RNA–Protein interactions for RNA: ENSMUST00000167671.1

Ckap4-202, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 2,606 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-202ENSMUST00000167671 Ksr2Q3UVC0 959 aa22.27■■□□□ 1.16
Ckap4-202ENSMUST00000167671 Stard8Q8K031 1019 aa22.27■■□□□ 1.16
Ckap4-202ENSMUST00000167671 Znf521Q6KAS7 1311 aa22.27■■□□□ 1.16
Ckap4-202ENSMUST00000167671 Spryd3E9Q9B3 442 aa22.27■■□□□ 1.15
Ckap4-202ENSMUST00000167671 Rangap1P46061 589 aaKnown RBP22.27■■□□□ 1.15
Ckap4-202ENSMUST00000167671 Puf60Q3UEB3 564 aaKnown RBP22.27■■□□□ 1.15
Ckap4-202ENSMUST00000167671 Abca8bQ8K440 1620 aa22.25■■□□□ 1.15
Ckap4-202ENSMUST00000167671 Pdlim2Q8R1G6 349 aa22.25■■□□□ 1.15
Ckap4-202ENSMUST00000167671 Cluap1Q8R3P7 413 aa22.25■■□□□ 1.15
Ckap4-202ENSMUST00000167671 Stag3O70576 1240 aa22.25■■□□□ 1.15
Ckap4-202ENSMUST00000167671 Map4k4P97820 1233 aaKnown RBP22.25■■□□□ 1.15
Ckap4-202ENSMUST00000167671 Myo5cE9Q1F5 1742 aa22.24■■□□□ 1.15
Ckap4-202ENSMUST00000167671 Nphp4P59240 1425 aa22.24■■□□□ 1.15
Ckap4-202ENSMUST00000167671 Pnmal2G3X9N3 661 aa22.24■■□□□ 1.15
Ckap4-202ENSMUST00000167671 Tmc1Q8R4P5 757 aa22.24■■□□□ 1.15
Ckap4-202ENSMUST00000167671 Cep152A2AUM9 1736 aaKnown RBP22.23■■□□□ 1.15
Ckap4-202ENSMUST00000167671 Myom1Q62234 1667 aaKnown RBP22.23■■□□□ 1.15
Ckap4-202ENSMUST00000167671 Ppp2r3aB2RXC8 1150 aa22.23■■□□□ 1.15
Ckap4-202ENSMUST00000167671 AatkQ80YE4 1365 aa22.21■■□□□ 1.15
Ckap4-202ENSMUST00000167671 Tnpo1Q8BFY9 898 aaKnown RBP22.21■■□□□ 1.15
Ckap4-202ENSMUST00000167671 Htatsf1Q8BGC0 757 aa22.21■■□□□ 1.15
Ckap4-202ENSMUST00000167671 Ipo4Q8VI75 1082 aa22.21■■□□□ 1.15
Ckap4-202ENSMUST00000167671 U2af1Q9D883 239 aaKnown RBP22.21■■□□□ 1.15
Ckap4-202ENSMUST00000167671 Kiaa1210E9Q0C6 1637 aa22.21■■□□□ 1.15
Ckap4-202ENSMUST00000167671 Gprasp1Q5U4C1 1347 aa22.21■■□□□ 1.15
Ckap4-202ENSMUST00000167671 IbtkQ6ZPR6 1352 aaKnown RBP22.2■■□□□ 1.15
Ckap4-202ENSMUST00000167671 Ppp1r3fQ9JIG4 799 aa22.2■■□□□ 1.14
Ckap4-202ENSMUST00000167671 Myom2Q14BI5 1463 aa22.2■■□□□ 1.14
Ckap4-202ENSMUST00000167671 Sptbn5F6UCX4 1208 aa22.2■■□□□ 1.14
Ckap4-202ENSMUST00000167671 Fgd1P52734 960 aa22.2■■□□□ 1.14
Ckap4-202ENSMUST00000167671 Abca6Q8K441 1624 aa22.18■■□□□ 1.14
Ckap4-202ENSMUST00000167671 Arid3cA6PWV5 409 aa22.18■■□□□ 1.14
Ckap4-202ENSMUST00000167671 Cdk5rap2Q8K389 1822 aa22.17■■□□□ 1.14
Ckap4-202ENSMUST00000167671 Cald1E9QA15 768 aaKnown RBP22.16■■□□□ 1.14
Ckap4-202ENSMUST00000167671 Tsen2Q6P7W5 460 aa22.16■■□□□ 1.14
Ckap4-202ENSMUST00000167671 Lemd3Q9WU40 921 aa22.16■■□□□ 1.14
Ckap4-202ENSMUST00000167671 Chd1P40201 1711 aa22.16■■□□□ 1.14
Ckap4-202ENSMUST00000167671 Iqgap3F8VQ29 1632 aa22.16■■□□□ 1.14
Ckap4-202ENSMUST00000167671 Scaf11E9PZM7 1456 aaKnown RBP22.15■■□□□ 1.14
Ckap4-202ENSMUST00000167671 Talpid3E9PV87 1520 aa22.14■■□□□ 1.14
Ckap4-202ENSMUST00000167671 Mfap1aC0HKD8 439 aaKnown RBP22.14■■□□□ 1.14
Ckap4-202ENSMUST00000167671 Mfap1bC0HKD9 439 aaKnown RBP22.14■■□□□ 1.14
Ckap4-202ENSMUST00000167671 Ecm2Q5FW85 670 aa22.14■■□□□ 1.14
Ckap4-202ENSMUST00000167671 Fam135bQ9DAI6 1403 aa22.14■■□□□ 1.13
Ckap4-202ENSMUST00000167671 Rims1Q99NE5 1463 aa22.13■■□□□ 1.13
Ckap4-202ENSMUST00000167671 Ccar1Q8CH18 1146 aaKnown RBP22.12■■□□□ 1.13
Ckap4-202ENSMUST00000167671 Znf330Q922H9 316 aa22.12■■□□□ 1.13
Ckap4-202ENSMUST00000167671 Rabep1O35551 862 aa22.12■■□□□ 1.13
Ckap4-202ENSMUST00000167671 Iqsec2Q5DU25 1478 aa22.12■■□□□ 1.13
Ckap4-202ENSMUST00000167671 Fndc1E9Q043 1732 aa22.1■■□□□ 1.13
Ckap4-202ENSMUST00000167671 Nos1Q9Z0J4 1429 aa22.1■■□□□ 1.13
Ckap4-202ENSMUST00000167671 Tbc1d32Q3URV1 1296 aa22.1■■□□□ 1.13
Ckap4-202ENSMUST00000167671 Zranb1Q7M760 708 aa22.09■■□□□ 1.13
Ckap4-202ENSMUST00000167671 Dusp27Q148W8 1138 aa22.09■■□□□ 1.13
Ckap4-202ENSMUST00000167671 Abca8aQ8K442 1620 aa22.08■■□□□ 1.13
Ckap4-202ENSMUST00000167671 Efcab6Q6P1E8 1516 aa22.07■■□□□ 1.12
Ckap4-202ENSMUST00000167671 IqubQ8CDK3 788 aa22.07■■□□□ 1.12
Ckap4-202ENSMUST00000167671 Dnttip2Q8R2M2 758 aaKnown RBP22.07■■□□□ 1.12
Ckap4-202ENSMUST00000167671 Zfyve16Q80U44 1528 aa22.06■■□□□ 1.12
Ckap4-202ENSMUST00000167671 AU019823E9PUQ3 292 aa22.06■■□□□ 1.12
Ckap4-202ENSMUST00000167671 Stk26Q99JT2 416 aa22.06■■□□□ 1.12
Ckap4-202ENSMUST00000167671 Atl3Q91YH5 541 aa22.05■■□□□ 1.12
Ckap4-202ENSMUST00000167671 Exosc9Q9JHI7 438 aaKnown RBP22.05■■□□□ 1.12
Ckap4-202ENSMUST00000167671 Tmem131lQ3U3D7 1597 aa22.05■■□□□ 1.12
Ckap4-202ENSMUST00000167671 Znf518aB2RRF6 1478 aaKnown RBP22.04■■□□□ 1.12
Ckap4-202ENSMUST00000167671 AU022751B1B0V2 589 aa22.04■■□□□ 1.12
Ckap4-202ENSMUST00000167671 AampJ3QN89 436 aa22.03■■□□□ 1.12
Ckap4-202ENSMUST00000167671 DnmbpQ6TXD4 1580 aa22.03■■□□□ 1.12
Ckap4-202ENSMUST00000167671 Uggt1Q6P5E4 1551 aa22.02■■□□□ 1.12
Ckap4-202ENSMUST00000167671 Adgrb3Q80ZF8 1522 aa22.02■■□□□ 1.12
Ckap4-202ENSMUST00000167671 Nutm1Q8BHP2 1126 aa22.02■■□□□ 1.12
Ckap4-202ENSMUST00000167671 Prex1Q69ZK0 1650 aa22.02■■□□□ 1.12
Ckap4-202ENSMUST00000167671 Catsper2A2ARP9 588 aa22.01■■□□□ 1.11
Ckap4-202ENSMUST00000167671 Phlpp2Q8BXA7 1320 aa22.01■■□□□ 1.11
Ckap4-202ENSMUST00000167671 Atp1b4Q99ME6 356 aa22.01■■□□□ 1.11
Ckap4-202ENSMUST00000167671 Antxr1Q9CZ52 562 aa22.01■■□□□ 1.11
Ckap4-202ENSMUST00000167671 Ehbp1l1Q99MS7 1716 aa22■■□□□ 1.11
Ckap4-202ENSMUST00000167671 CenpjQ569L8 1344 aa22■■□□□ 1.11
Ckap4-202ENSMUST00000167671 Ccdc60Q8C4J0 545 aa22■■□□□ 1.11
Ckap4-202ENSMUST00000167671 KdrP35918 1367 aa22■■□□□ 1.11
Ckap4-202ENSMUST00000167671 Igf1rQ60751 1373 aa22■■□□□ 1.11
Ckap4-202ENSMUST00000167671 InsrP15208 1372 aa21.99■■□□□ 1.11
Ckap4-202ENSMUST00000167671 Maco1Q7TQE6 664 aaKnown RBP21.99■■□□□ 1.11
Ckap4-202ENSMUST00000167671 Kcnn1Q9EQR3 537 aa21.99■■□□□ 1.11
Ckap4-202ENSMUST00000167671 PalldQ9ET54 1408 aa21.99■■□□□ 1.11
Ckap4-202ENSMUST00000167671 Abca9Q8K449 1623 aa21.99■■□□□ 1.11
Ckap4-202ENSMUST00000167671 Sipa1l1Q8C0T5 1782 aa21.98■■□□□ 1.11
Ckap4-202ENSMUST00000167671 Lrrc7Q80TE7 1490 aa21.98■■□□□ 1.11
Ckap4-202ENSMUST00000167671 AU015836B2RUM3 263 aa21.97■■□□□ 1.11
Ckap4-202ENSMUST00000167671 Senp3Q9EP97 568 aaKnown RBP21.97■■□□□ 1.11
Ckap4-202ENSMUST00000167671 CastP51125 788 aa21.96■■□□□ 1.11
Ckap4-202ENSMUST00000167671 Kif18aQ91WD7 886 aa21.96■■□□□ 1.11
Ckap4-202ENSMUST00000167671 Map7O88735 730 aa21.95■■□□□ 1.11
Ckap4-202ENSMUST00000167671 Aplp1Q03157 653 aa21.95■■□□□ 1.11
Ckap4-202ENSMUST00000167671 Kif2cQ922S8 721 aa21.95■■□□□ 1.11
Ckap4-202ENSMUST00000167671 Skint5A7XUY5 1461 aa21.95■■□□□ 1.1
Ckap4-202ENSMUST00000167671 Cog6Q8R3I3 657 aa21.95■■□□□ 1.1
Ckap4-202ENSMUST00000167671 Nectin2P32507 530 aa21.94■■□□□ 1.1
Ckap4-202ENSMUST00000167671 Cfap65Q3V0B4 1847 aa21.94■■□□□ 1.1
Ckap4-202ENSMUST00000167671 Rbm25B2RY56 838 aaKnown RBP21.94■■□□□ 1.1
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms