RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Puf60Q3UEB3 564 aaKnown RBP11.25□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Soga1E1U8D0 1418 aa11.24□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Ric3Q8BPM6 367 aa11.24□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Plcd3Q8K2J0 785 aa11.24□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Ncoa1P70365 1447 aa11.24□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Tpm3-rs7D3Z2H9 248 aa11.24□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Tpd52l1O54818 204 aa11.23□□□□□ -0.61
Scn8a-213ENSMUST00000201549 St18Q80TY4 1045 aa11.23□□□□□ -0.61
Scn8a-213ENSMUST00000201549 RdxP26043 583 aaKnown RBP11.23□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Liat1Q810M6 228 aa11.23□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Themis2Q91YX0 663 aa11.23□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Atp6v1dP57746 247 aa11.23□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Sytl4Q9R0Q1 673 aa11.23□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Naip5Q9R016 1403 aa11.23□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Sf3a1Q8K4Z5 791 aaKnown RBP11.22□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Ccdc43Q9CR29 222 aaKnown RBP11.22□□□□□ -0.61
Scn8a-213ENSMUST00000201549 PrxO55103 1391 aa11.22□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Trim30aP15533 496 aa11.22□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Krt82Q99M74 516 aa11.22□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Utp3Q9JI13 469 aaKnown RBP11.22□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Nol12Q8BG17 217 aa11.22□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Cabp4Q8VHC5 271 aa11.22□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Abcc5Q9R1X5 1436 aa11.22□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Gm973E9Q295 1059 aa11.21□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Kdm4aQ8BW72 1064 aa11.21□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Lamc3Q9R0B6 1581 aa11.21□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Nsd2Q8BVE8 1365 aa11.21□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Polr3gQ6NXY9 223 aa11.21□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Cdca7Q9D0M2 382 aa11.21□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Znf692Q3U381 531 aa11.21□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Q9D2X8 372 aa11.21□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Swt1Q9DBQ9 907 aa11.21□□□□□ -0.62
Scn8a-213ENSMUST00000201549 SynmQ70IV5 1561 aa11.21□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Calcoco2A2A6M5 331 aa11.21□□□□□ -0.62
Scn8a-213ENSMUST00000201549 SkilQ60665 675 aa11.21□□□□□ -0.62
Scn8a-213ENSMUST00000201549 PogkQ80TC5 607 aa11.21□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Il16O54824 1322 aa11.2□□□□□ -0.62
Scn8a-213ENSMUST00000201549 SrrtQ99MR6 875 aaKnown RBP11.2□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Ccdc141E9Q8Q6 1531 aa11.2□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Gsto1O09131 240 aa11.2□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Pdcl3Q8BVF2 240 aa11.2□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Pde3bQ61409 1100 aa11.2□□□□□ -0.62
Scn8a-213ENSMUST00000201549 MycnP03966 462 aaKnown RBP11.2□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Cnksr2Q80YA9 1032 aa11.2□□□□□ -0.62
Scn8a-213ENSMUST00000201549 CadpsQ80TJ1 1355 aa11.2□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Pus7B7ZNL8 666 aaKnown RBP11.19□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Hmox1P14901 289 aa11.19□□□□□ -0.62
Scn8a-213ENSMUST00000201549 3425401B19RikD3Z1D3 1412 aa11.19□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Rnf214Q8BFU3 668 aaKnown RBP11.19□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Cog6Q8R3I3 657 aa11.19□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Wdr62Q3U3T8 1523 aa11.19□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Fam43aQ8BUP8 424 aa11.19□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Gripap1Q8VD04 806 aa11.19□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Crocc2F6XLV1 1638 aa11.18□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Kif4P33174 1231 aa11.18□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Pip4k2bQ80XI4 416 aa11.17□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Egfem1Q8C088 590 aa11.17□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Skida1Q80YR3 822 aa11.17□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Mug1P28665 1476 aa11.17□□□□□ -0.62
Scn8a-213ENSMUST00000201549 AampJ3QN89 436 aa11.17□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Atxn3Q9CVD2 355 aa11.17□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Dhx16G3X8X0 1044 aaKnown RBP11.16□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Tpm3P21107 285 aaKnown RBP11.16□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Gnai1B2RSH2 354 aa11.16□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Sptbn5F6UCX4 1208 aa11.16□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Gnai3Q9DC51 354 aa11.16□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Asxl1P59598 1514 aa11.16□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Ccer1Q9CQL2 403 aa11.16□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Tceal9Q9DD24 104 aa11.16□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Scaf1Q5U4C3 1256 aaKnown RBP11.16□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Kif18aQ91WD7 886 aa11.16□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Dusp27Q148W8 1138 aa11.16□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Rprd2Q6NXI6 1469 aaKnown RBP11.16□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Q9D9H8 365 aa11.16□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Ap3b2Q9JME5 1082 aa11.16□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Nap1l3Q794H2 544 aa11.15□□□□□ -0.62
Scn8a-213ENSMUST00000201549 KinQ8K339 391 aa11.15□□□□□ -0.62
Scn8a-213ENSMUST00000201549 Prdm16A2A935 1275 aa11.14□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Cetn4Q8K4K1 168 aa11.14□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Rbm10Q99KG3 930 aaKnown RBP11.14□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Ssh1Q76I79 1042 aa11.14□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Mad1l1Q9WTX8 717 aaKnown RBP11.14□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Thoc2B1AZI6 1594 aaKnown RBP11.14□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Cspp1B2RX88 1205 aa11.14□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Atp2b2Q9R0K7 1198 aa11.14□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Gm21190A0A0G2JGJ6 266 aa11.14□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Cavin4A2AMM0 362 aa11.14□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Stk3Q9JI10 497 aa11.14□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Cyp46a1Q9WVK8 500 aa11.14□□□□□ -0.63
Scn8a-213ENSMUST00000201549 ArsiQ32KI9 573 aa11.13□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Sall3Q62255 1320 aa11.13□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Sv2bQ8BG39 683 aa11.13□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Eif4g1Q6NZJ6 1600 aaKnown RBP11.13□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Babam1Q3UI43 333 aa11.13□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Sh3bgrQ9WUZ7 214 aa11.13□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Cabp2Q9JLK4 216 aa11.12□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Usp48Q3V0C5 1052 aa11.12□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Glipr1l2Q9CQ35 332 aa11.12□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Paxip1Q6NZQ4 1056 aa11.12□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Fam13bQ8K2H3 851 aa11.12□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms