RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 HypkQ9CR41 129 aa17.1■□□□□ 0.33
Pcdha1-202ENSMUST00000193839 Ssh2Q5SW75 1423 aa17.1■□□□□ 0.33
Pcdha1-202ENSMUST00000193839 Cald1E9QA15 768 aaKnown RBP17.1■□□□□ 0.33
Pcdha1-202ENSMUST00000193839 Zfp444Q3TDV8 331 aaKnown RBP17.1■□□□□ 0.33
Pcdha1-202ENSMUST00000193839 VgfQ0VGU4 617 aa17.09■□□□□ 0.33
Pcdha1-202ENSMUST00000193839 Pip4k2bQ80XI4 416 aa17.09■□□□□ 0.33
Pcdha1-202ENSMUST00000193839 Pdcl3Q8BVF2 240 aa17.09■□□□□ 0.33
Pcdha1-202ENSMUST00000193839 Sirt1Q923E4 737 aa17.09■□□□□ 0.33
Pcdha1-202ENSMUST00000193839 Mfap1aC0HKD8 439 aaKnown RBP17.09■□□□□ 0.33
Pcdha1-202ENSMUST00000193839 Mfap1bC0HKD9 439 aaKnown RBP17.09■□□□□ 0.33
Pcdha1-202ENSMUST00000193839 Kdm3bQ6ZPY7 1562 aa17.09■□□□□ 0.33
Pcdha1-202ENSMUST00000193839 Lmo7E9PYF4 1699 aaKnown RBP17.09■□□□□ 0.33
Pcdha1-202ENSMUST00000193839 Fmnl2A2APV2 1086 aa17.08■□□□□ 0.32
Pcdha1-202ENSMUST00000193839 Fchsd2Q3USJ8 740 aa17.08■□□□□ 0.32
Pcdha1-202ENSMUST00000193839 Rrbp1Q99PL5 1605 aaKnown RBP17.08■□□□□ 0.32
Pcdha1-202ENSMUST00000193839 Becn1O88597 448 aa17.08■□□□□ 0.32
Pcdha1-202ENSMUST00000193839 MecomP14404 1042 aa17.07■□□□□ 0.32
Pcdha1-202ENSMUST00000193839 Rassf8Q8CJ96 419 aa17.07■□□□□ 0.32
Pcdha1-202ENSMUST00000193839 Smc4Q8CG47 1286 aa17.07■□□□□ 0.32
Pcdha1-202ENSMUST00000193839 Rsph3aQ3UFY4 516 aa17.06■□□□□ 0.32
Pcdha1-202ENSMUST00000193839 Dennd6aQ8BH65 605 aa17.06■□□□□ 0.32
Pcdha1-202ENSMUST00000193839 Arhgef40Q3UPH7 1517 aa17.06■□□□□ 0.32
Pcdha1-202ENSMUST00000193839 Chmp3Q9CQ10 224 aa17.06■□□□□ 0.32
Pcdha1-202ENSMUST00000193839 Pknox2Q8BG99 474 aa17.06■□□□□ 0.32
Pcdha1-202ENSMUST00000193839 Q8BT18 775 aa17.06■□□□□ 0.32
Pcdha1-202ENSMUST00000193839 Evi5lH3BKQ3 813 aa17.06■□□□□ 0.32
Pcdha1-202ENSMUST00000193839 Atl3Q91YH5 541 aa17.06■□□□□ 0.32
Pcdha1-202ENSMUST00000193839 Lrriq1Q0P5X1 1673 aa17.05■□□□□ 0.32
Pcdha1-202ENSMUST00000193839 Calcoco2A2A6M5 331 aa17.05■□□□□ 0.32
Pcdha1-202ENSMUST00000193839 Glipr1l2Q9CQ35 332 aa17.05■□□□□ 0.32
Pcdha1-202ENSMUST00000193839 Q3UJC8 639 aa17.04■□□□□ 0.32
Pcdha1-202ENSMUST00000193839 Ric3Q8BPM6 367 aa17.04■□□□□ 0.32
Pcdha1-202ENSMUST00000193839 Ush1cQ9ES64 910 aa17.04■□□□□ 0.32
Pcdha1-202ENSMUST00000193839 RalgapbQ8BQZ4 1484 aa17.04■□□□□ 0.32
Pcdha1-202ENSMUST00000193839 Slc4a10Q5DTL9 1118 aa17.04■□□□□ 0.32
Pcdha1-202ENSMUST00000193839 Ccdc146E9Q9F7 977 aa17.03■□□□□ 0.32
Pcdha1-202ENSMUST00000193839 Apaf1O88879 1249 aa17.03■□□□□ 0.32
Pcdha1-202ENSMUST00000193839 Adgrb2Q8CGM1 1561 aa17.03■□□□□ 0.32
Pcdha1-202ENSMUST00000193839 Gm10471E9Q1C7 252 aa17.02■□□□□ 0.32
Pcdha1-202ENSMUST00000193839 Smarce1O54941 411 aaKnown RBP17.02■□□□□ 0.32
Pcdha1-202ENSMUST00000193839 Atp6v1dP57746 247 aa17.02■□□□□ 0.32
Pcdha1-202ENSMUST00000193839 Tceal9Q9DD24 104 aa17.02■□□□□ 0.31
Pcdha1-202ENSMUST00000193839 PrkcshO08795 521 aa17.01■□□□□ 0.31
Pcdha1-202ENSMUST00000193839 Gprasp1Q5U4C1 1347 aa17.01■□□□□ 0.31
Pcdha1-202ENSMUST00000193839 Brpf1B2RRD7 1212 aa17.01■□□□□ 0.31
Pcdha1-202ENSMUST00000193839 Zpr1Q62384 459 aa17.01■□□□□ 0.31
Pcdha1-202ENSMUST00000193839 Bcl11bQ99PV8 884 aa17■□□□□ 0.31
Pcdha1-202ENSMUST00000193839 Eif4g3Q80XI3 1579 aaKnown RBP17■□□□□ 0.31
Pcdha1-202ENSMUST00000193839 Lrrc9Q8CDN9 1456 aa16.99■□□□□ 0.31
Pcdha1-202ENSMUST00000193839 RdxP26043 583 aaKnown RBP16.99■□□□□ 0.31
Pcdha1-202ENSMUST00000193839 Arhgef11Q68FM7 1552 aa16.99■□□□□ 0.31
Pcdha1-202ENSMUST00000193839 MpripP97434 1024 aa16.99■□□□□ 0.31
Pcdha1-202ENSMUST00000193839 Dusp27Q148W8 1138 aa16.99■□□□□ 0.31
Pcdha1-202ENSMUST00000193839 Sv2bQ8BG39 683 aa16.99■□□□□ 0.31
Pcdha1-202ENSMUST00000193839 GorabQ8BRM2 368 aa16.99■□□□□ 0.31
Pcdha1-202ENSMUST00000193839 PtprgQ05909 1442 aa16.99■□□□□ 0.31
Pcdha1-202ENSMUST00000193839 Triml2E9PW10 424 aa16.98■□□□□ 0.31
Pcdha1-202ENSMUST00000193839 Pank1Q8K4K6 548 aa16.98■□□□□ 0.31
Pcdha1-202ENSMUST00000193839 Gcc2Q8CHG3 1679 aa16.98■□□□□ 0.31
Pcdha1-202ENSMUST00000193839 PnnO35691 725 aaKnown RBP16.98■□□□□ 0.31
Pcdha1-202ENSMUST00000193839 Map4k4P97820 1233 aaKnown RBP16.98■□□□□ 0.31
Pcdha1-202ENSMUST00000193839 TkfcQ8VC30 578 aa16.98■□□□□ 0.31
Pcdha1-202ENSMUST00000193839 Abcc2Q8VI47 1543 aa16.97■□□□□ 0.31
Pcdha1-202ENSMUST00000193839 Unc13aQ4KUS2 1712 aa16.97■□□□□ 0.31
Pcdha1-202ENSMUST00000193839 Cspp1B2RX88 1205 aa16.97■□□□□ 0.31
Pcdha1-202ENSMUST00000193839 Zranb3Q6NZP1 1069 aa16.97■□□□□ 0.31
Pcdha1-202ENSMUST00000193839 Cetn4Q8K4K1 168 aa16.97■□□□□ 0.31
Pcdha1-202ENSMUST00000193839 Cpsf1Q9EPU4 1441 aaKnown RBP16.97■□□□□ 0.31
Pcdha1-202ENSMUST00000193839 Supt6hQ62383 1726 aaKnown RBP16.96■□□□□ 0.31
Pcdha1-202ENSMUST00000193839 Talpid3E9PV87 1520 aa16.96■□□□□ 0.31
Pcdha1-202ENSMUST00000193839 Ppp1r15aP17564 657 aa16.96■□□□□ 0.31
Pcdha1-202ENSMUST00000193839 Iffo2Q8R2V2 512 aa16.95■□□□□ 0.3
Pcdha1-202ENSMUST00000193839 Dennd4bQ3U1Y4 1499 aa16.95■□□□□ 0.3
Pcdha1-202ENSMUST00000193839 Idi2Q8BFZ6 227 aa16.95■□□□□ 0.3
Pcdha1-202ENSMUST00000193839 PsapQ61207 557 aaKnown RBP16.94■□□□□ 0.3
Pcdha1-202ENSMUST00000193839 PalmQ9Z0P4 383 aa16.94■□□□□ 0.3
Pcdha1-202ENSMUST00000193839 Gm21698A0A087WQP8 267 aa16.94■□□□□ 0.3
Pcdha1-202ENSMUST00000193839 Gm21671G3UY31 267 aa16.94■□□□□ 0.3
Pcdha1-202ENSMUST00000193839 Rabep1O35551 862 aa16.94■□□□□ 0.3
Pcdha1-202ENSMUST00000193839 SlkO54988 1233 aa16.94■□□□□ 0.3
Pcdha1-202ENSMUST00000193839 Rrp9Q91WM3 475 aaKnown RBP16.94■□□□□ 0.3
Pcdha1-202ENSMUST00000193839 Fmn2Q9JL04 1578 aa16.94■□□□□ 0.3
Pcdha1-202ENSMUST00000193839 Isy1Q69ZQ2 285 aaKnown RBP16.94■□□□□ 0.3
Pcdha1-202ENSMUST00000193839 Plekhd1B2RPU2 505 aa16.93■□□□□ 0.3
Pcdha1-202ENSMUST00000193839 Cc2d1aQ8K1A6 943 aa16.93■□□□□ 0.3
Pcdha1-202ENSMUST00000193839 Kcnh5Q920E3 988 aa16.93■□□□□ 0.3
Pcdha1-202ENSMUST00000193839 Map3k4O08648 1597 aa16.93■□□□□ 0.3
Pcdha1-202ENSMUST00000193839 ZgpatQ8VDM1 511 aa16.93■□□□□ 0.3
Pcdha1-202ENSMUST00000193839 Nectin2P32507 530 aa16.93■□□□□ 0.3
Pcdha1-202ENSMUST00000193839 Cabp2Q9JLK4 216 aa16.92■□□□□ 0.3
Pcdha1-202ENSMUST00000193839 Gnl3lQ6PGG6 577 aaKnown RBP16.92■□□□□ 0.3
Pcdha1-202ENSMUST00000193839 Clstn1Q9EPL2 979 aa16.92■□□□□ 0.3
Pcdha1-202ENSMUST00000193839 Gli2Q0VGT2 1544 aa16.92■□□□□ 0.3
Pcdha1-202ENSMUST00000193839 InsrP15208 1372 aa16.91■□□□□ 0.3
Pcdha1-202ENSMUST00000193839 Ak7Q9D2H2 614 aa16.91■□□□□ 0.3
Pcdha1-202ENSMUST00000193839 Gm10563F6WIE4 79 aa16.91■□□□□ 0.3
Pcdha1-202ENSMUST00000193839 Map7d2A2AG50 781 aa16.91■□□□□ 0.3
Pcdha1-202ENSMUST00000193839 Sos1Q62245 1319 aa16.9■□□□□ 0.3
Pcdha1-202ENSMUST00000193839 Cfdp1O88271 295 aaKnown RBP16.9■□□□□ 0.3
Pcdha1-202ENSMUST00000193839 AppP12023 770 aa16.9■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 77 ms