RNA–Protein interactions for RNA: ENSMUST00000206914.1

Rnf40-206, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-206ENSMUST00000206914 Abca17E9PX95 1733 aa13.75□□□□□ -0.21
Rnf40-206ENSMUST00000206914 Rrp9Q91WM3 475 aaKnown RBP13.74□□□□□ -0.21
Rnf40-206ENSMUST00000206914 Nphp4P59240 1425 aa13.74□□□□□ -0.21
Rnf40-206ENSMUST00000206914 Abcc1O35379 1528 aa13.74□□□□□ -0.21
Rnf40-206ENSMUST00000206914 Usp40Q8BWR4 1235 aa13.74□□□□□ -0.21
Rnf40-206ENSMUST00000206914 Srpk2O54781 681 aaKnown RBP13.73□□□□□ -0.21
Rnf40-206ENSMUST00000206914 KdrP35918 1367 aa13.73□□□□□ -0.21
Rnf40-206ENSMUST00000206914 Ncbp3Q8BZR9 615 aaKnown RBP13.73□□□□□ -0.21
Rnf40-206ENSMUST00000206914 Gas2l2Q5SSG4 860 aa13.72□□□□□ -0.21
Rnf40-206ENSMUST00000206914 Antxr1Q9CZ52 562 aa13.72□□□□□ -0.21
Rnf40-206ENSMUST00000206914 Map3k5O35099 1380 aa13.72□□□□□ -0.21
Rnf40-206ENSMUST00000206914 Hs1bp3Q3TC93 395 aa13.72□□□□□ -0.21
Rnf40-206ENSMUST00000206914 GsdmaQ9EST1 446 aa13.71□□□□□ -0.21
Rnf40-206ENSMUST00000206914 Myom1Q62234 1667 aaKnown RBP13.71□□□□□ -0.21
Rnf40-206ENSMUST00000206914 ArxO35085 564 aa13.71□□□□□ -0.21
Rnf40-206ENSMUST00000206914 Phlpp2Q8BXA7 1320 aa13.71□□□□□ -0.21
Rnf40-206ENSMUST00000206914 Talpid3E9PV87 1520 aa13.7□□□□□ -0.22
Rnf40-206ENSMUST00000206914 ErbinQ80TH2 1402 aa13.7□□□□□ -0.22
Rnf40-206ENSMUST00000206914 Fgd6Q69ZL1 1399 aa13.7□□□□□ -0.22
Rnf40-206ENSMUST00000206914 Iqsec2Q5DU25 1478 aa13.7□□□□□ -0.22
Rnf40-206ENSMUST00000206914 Map7O88735 730 aa13.69□□□□□ -0.22
Rnf40-206ENSMUST00000206914 Sall3Q62255 1320 aa13.69□□□□□ -0.22
Rnf40-206ENSMUST00000206914 Ccar1Q8CH18 1146 aaKnown RBP13.69□□□□□ -0.22
Rnf40-206ENSMUST00000206914 NhsB1AV60 1647 aa13.69□□□□□ -0.22
Rnf40-206ENSMUST00000206914 IbtkQ6ZPR6 1352 aaKnown RBP13.68□□□□□ -0.22
Rnf40-206ENSMUST00000206914 Armcx1Q9CX83 456 aa13.68□□□□□ -0.22
Rnf40-206ENSMUST00000206914 Isy1Q69ZQ2 285 aaKnown RBP13.67□□□□□ -0.22
Rnf40-206ENSMUST00000206914 Hfm1D3Z4R1 1434 aa13.67□□□□□ -0.22
Rnf40-206ENSMUST00000206914 Polr3glQ8R0C0 218 aa13.67□□□□□ -0.22
Rnf40-206ENSMUST00000206914 Mcm4P49717 862 aa13.67□□□□□ -0.22
Rnf40-206ENSMUST00000206914 Fan1Q69ZT1 1020 aa13.67□□□□□ -0.22
Rnf40-206ENSMUST00000206914 Rims1Q99NE5 1463 aa13.66□□□□□ -0.22
Rnf40-206ENSMUST00000206914 Myo5cE9Q1F5 1742 aa13.66□□□□□ -0.22
Rnf40-206ENSMUST00000206914 Ksr2Q3UVC0 959 aa13.66□□□□□ -0.22
Rnf40-206ENSMUST00000206914 Atxn3Q9CVD2 355 aa13.66□□□□□ -0.22
Rnf40-206ENSMUST00000206914 Myo3aQ8K3H5 1613 aa13.65□□□□□ -0.22
Rnf40-206ENSMUST00000206914 Abca8bQ8K440 1620 aa13.65□□□□□ -0.22
Rnf40-206ENSMUST00000206914 DnmbpQ6TXD4 1580 aa13.65□□□□□ -0.22
Rnf40-206ENSMUST00000206914 Ttc21bQ0HA38 1315 aa13.65□□□□□ -0.23
Rnf40-206ENSMUST00000206914 Cald1E9QA15 768 aaKnown RBP13.64□□□□□ -0.23
Rnf40-206ENSMUST00000206914 Scaf11E9PZM7 1456 aaKnown RBP13.64□□□□□ -0.23
Rnf40-206ENSMUST00000206914 Adgrl3Q80TS3 1537 aa13.64□□□□□ -0.23
Rnf40-206ENSMUST00000206914 Cdk5rap2Q8K389 1822 aa13.64□□□□□ -0.23
Rnf40-206ENSMUST00000206914 Spryd3E9Q9B3 442 aa13.64□□□□□ -0.23
Rnf40-206ENSMUST00000206914 Mfap1aC0HKD8 439 aaKnown RBP13.63□□□□□ -0.23
Rnf40-206ENSMUST00000206914 Mfap1bC0HKD9 439 aaKnown RBP13.63□□□□□ -0.23
Rnf40-206ENSMUST00000206914 Xrn1P97789 1719 aaKnown RBP13.63□□□□□ -0.23
Rnf40-206ENSMUST00000206914 Uggt1Q6P5E4 1551 aa13.63□□□□□ -0.23
Rnf40-206ENSMUST00000206914 Terf2O35144 541 aa13.63□□□□□ -0.23
Rnf40-206ENSMUST00000206914 Kidins220E9Q9B7 1793 aa13.63□□□□□ -0.23
Rnf40-206ENSMUST00000206914 Catsper2A2ARP9 588 aa13.62□□□□□ -0.23
Rnf40-206ENSMUST00000206914 Ssh1Q76I79 1042 aa13.62□□□□□ -0.23
