RNA–Protein interactions for RNA: ENSMUST00000164506.2

Ccdc43-205, Transcript of Coiled-coil domain-containing protein 43, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ccdc43, Length 2,316 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43-205ENSMUST00000164506 Usp40Q8BWR4 1235 aa20.21■□□□□ 0.83
Ccdc43-205ENSMUST00000164506 Sbno1Q689Z5 1390 aa20.21■□□□□ 0.83
Ccdc43-205ENSMUST00000164506 4930407I10RikD3Z5T8 1512 aa20.21■□□□□ 0.83
Ccdc43-205ENSMUST00000164506 Mak16Q8BGS0 296 aaKnown RBP20.2■□□□□ 0.82
Ccdc43-205ENSMUST00000164506 Kank1E9Q238 1360 aa20.2■□□□□ 0.82
Ccdc43-205ENSMUST00000164506 Tmf1B9EKI3 1091 aa20.2■□□□□ 0.82
Ccdc43-205ENSMUST00000164506 Erbb3Q61526 1339 aa20.19■□□□□ 0.82
Ccdc43-205ENSMUST00000164506 Zfp444Q3TDV8 331 aaKnown RBP20.19■□□□□ 0.82
Ccdc43-205ENSMUST00000164506 Dip2aQ8BWT5 1523 aa20.19■□□□□ 0.82
Ccdc43-205ENSMUST00000164506 Slc4a1apE9PX68 744 aa20.18■□□□□ 0.82
Ccdc43-205ENSMUST00000164506 Tex14Q7M6U3 1450 aa20.17■□□□□ 0.82
Ccdc43-205ENSMUST00000164506 Shq1Q7TMX5 569 aa20.15■□□□□ 0.82
Ccdc43-205ENSMUST00000164506 Gm16486A0A1D5RMD1 1434 aa20.15■□□□□ 0.82
Ccdc43-205ENSMUST00000164506 Kcnh8P59111 1102 aa20.14■□□□□ 0.81
Ccdc43-205ENSMUST00000164506 Lmtk3Q5XJV6 1424 aa20.14■□□□□ 0.81
Ccdc43-205ENSMUST00000164506 Fam184bQ0KK56 942 aa20.13■□□□□ 0.81
Ccdc43-205ENSMUST00000164506 Txndc2Q6P902 515 aa20.13■□□□□ 0.81
Ccdc43-205ENSMUST00000164506 Liat1Q810M6 228 aa20.13■□□□□ 0.81
Ccdc43-205ENSMUST00000164506 IqubQ8CDK3 788 aa20.13■□□□□ 0.81
Ccdc43-205ENSMUST00000164506 Atp1b4Q99ME6 356 aa20.12■□□□□ 0.81
Ccdc43-205ENSMUST00000164506 Arid4bA2CG63 1314 aaKnown RBP20.11■□□□□ 0.81
Ccdc43-205ENSMUST00000164506 Topaz1E5FYH1 1653 aa20.11■□□□□ 0.81
Ccdc43-205ENSMUST00000164506 Slit3Q9WVB4 1523 aa20.1■□□□□ 0.81
Ccdc43-205ENSMUST00000164506 MyclP10166 368 aa20.1■□□□□ 0.81
Ccdc43-205ENSMUST00000164506 Psme1P97371 249 aa20.1■□□□□ 0.81
Ccdc43-205ENSMUST00000164506 MlecQ6ZQI3 291 aaKnown RBP20.1■□□□□ 0.81
Ccdc43-205ENSMUST00000164506 Plekhg1F6S200 1446 aa20.1■□□□□ 0.81
Ccdc43-205ENSMUST00000164506 Rad21Q61550 635 aaKnown RBP20.09■□□□□ 0.81
Ccdc43-205ENSMUST00000164506 Slc4a3P16283 1227 aa20.09■□□□□ 0.81
Ccdc43-205ENSMUST00000164506 GphnQ8BUV3 769 aaKnown RBP20.09■□□□□ 0.81
Ccdc43-205ENSMUST00000164506 Q9D9H8 365 aa20.09■□□□□ 0.81
Ccdc43-205ENSMUST00000164506 Ppp2r1aQ76MZ3 589 aa20.08■□□□□ 0.81
Ccdc43-205ENSMUST00000164506 Stag3O70576 1240 aa20.08■□□□□ 0.8
Ccdc43-205ENSMUST00000164506 Upf2A2AT37 1269 aaKnown RBP20.06■□□□□ 0.8
Ccdc43-205ENSMUST00000164506 Rab3gap2Q8BMG7 1366 aa20.05■□□□□ 0.8
Ccdc43-205ENSMUST00000164506 Esx1O88933 382 aa20.04■□□□□ 0.8
Ccdc43-205ENSMUST00000164506 Rtl5Q5DTT4 599 aa20.04■□□□□ 0.8
Ccdc43-205ENSMUST00000164506 Pak3Q61036 559 aa20.04■□□□□ 0.8
Ccdc43-205ENSMUST00000164506 PzpQ61838 1495 aa20.03■□□□□ 0.8
Ccdc43-205ENSMUST00000164506 CenpjQ569L8 1344 aa20.03■□□□□ 0.8
Ccdc43-205ENSMUST00000164506 Mink1Q9JM52 1308 aa20.03■□□□□ 0.8
Ccdc43-205ENSMUST00000164506 Cep170bQ80U49 1574 aa20.03■□□□□ 0.8
Ccdc43-205ENSMUST00000164506 InsrP15208 1372 aa20.02■□□□□ 0.8
Ccdc43-205ENSMUST00000164506 Pik3r4Q8VD65 1358 aa20.02■□□□□ 0.8
Ccdc43-205ENSMUST00000164506 Arap3Q8R5G7 1538 aa20.02■□□□□ 0.8
Ccdc43-205ENSMUST00000164506 Utp14aQ640M1 767 aaKnown RBP20■□□□□ 0.79
Ccdc43-205ENSMUST00000164506 Stk26Q99JT2 416 aa20■□□□□ 0.79
Ccdc43-205ENSMUST00000164506 Cps1Q8C196 1500 aa19.99■□□□□ 0.79
Ccdc43-205ENSMUST00000164506 Kif16bB1AVY7 1312 aa19.98■□□□□ 0.79
Ccdc43-205ENSMUST00000164506 Atf7ipQ7TT18 1306 aa19.98■□□□□ 0.79
Ccdc43-205ENSMUST00000164506 Tcerg1Q8CGF7 1100 aaKnown RBP19.98■□□□□ 0.79
Ccdc43-205ENSMUST00000164506 Abca14E9Q8F8 1683 aa19.98■□□□□ 0.79
Ccdc43-205ENSMUST00000164506 Rimbp3Q3V0F0 1606 aa19.97■□□□□ 0.79
Ccdc43-205ENSMUST00000164506 IghaA0A0A6YXW6 389 aa19.97■□□□□ 0.79
Ccdc43-205ENSMUST00000164506 Egfem1Q8C088 590 aa19.97■□□□□ 0.79
Ccdc43-205ENSMUST00000164506 Asxl2Q8BZ32 1370 aa19.97■□□□□ 0.79
Ccdc43-205ENSMUST00000164506 Cnga1P29974 684 aa19.97■□□□□ 0.79
Ccdc43-205ENSMUST00000164506 CrbnQ8C7D2 445 aa19.97■□□□□ 0.79
Ccdc43-205ENSMUST00000164506 Nwd1A6H603 1563 aa19.96■□□□□ 0.79
Ccdc43-205ENSMUST00000164506 Kif7B7ZNG0 1348 aa19.96■□□□□ 0.79
Ccdc43-205ENSMUST00000164506 Dcaf11Q91VU6 549 aa19.96■□□□□ 0.79
Ccdc43-205ENSMUST00000164506 Ttc41Q692V3 1318 aa19.94■□□□□ 0.78
Ccdc43-205ENSMUST00000164506 Prkrip1Q9CWV6 186 aaKnown RBP19.93■□□□□ 0.78
Ccdc43-205ENSMUST00000164506 NeflP08551 543 aa19.93■□□□□ 0.78
Ccdc43-205ENSMUST00000164506 Scaf11E9PZM7 1456 aaKnown RBP19.91■□□□□ 0.78
Ccdc43-205ENSMUST00000164506 Brwd3A2AHJ4 1799 aa19.91■□□□□ 0.78
Ccdc43-205ENSMUST00000164506 Prdm10Q3UTQ7 1184 aa19.91■□□□□ 0.78
Ccdc43-205ENSMUST00000164506 Rims2Q9EQZ7 1530 aa19.9■□□□□ 0.78
Ccdc43-205ENSMUST00000164506 TnikP83510 1323 aa19.9■□□□□ 0.78
Ccdc43-205ENSMUST00000164506 Atp2b2Q9R0K7 1198 aa19.9■□□□□ 0.78
Ccdc43-205ENSMUST00000164506 NktrP30415 1453 aa19.9■□□□□ 0.78
Ccdc43-205ENSMUST00000164506 Phlpp1Q8CHE4 1687 aa19.89■□□□□ 0.78
Ccdc43-205ENSMUST00000164506 Nlrp6Q91WS2 869 aa19.87■□□□□ 0.77
Ccdc43-205ENSMUST00000164506 Med1Q925J9 1575 aa19.87■□□□□ 0.77
Ccdc43-205ENSMUST00000164506 Gprasp1Q5U4C1 1347 aa19.86■□□□□ 0.77
Ccdc43-205ENSMUST00000164506 Usp19Q3UJD6 1360 aa19.86■□□□□ 0.77
Ccdc43-205ENSMUST00000164506 Usp32F8VPZ3 1604 aa19.86■□□□□ 0.77
Ccdc43-205ENSMUST00000164506 Gsto1O09131 240 aa19.84■□□□□ 0.77
Ccdc43-205ENSMUST00000164506 Plekhh1Q80TI1 1356 aa19.84■□□□□ 0.77
Ccdc43-205ENSMUST00000164506 Rreb1Q3UH06 1700 aaKnown RBP19.82■□□□□ 0.76
Ccdc43-205ENSMUST00000164506 FanciQ8K368 1330 aa19.82■□□□□ 0.76
Ccdc43-205ENSMUST00000164506 Cdk19Q8BWD8 501 aa19.82■□□□□ 0.76
Ccdc43-205ENSMUST00000164506 Speer4f1Q9D5Q6 258 aa19.82■□□□□ 0.76
Ccdc43-205ENSMUST00000164506 Exosc9Q9JHI7 438 aaKnown RBP19.82■□□□□ 0.76
Ccdc43-205ENSMUST00000164506 HnrnpmQ9D0E1 729 aaKnown RBP19.81■□□□□ 0.76
Ccdc43-205ENSMUST00000164506 Mbd3Q9Z2D8 285 aaKnown RBP19.81■□□□□ 0.76
Ccdc43-205ENSMUST00000164506 Nrxn1Q9CS84 1514 aa19.81■□□□□ 0.76
Ccdc43-205ENSMUST00000164506 Kiaa1107Q80TK0 1369 aa19.81■□□□□ 0.76
Ccdc43-205ENSMUST00000164506 Kif20bQ80WE4 1774 aaKnown RBP19.8■□□□□ 0.76
Ccdc43-205ENSMUST00000164506 Thsd7aQ69ZU6 1645 aa19.8■□□□□ 0.76
Ccdc43-205ENSMUST00000164506 Pik3c2bE9QAN8 1632 aa19.79■□□□□ 0.76
Ccdc43-205ENSMUST00000164506 Rwdd1Q9CQK7 243 aa19.79■□□□□ 0.76
Ccdc43-205ENSMUST00000164506 Adgrl1Q80TR1 1466 aa19.79■□□□□ 0.76
Ccdc43-205ENSMUST00000164506 Nrxn3Q6P9K9 1571 aa19.79■□□□□ 0.76
Ccdc43-205ENSMUST00000164506 D430041D05RikF6ZGR6 1678 aa19.79■□□□□ 0.76
Ccdc43-205ENSMUST00000164506 KdrP35918 1367 aa19.78■□□□□ 0.76
Ccdc43-205ENSMUST00000164506 Tnrc6bQ8BKI2 1810 aaKnown RBP19.78■□□□□ 0.76
Ccdc43-205ENSMUST00000164506 Ccdc30Q8BVF4 654 aa19.78■□□□□ 0.76
Ccdc43-205ENSMUST00000164506 Zranb1Q7M760 708 aa19.77■□□□□ 0.76
Ccdc43-205ENSMUST00000164506 Neurod2Q62414 383 aa19.76■□□□□ 0.75
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms