RNA–Protein interactions for RNA: ENSMUST00000189554.1

Gm28772-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28772, Length 2,165 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28772-201ENSMUST00000189554 PtmaP26350 111 aa9.63□□□□□ -0.87
Gm28772-201ENSMUST00000189554 U2af2P26369 475 aaKnown RBP9.63□□□□□ -0.87
Gm28772-201ENSMUST00000189554 E2f4Q8R0K9 410 aa9.63□□□□□ -0.87
Gm28772-201ENSMUST00000189554 Urb2E9Q7L1 1524 aaKnown RBP9.63□□□□□ -0.87
Gm28772-201ENSMUST00000189554 Zfp597E9Q6S0 419 aa9.63□□□□□ -0.87
Gm28772-201ENSMUST00000189554 ImpactO55091 318 aa9.63□□□□□ -0.87
Gm28772-201ENSMUST00000189554 Ptgs1P22437 602 aa9.63□□□□□ -0.87
Gm28772-201ENSMUST00000189554 Ercc3P49135 783 aa9.63□□□□□ -0.87
Gm28772-201ENSMUST00000189554 Prm3Q62100 101 aa9.63□□□□□ -0.87
Gm28772-201ENSMUST00000189554 Cdca7Q9D0M2 382 aa9.63□□□□□ -0.87
Gm28772-201ENSMUST00000189554 3425401B19RikD3Z1D3 1412 aa9.62□□□□□ -0.87
Gm28772-201ENSMUST00000189554 Zcchc11B2RX14 1644 aaKnown RBP9.62□□□□□ -0.87
Gm28772-201ENSMUST00000189554 Erich3F6QRE9 1637 aa9.62□□□□□ -0.87
Gm28772-201ENSMUST00000189554 Kif2aP28740 705 aa9.62□□□□□ -0.87
Gm28772-201ENSMUST00000189554 Iqca1Q9CUL5 857 aa9.62□□□□□ -0.87
Gm28772-201ENSMUST00000189554 Swt1Q9DBQ9 907 aa9.62□□□□□ -0.87
Gm28772-201ENSMUST00000189554 PtprkP35822 1457 aa9.62□□□□□ -0.87
Gm28772-201ENSMUST00000189554 NrkQ9R0G8 1455 aa9.62□□□□□ -0.87
Gm28772-201ENSMUST00000189554 Ylpm1Q9R0I7 1386 aaKnown RBP9.62□□□□□ -0.87
Gm28772-201ENSMUST00000189554 Mkrn3Q60764 544 aa9.61□□□□□ -0.87
Gm28772-201ENSMUST00000189554 CtifQ6PEE2 600 aaKnown RBP9.61□□□□□ -0.87
Gm28772-201ENSMUST00000189554 Sass6Q80UK7 654 aa9.61□□□□□ -0.87
Gm28772-201ENSMUST00000189554 BlmO88700 1416 aa9.61□□□□□ -0.87
Gm28772-201ENSMUST00000189554 Kcng1A2BDX4 514 aa9.61□□□□□ -0.87
Gm28772-201ENSMUST00000189554 Lrriq3Q14DL3 633 aa9.61□□□□□ -0.87
Gm28772-201ENSMUST00000189554 Tmed8Q3UHI4 326 aa9.61□□□□□ -0.87
Gm28772-201ENSMUST00000189554 Plb1Q3TTY0 1478 aa9.61□□□□□ -0.87
Gm28772-201ENSMUST00000189554 Ccdc34Q3UI66 367 aa9.6□□□□□ -0.87
Gm28772-201ENSMUST00000189554 Kdm4aQ8BW72 1064 aa9.6□□□□□ -0.87
Gm28772-201ENSMUST00000189554 Ulbp1Q8HWA3 334 aa9.6□□□□□ -0.87
Gm28772-201ENSMUST00000189554 Ddx41Q91VN6 622 aaKnown RBP9.6□□□□□ -0.87
Gm28772-201ENSMUST00000189554 Pcdhgc5Q91XW9 944 aa9.6□□□□□ -0.87
Gm28772-201ENSMUST00000189554 PogzQ8BZH4 1409 aaKnown RBP9.6□□□□□ -0.87
Gm28772-201ENSMUST00000189554 Shroom4Q1W617 1475 aa9.6□□□□□ -0.87
Gm28772-201ENSMUST00000189554 Ccdc173A0JLY1 547 aa9.6□□□□□ -0.87
Gm28772-201ENSMUST00000189554 Zscan25B2RX31 543 aa9.6□□□□□ -0.87
Gm28772-201ENSMUST00000189554 Znf771Q8BJ90 317 aa9.6□□□□□ -0.87
Gm28772-201ENSMUST00000189554 Phf20l1Q8CCJ9 1013 aa9.6□□□□□ -0.87
Gm28772-201ENSMUST00000189554 Rcan3Q9JKK0 239 aa9.6□□□□□ -0.87
Gm28772-201ENSMUST00000189554 Ripply1Q2WG77 201 aa9.59□□□□□ -0.87
Gm28772-201ENSMUST00000189554 Irx5Q9JKQ4 484 aa9.59□□□□□ -0.87
Gm28772-201ENSMUST00000189554 Cux1P53564 1515 aa9.59□□□□□ -0.87
Gm28772-201ENSMUST00000189554 4931400O07RikQ9D4M5 137 aa9.58□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Zkscan5Q9Z1D8 819 aa9.58□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Rbm42Q91V81 474 aaKnown RBP9.58□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Anapc4Q91W96 807 aa9.58□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Ttc21aQ8C0S4 1314 aa9.58□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Gm1043A0A140LJC2 1431 aa9.58□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Duox2A2AQ99 1517 aa9.58□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Il16O54824 1322 aa9.57□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Rprd2Q6NXI6 1469 aaKnown RBP9.57□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Cavin1O54724 392 aa9.57□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Kiaa0754Q69ZZ9 979 aa9.57□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Rassf4Q8CB96 322 aa9.56□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Rpgrip1lQ8CG73 1264 aa9.56□□□□□ -0.88
Gm28772-201ENSMUST00000189554 KarsQ99MN1 595 aaKnown RBP9.56□□□□□ -0.88
Gm28772-201ENSMUST00000189554 MycbpQ9EQS3 103 aa9.56□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Ift140E9PY46 1464 aa9.56□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Dennd4bQ3U1Y4 1499 aa9.56□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Trim30aP15533 496 aa9.56□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Sf3a1Q8K4Z5 791 aaKnown RBP9.56□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Kif2cQ922S8 721 aa9.56□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Cep83Q9D5R3 692 aa9.56□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Naip6Q9JIB6 1403 aa9.55□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Znf521Q6KAS7 1311 aa9.55□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Gm973E9Q295 1059 aa9.55□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Nectin2P32507 530 aa9.55□□□□□ -0.88
Gm28772-201ENSMUST00000189554 4930548H24RikQ9D496 437 aa9.55□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Slx4Q6P1D7 1565 aa9.55□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Phlpp2Q8BXA7 1320 aa9.54□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Tbc1d4Q8BYJ6 1307 aa9.54□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Hsp90b1P08113 802 aaKnown RBP9.54□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Hvcn1Q3U2S8 269 aa9.54□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Taf3Q5HZG4 932 aa9.54□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Prr29B1ARI9 187 aa9.54□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Gm10093D3YYI8 482 aa9.54□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Hdac1O09106 482 aaKnown RBP9.54□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Bag4Q8CI61 457 aa9.54□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Cc2d1aQ8K1A6 943 aa9.54□□□□□ -0.88
Gm28772-201ENSMUST00000189554 C1qtnf12Q8R2Z0 308 aa9.54□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Kdm4cQ8VCD7 1054 aa9.54□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Atl3Q91YH5 541 aa9.54□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Rbm25B2RY56 838 aaKnown RBP9.53□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Irx2P81066 474 aa9.53□□□□□ -0.88
Gm28772-201ENSMUST00000189554 MvpQ9EQK5 861 aa9.53□□□□□ -0.88
Gm28772-201ENSMUST00000189554 AqrQ8CFQ3 1481 aaKnown RBP9.53□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Ms4a1P19437 291 aa9.53□□□□□ -0.88
Gm28772-201ENSMUST00000189554 EzrP26040 586 aaKnown RBP9.53□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Bach2P97303 839 aa9.53□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Nol10Q5RJG1 687 aaKnown RBP9.53□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Ppm1eQ80TL0 749 aa9.53□□□□□ -0.88
Gm28772-201ENSMUST00000189554 Cavin2Q63918 418 aaKnown RBP9.52□□□□□ -0.89
Gm28772-201ENSMUST00000189554 CalrP14211 416 aaKnown RBP9.51□□□□□ -0.89
Gm28772-201ENSMUST00000189554 Zkscan3Q91VW9 553 aa9.51□□□□□ -0.89
Gm28772-201ENSMUST00000189554 Nsfl1cQ9CZ44 370 aaKnown RBP9.51□□□□□ -0.89
Gm28772-201ENSMUST00000189554 Rusc2Q80U22 1514 aa9.51□□□□□ -0.89
Gm28772-201ENSMUST00000189554 Mbd5B1AYB6 1498 aa9.51□□□□□ -0.89
Gm28772-201ENSMUST00000189554 Nucb2P81117 420 aa9.51□□□□□ -0.89
Gm28772-201ENSMUST00000189554 Irf6P97431 467 aa9.51□□□□□ -0.89
Gm28772-201ENSMUST00000189554 RbsnQ80Y56 783 aa9.51□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 11.1 ms