RNA–Protein interactions for RNA: ENSMUST00000164052.4

Vps50-202, Transcript of Syndetin, mousemouse

TSL 1 (best) BASIC

Gene Vps50, Length 4,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50-202ENSMUST00000164052 Sh3bp1P55194 680 aa6.83□□□□□ -1.32
Vps50-202ENSMUST00000164052 Cluap1Q8R3P7 413 aa6.83□□□□□ -1.32
Vps50-202ENSMUST00000164052 Irx4Q9QY61 515 aa6.83□□□□□ -1.32
Vps50-202ENSMUST00000164052 Nectin2P32507 530 aa6.83□□□□□ -1.32
Vps50-202ENSMUST00000164052 Shroom2A2ALU4 1481 aa6.83□□□□□ -1.32
Vps50-202ENSMUST00000164052 Casc1Q6TDU8 730 aa6.82□□□□□ -1.32
Vps50-202ENSMUST00000164052 Sass6Q80UK7 654 aa6.82□□□□□ -1.32
Vps50-202ENSMUST00000164052 Gm10093D3YYI8 482 aa6.82□□□□□ -1.32
Vps50-202ENSMUST00000164052 Hdac1O09106 482 aaKnown RBP6.82□□□□□ -1.32
Vps50-202ENSMUST00000164052 Zscan10Q3URR7 782 aa6.82□□□□□ -1.32
Vps50-202ENSMUST00000164052 Ncapd2Q8K2Z4 1392 aa6.82□□□□□ -1.32
Vps50-202ENSMUST00000164052 Cavin1O54724 392 aa6.82□□□□□ -1.32
Vps50-202ENSMUST00000164052 Anp32cQ64G17 123 aa6.82□□□□□ -1.32
Vps50-202ENSMUST00000164052 Rnf214Q8BFU3 668 aaKnown RBP6.82□□□□□ -1.32
Vps50-202ENSMUST00000164052 Dennd4bQ3U1Y4 1499 aa6.82□□□□□ -1.32
Vps50-202ENSMUST00000164052 Gpatch11Q3UFS4 262 aa6.81□□□□□ -1.32
Vps50-202ENSMUST00000164052 Pnma3Q8JZW8 466 aa6.81□□□□□ -1.32
Vps50-202ENSMUST00000164052 Atp2b3Q0VF55 1220 aa6.81□□□□□ -1.32
Vps50-202ENSMUST00000164052 Bms1Q6PGF5 1284 aaKnown RBP6.81□□□□□ -1.32
Vps50-202ENSMUST00000164052 Zkscan1Q8BGS3 561 aaKnown RBP6.81□□□□□ -1.32
Vps50-202ENSMUST00000164052 Kdm4aQ8BW72 1064 aa6.81□□□□□ -1.32
Vps50-202ENSMUST00000164052 Inpp5dQ9ES52 1191 aa6.81□□□□□ -1.32
Vps50-202ENSMUST00000164052 Gapvd1Q6PAR5 1458 aa6.81□□□□□ -1.32
Vps50-202ENSMUST00000164052 NmiO35309 314 aa6.81□□□□□ -1.32
Vps50-202ENSMUST00000164052 Hmgb2P30681 210 aaKnown RBP6.81□□□□□ -1.32
Vps50-202ENSMUST00000164052 Cdkn1cP49919 348 aa6.81□□□□□ -1.32
Vps50-202ENSMUST00000164052 Dnajc2P54103 621 aaKnown RBP6.81□□□□□ -1.32
Vps50-202ENSMUST00000164052 Hvcn1Q3U2S8 269 aa6.81□□□□□ -1.32
Vps50-202ENSMUST00000164052 1700010I14RikQ7TPG0 532 aa6.81□□□□□ -1.32
Vps50-202ENSMUST00000164052 Golga2Q921M4 999 aa6.81□□□□□ -1.32
Vps50-202ENSMUST00000164052 Setbp1Q9Z180 1582 aa6.81□□□□□ -1.32
Vps50-202ENSMUST00000164052 Duxf3A0A0N4SV92 674 aa6.81□□□□□ -1.32
Vps50-202ENSMUST00000164052 Hs1bp3Q3TC93 395 aa6.81□□□□□ -1.32
Vps50-202ENSMUST00000164052 Tbc1d31Q6NXY1 996 aa6.81□□□□□ -1.32
Vps50-202ENSMUST00000164052 Arhgef12Q8R4H2 1543 aaKnown RBP6.81□□□□□ -1.32
Vps50-202ENSMUST00000164052 Anapc15-psA0A140T8L6 141 aa6.8□□□□□ -1.32
Vps50-202ENSMUST00000164052 Tpm3P21107 285 aaKnown RBP6.8□□□□□ -1.32
Vps50-202ENSMUST00000164052 Brd2Q7JJ13 798 aaKnown RBP6.8□□□□□ -1.32
Vps50-202ENSMUST00000164052 Polr1aO35134 1717 aaKnown RBP6.8□□□□□ -1.32
Vps50-202ENSMUST00000164052 Ak9G3UYQ4 1894 aa6.8□□□□□ -1.32
Vps50-202ENSMUST00000164052 Rbm25B2RY56 838 aaKnown RBP6.8□□□□□ -1.32
Vps50-202ENSMUST00000164052 Ddit3P35639 168 aa6.8□□□□□ -1.32
Vps50-202ENSMUST00000164052 Mug2P28666 1451 aa6.8□□□□□ -1.32
Vps50-202ENSMUST00000164052 Plekhh2Q8C115 1491 aa6.8□□□□□ -1.32
Vps50-202ENSMUST00000164052 Cspp1B2RX88 1205 aa6.8□□□□□ -1.32
Vps50-202ENSMUST00000164052 Syce3B5KM66 88 aa6.8□□□□□ -1.32
Vps50-202ENSMUST00000164052 U2af2P26369 475 aaKnown RBP6.8□□□□□ -1.32
Vps50-202ENSMUST00000164052 Ppp2r1aQ76MZ3 589 aa6.8□□□□□ -1.32
Vps50-202ENSMUST00000164052 Rlbp1Q9Z275 317 aa6.8□□□□□ -1.32
Vps50-202ENSMUST00000164052 RalgapbQ8BQZ4 1484 aa6.8□□□□□ -1.32
Vps50-202ENSMUST00000164052 Rab3gap2Q8BMG7 1366 aa6.79□□□□□ -1.32
Vps50-202ENSMUST00000164052 Ptgs1P22437 602 aa6.79□□□□□ -1.32
Vps50-202ENSMUST00000164052 Ncbp1Q3UYV9 790 aaKnown RBP6.79□□□□□ -1.32
Vps50-202ENSMUST00000164052 GorabQ8BRM2 368 aa6.79□□□□□ -1.32
Vps50-202ENSMUST00000164052 Zfp644E9QA22 1323 aa6.79□□□□□ -1.32
Vps50-202ENSMUST00000164052 Arhgap4B1AUY3 965 aa6.79□□□□□ -1.32
Vps50-202ENSMUST00000164052 Zscan25B2RX31 543 aa6.79□□□□□ -1.32
Vps50-202ENSMUST00000164052 Fam184aE9PW83 1143 aa6.79□□□□□ -1.32
Vps50-202ENSMUST00000164052 Arglu1Q3UL36 271 aaKnown RBP6.79□□□□□ -1.32
Vps50-202ENSMUST00000164052 Nsfl1cQ9CZ44 370 aaKnown RBP6.79□□□□□ -1.32
Vps50-202ENSMUST00000164052 Olfml1Q8BSH2 233 aa6.79□□□□□ -1.32
Vps50-202ENSMUST00000164052 Kif18aQ91WD7 886 aa6.79□□□□□ -1.32
Vps50-202ENSMUST00000164052 Pnmal2G3X9N3 661 aa6.79□□□□□ -1.32
Vps50-202ENSMUST00000164052 Znf771Q8BJ90 317 aa6.79□□□□□ -1.32
Vps50-202ENSMUST00000164052 Q8BT18 775 aa6.79□□□□□ -1.32
Vps50-202ENSMUST00000164052 Podxl2Q8CAE9 603 aa6.79□□□□□ -1.32
Vps50-202ENSMUST00000164052 Kdm4cQ8VCD7 1054 aa6.79□□□□□ -1.32
Vps50-202ENSMUST00000164052 Bloc1s4Q8VED2 215 aa6.79□□□□□ -1.32
Vps50-202ENSMUST00000164052 Kif7B7ZNG0 1348 aa6.78□□□□□ -1.32
Vps50-202ENSMUST00000164052 Atf7ipQ7TT18 1306 aa6.78□□□□□ -1.32
Vps50-202ENSMUST00000164052 Rasa1E9PYG6 1038 aa6.78□□□□□ -1.32
Vps50-202ENSMUST00000164052 Lmo7E9PYF4 1699 aaKnown RBP6.78□□□□□ -1.32
Vps50-202ENSMUST00000164052 Tex14Q7M6U3 1450 aa6.78□□□□□ -1.32
Vps50-202ENSMUST00000164052 GphnQ8BUV3 769 aaKnown RBP6.78□□□□□ -1.32
Vps50-202ENSMUST00000164052 1700017N19RikA0A087WPJ1 469 aa6.78□□□□□ -1.32
Vps50-202ENSMUST00000164052 Tpd52l1O54818 204 aa6.78□□□□□ -1.32
Vps50-202ENSMUST00000164052 Serpina10Q8R121 448 aa6.78□□□□□ -1.32
Vps50-202ENSMUST00000164052 DroshaQ5HZJ0 1373 aaKnown RBP6.78□□□□□ -1.32
Vps50-202ENSMUST00000164052 Mbd5B1AYB6 1498 aa6.78□□□□□ -1.32
Vps50-202ENSMUST00000164052 Gtpbp6Q3U6U5 514 aa6.78□□□□□ -1.32
Vps50-202ENSMUST00000164052 TnnQ80Z71 1560 aa6.77□□□□□ -1.32
Vps50-202ENSMUST00000164052 Tshz1Q5DTH5 1084 aa6.77□□□□□ -1.33
Vps50-202ENSMUST00000164052 Trak1Q6PD31 939 aa6.77□□□□□ -1.33
Vps50-202ENSMUST00000164052 Ccdc96Q9CR92 584 aa6.77□□□□□ -1.33
Vps50-202ENSMUST00000164052 PrxO55103 1391 aa6.77□□□□□ -1.33
Vps50-202ENSMUST00000164052 Kif2aP28740 705 aa6.77□□□□□ -1.33
Vps50-202ENSMUST00000164052 Rbm27Q5SFM8 1060 aaKnown RBP6.77□□□□□ -1.33
Vps50-202ENSMUST00000164052 Cog6Q8R3I3 657 aa6.77□□□□□ -1.33
Vps50-202ENSMUST00000164052 Nucb2P81117 420 aa6.77□□□□□ -1.33
Vps50-202ENSMUST00000164052 SkilQ60665 675 aa6.77□□□□□ -1.33
Vps50-202ENSMUST00000164052 Asxl1P59598 1514 aa6.77□□□□□ -1.33
Vps50-202ENSMUST00000164052 Dhx9O70133 1380 aaKnown RBP6.77□□□□□ -1.33
Vps50-202ENSMUST00000164052 Clasp1Q80TV8 1535 aaKnown RBP6.76□□□□□ -1.33
Vps50-202ENSMUST00000164052 Rrp7aQ9D1C9 280 aaKnown RBP6.76□□□□□ -1.33
Vps50-202ENSMUST00000164052 Fam135bQ9DAI6 1403 aa6.76□□□□□ -1.33
Vps50-202ENSMUST00000164052 Znf521Q6KAS7 1311 aa6.76□□□□□ -1.33
Vps50-202ENSMUST00000164052 Brpf1B2RRD7 1212 aa6.76□□□□□ -1.33
Vps50-202ENSMUST00000164052 Anp32eP97822 260 aaKnown RBP6.76□□□□□ -1.33
Vps50-202ENSMUST00000164052 Pip4k2bQ80XI4 416 aa6.76□□□□□ -1.33
Vps50-202ENSMUST00000164052 Sf3b2Q3UJB0 878 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 68.6 ms