 0.72
Upf1-202ENSMUST00000215817 Fbln2P37889 1221 aa19.54■□□□□ 0.72
Upf1-202ENSMUST00000215817 Ccdc60Q8C4J0 545 aa19.54■□□□□ 0.72
Upf1-202ENSMUST00000215817 Ccar1Q8CH18 1146 aaKnown RBP19.54■□□□□ 0.72
Upf1-202ENSMUST00000215817 CatipB9EKE5 520 aa19.53■□□□□ 0.72
Upf1-202ENSMUST00000215817 AlkP97793 1621 aa19.52■□□□□ 0.72
Upf1-202ENSMUST00000215817 Rab3gap2Q8BMG7 1366 aa19.52■□□□□ 0.72
Upf1-202ENSMUST00000215817 Abcc6Q9R1S7 1498 aa19.51■□□□□ 0.71
Upf1-202ENSMUST00000215817 Trim30dE9PWL0 497 aa19.51■□□□□ 0.71
Upf1-202ENSMUST00000215817 Bcl2l13P59017 434 aa19.51■□□□□ 0.71
Upf1-202ENSMUST00000215817 Gsdma3Q5Y4Y6 464 aa19.51■□□□□ 0.71
Upf1-202ENSMUST00000215817 Sugp2Q8CH09 1067 aa19.51■□□□□ 0.71
Upf1-202ENSMUST00000215817 Cald1E9QA15 768 aaKnown RBP19.5■□□□□ 0.71
Upf1-202ENSMUST00000215817 Setd1bQ8CFT2 1985 aa19.49■□□□□ 0.71
Upf1-202ENSMUST00000215817 Rapgef3Q8VCC8 918 aa19.49■□□□□ 0.71
Upf1-202ENSMUST00000215817 Idi2Q8BFZ6 227 aa19.49■□□□□ 0.71
Upf1-202ENSMUST00000215817 Slc4a2P13808 1237 aaKnown RBP19.49■□□□□ 0.71
Upf1-202ENSMUST00000215817 Slc4a3P16283 1227 aa19.49■□□□□ 0.71
Upf1-202ENSMUST00000215817 Chd1P40201 1711 aa19.49■□□□□ 0.71
Upf1-202ENSMUST00000215817 Cluap1Q8R3P7 413 aa19.48■□□□□ 0.71
Upf1-202ENSMUST00000215817 Dixdc1Q80Y83 711 aa19.48■□□□□ 0.71
Upf1-202ENSMUST00000215817 HypkQ9CR41 129 aa19.48■□□□□ 0.71
Upf1-202ENSMUST00000215817 Slain2Q8CI08 581 aa19.47■□□□□ 0.71
Upf1-202ENSMUST00000215817 Usp16Q99LG0 825 aa19.47■□□□□ 0.71
Upf1-202ENSMUST00000215817 Chrna2Q91X60 512 aa19.47■□□□□ 0.71
Upf1-202ENSMUST00000215817 Cabp2Q9JLK4 216 aa19.47■□□□□ 0.71
Upf1-202ENSMUST00000215817 Ythdc1E9Q5K9 736 aaKnown RBP19.47■□□□□ 0.71
Upf1-202ENSMUST00000215817 B4galnt3Q6L8S8 986 aa19.46■□□□□ 0.71
Upf1-202ENSMUST00000215817 Fam50bQ9WTJ8 334 aa19.46■□□□□ 0.71
Upf1-202ENSMUST00000215817 Cc2d1aQ8K1A6 943 aa19.46■□□□□ 0.71
Upf1-202ENSMUST00000215817 Usp54Q8BL06 1588 aaKnown RBP19.46■□□□□ 0.71
Upf1-202ENSMUST00000215817 Gm21680A0A0G2JGR8 267 aa19.46■□□□□ 0.71
Upf1-202ENSMUST00000215817 Rab11fip3Q8CHD8 1047 aa19.46■□□□□ 0.71
Upf1-202ENSMUST00000215817 TkfcQ8VC30 578 aa19.46■□□□□ 0.71
Upf1-202ENSMUST00000215817 Naip7Q9JIB3 1402 aa19.46■□□□□ 0.71
Upf1-202ENSMUST00000215817 Mast1Q9R1L5 1570 aa19.45■□□□□ 0.7
Upf1-202ENSMUST00000215817 Ccdc27Q3V036 639 aa19.45■□□□□ 0.7
Upf1-202ENSMUST00000215817 Speer4bQ9D9F7 267 aa19.45■□□□□ 0.7
Upf1-202ENSMUST00000215817 PalmQ9Z0P4 383 aa19.45■□□□□ 0.7
Upf1-202ENSMUST00000215817 Swt1Q9DBQ9 907 aa19.45■□□□□ 0.7
Upf1-202ENSMUST00000215817 Irx3P81067 507 aa19.44■□□□□ 0.7
Upf1-202ENSMUST00000215817 Ccne1Q61457 408 aa19.44■□□□□ 0.7
Upf1-202ENSMUST00000215817 Ralbp1Q62172 648 aa19.44■□□□□ 0.7
Upf1-202ENSMUST00000215817 Ppm1fQ8CGA0 452 aa19.44■□□□□ 0.7
Upf1-202ENSMUST00000215817 NhsB1AV60 1647 aa19.44■□□□□ 0.7
Upf1-202ENSMUST00000215817 Skint5A7XUY5 1461 aa19.44■□□□□ 0.7
Upf1-202ENSMUST00000215817 Cdc42bpaQ3UU96 1719 aa19.44■□□□□ 0.7
Upf1-202ENSMUST00000215817 TimelessQ9R1X4 1197 aa19.44■□□□□ 0.7
Upf1-202ENSMUST00000215817 Chmp4bQ9D8B3 224 aaKnown RBP19.44■□□□□ 0.7
Upf1-202ENSMUST00000215817 Edc4Q3UJB9 1406 aaKnown RBP19.44■□□□□ 0.7
Upf1-202ENSMUST00000215817 IbtkQ6ZPR6 1352 aaKnown RBP19.43■□□□□ 0.7
Upf1-202ENSMUST00000215817 Ccdc30Q8BVF4 654 aa19.43■□□□□ 0.7
Upf1-202ENSMUST00000215817 Efcab6Q6P1E8 1516 aa19.43■□□□□ 0.7
Upf1-202ENSMUST00000215817 Supt6hQ62383 1726 aaKnown RBP19.41■□□□□ 0.7
Upf1-202ENSMUST00000215817 Dzip1Q8BMD2 852 aa19.41■□□□□ 0.7
Upf1-202ENSMUST00000215817 ZgpatQ8VDM1 511 aa19.41■□□□□ 0.7
Upf1-202ENSMUST00000215817 Kcnh5Q920E3 988 aa19.41■□□□□ 0.7
Upf1-202ENSMUST00000215817 G3bp1P97855 465 aaKnown RBP19.41■□□□□ 0.7
Upf1-202ENSMUST00000215817 Nos1Q9Z0J4 1429 aa19.41■□□□□ 0.7
Upf1-202ENSMUST00000215817 Nectin2P32507 530 aa19.41■□□□□ 0.7
Upf1-202ENSMUST00000215817 Nol10Q5RJG1 687 aaKnown RBP19.4■□□□□ 0.7
Upf1-202ENSMUST00000215817 AU022751B1B0V2 589 aa19.4■□□□□ 0.7
Upf1-202ENSMUST00000215817 Frmpd2A0A140LI67 1392 aa19.39■□□□□ 0.69
Upf1-202ENSMUST00000215817 Tmem132eQ6IEE6 982 aa19.39■□□□□ 0.69
Upf1-202ENSMUST00000215817 Mug2P28666 1451 aa19.39■□□□□ 0.69
Upf1-202ENSMUST00000215817 NinlQ6ZQ12 1394 aa19.38■□□□□ 0.69
Upf1-202ENSMUST00000215817 Chmp3Q9CQ10 224 aa19.38■□□□□ 0.69
Upf1-202ENSMUST00000215817 Abca8bQ8K440 1620 aa19.38■□□□□ 0.69
Upf1-202ENSMUST00000215817 Rnf17Q99MV7 1640 aa19.38■□□□□ 0.69
Upf1-202ENSMUST00000215817 Rbm25B2RY56 838 aaKnown RBP19.37■□□□□ 0.69
Upf1-202ENSMUST00000215817 Ddx17Q501J6 650 aaKnown RBP19.37■□□□□ 0.69
Upf1-202ENSMUST00000215817 Cavin4A2AMM0 362 aa19.37■□□□□ 0.69
Upf1-202ENSMUST00000215817 Kif1bQ60575 1816 aaKnown RBP19.36■□□□□ 0.69
Upf1-202ENSMUST00000215817 Gnai1B2RSH2 354 aa19.36■□□□□ 0.69
Upf1-202ENSMUST00000215817 Dusp27Q148W8 1138 aa19.36■□□□□ 0.69
Upf1-202ENSMUST00000215817 Gnai3Q9DC51 354 aa19.36■□□□□ 0.69
Upf1-202ENSMUST00000215817 Cdk13Q69ZA1 1511 aaKnown RBP19.36■□□□□ 0.69
Upf1-202ENSMUST00000215817 Ncoa1P70365 1447 aa19.36■□□□□ 0.69
Upf1-202ENSMUST00000215817 Gm21663A0A0G2JE01 267 aa19.36■□□□□ 0.69
Upf1-202ENSMUST00000215817 Gm7361D3Z6R1 267 aa19.36■□□□□ 0.69
Upf1-202ENSMUST00000215817 5031410I06RikE9Q4E0 267 aa19.36■□□□□ 0.69
Upf1-202ENSMUST00000215817 Gm1979E9QAN3 267 aa19.36■□□□□ 0.69
Upf1-202ENSMUST00000215817 Gm5862K7N5V5 267 aa19.36■□□□□ 0.69
Upf1-202ENSMUST00000215817 Gm10220K7N660 267 aa19.36■□□□□ 0.69
Upf1-202ENSMUST00000215817 Ggnbp2Q5SV77 696 aa19.36■□□□□ 0.69
Upf1-202ENSMUST00000215817 Eif4g2Q62448 906 aaKnown RBP19.36■□□□□ 0.69
Upf1-202ENSMUST00000215817 Slc12a5Q91V14 1138 aa19.35■□□□□ 0.69
Upf1-202ENSMUST00000215817 Plekhd1B2RPU2 505 aa19.34■□□□□ 0.69
Upf1-202ENSMUST00000215817 Sart3Q9JLI8 962 aaKnown RBP19.34■□□□□ 0.69
Upf1-202ENSMUST00000215817 TmpoQ61033 693 aaKnown RBP19.34■□□□□ 0.69
Upf1-202ENSMUST00000215817 PzpQ61838 1495 aa19.34■□□□□ 0.69
Upf1-202ENSMUST00000215817 Smg7Q5RJH6 1138 aaKnown RBP19.33■□□□□ 0.69
Upf1-202ENSMUST00000215817 Idi1P58044 227 aa19.33■□□□□ 0.69
Upf1-202ENSMUST00000215817 Zcchc11B2RX14 1644 aaKnown RBP19.33■□□□□ 0.68
Upf1-202ENSMUST00000215817 Fkbp4P30416 458 aa19.33■□□□□ 0.68
Upf1-202ENSMUST00000215817 Lrrc7Q80TE7 1490 aa19.32■□□□□ 0.68
Upf1-202ENSMUST00000215817 Mcm10Q0VBD2 885 aa19.32■□□□□ 0.68
Upf1-202ENSMUST00000215817 Lmod3E9QA62 571 aa19.32■□□□□ 0.68
Upf1-202ENSMUST00000215817 Nutm1Q8BHP2 1126 aa19.31■□□□□ 0.68
Retrieved 100 of 22,080 RNA–protein pairs in 86.7 ms