Rnf40-206ENSMUST00000206914 Stk24Q99KH8 431 aa13.62□□□□□ -0.23
Rnf40-206ENSMUST00000206914 Iqgap3F8VQ29 1632 aa13.62□□□□□ -0.23
Rnf40-206ENSMUST00000206914 Zfyve16Q80U44 1528 aa13.62□□□□□ -0.23
Rnf40-206ENSMUST00000206914 Eif2ak4Q9QZ05 1648 aa13.61□□□□□ -0.23
Rnf40-206ENSMUST00000206914 Atp10dQ8K2X1 1416 aa13.61□□□□□ -0.23
Rnf40-206ENSMUST00000206914 Kif3bQ61771 747 aa13.61□□□□□ -0.23
Rnf40-206ENSMUST00000206914 Ciz1Q8VEH2 845 aa13.61□□□□□ -0.23
Rnf40-206ENSMUST00000206914 Abca8aQ8K442 1620 aa13.61□□□□□ -0.23
Rnf40-206ENSMUST00000206914 Puf60Q3UEB3 564 aaKnown RBP13.6□□□□□ -0.23
Rnf40-206ENSMUST00000206914 InsrP15208 1372 aa13.6□□□□□ -0.23
Rnf40-206ENSMUST00000206914 Cnga1P29974 684 aa13.6□□□□□ -0.23
Rnf40-206ENSMUST00000206914 Prdm10Q3UTQ7 1184 aa13.6□□□□□ -0.23
Rnf40-206ENSMUST00000206914 KnstrnQ9D9Z1 312 aaKnown RBP13.6□□□□□ -0.23
Rnf40-206ENSMUST00000206914 AatkQ80YE4 1365 aa13.59□□□□□ -0.23
Rnf40-206ENSMUST00000206914 Adgrl1Q80TR1 1466 aa13.59□□□□□ -0.23
Rnf40-206ENSMUST00000206914 Cluap1Q8R3P7 413 aa13.59□□□□□ -0.23
Rnf40-206ENSMUST00000206914 U2af1Q9D883 239 aaKnown RBP13.59□□□□□ -0.23
Rnf40-206ENSMUST00000206914 P2rx7Q9Z1M0 595 aa13.59□□□□□ -0.23
Rnf40-206ENSMUST00000206914 Sipa1l1Q8C0T5 1782 aa13.59□□□□□ -0.23
Rnf40-206ENSMUST00000206914 Tmem131lQ3U3D7 1597 aa13.59□□□□□ -0.23
Rnf40-206ENSMUST00000206914 Trim26Q99PN3 545 aa13.59□□□□□ -0.23
Rnf40-206ENSMUST00000206914 Efcab6Q6P1E8 1516 aa13.58□□□□□ -0.23
Rnf40-206ENSMUST00000206914 Rrp12Q6P5B0 1295 aaKnown RBP13.58□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Tsen2Q6P7W5 460 aa13.58□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Fndc1E9Q043 1732 aa13.58□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Plcb2A3KGF7 1181 aa13.57□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Rsph3aQ3UFY4 516 aa13.57□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Kif2cQ922S8 721 aa13.57□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Skint5A7XUY5 1461 aa13.57□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Rbm25B2RY56 838 aaKnown RBP13.57□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Apaf1O88879 1249 aa13.57□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Ncapd2Q8K2Z4 1392 aa13.57□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Pnmal2G3X9N3 661 aa13.57□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Kif18aQ91WD7 886 aa13.57□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Nos1Q9Z0J4 1429 aa13.57□□□□□ -0.24
Rnf40-206ENSMUST00000206914 SkilQ60665 675 aa13.56□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Plxnc1Q9QZC2 1574 aa13.56□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Med14A2ABV5 1459 aaKnown RBP13.56□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Ttc37F8VPK0 1563 aa13.56□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Stag3O70576 1240 aa13.56□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Cfap65Q3V0B4 1847 aa13.56□□□□□ -0.24
Rnf40-206ENSMUST00000206914 MaddQ80U28 1577 aa13.56□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Gm10093D3YYI8 482 aa13.55□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Hdac1O09106 482 aaKnown RBP13.55□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Adgrb3Q80ZF8 1522 aa13.55□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Trpm1Q2TV84 1622 aa13.55□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Hecw2Q6I6G8 1578 aa13.55□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Znf518aB2RRF6 1478 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms