RNA–Protein interactions for RNA: ENSMUST00000122063.7

Ift88-201, Transcript of Intraflagellar transport protein 88 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ift88, Length 3,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88-201ENSMUST00000122063 Dbr1Q923B1 550 aa14.37□□□□□ -0.11
Ift88-201ENSMUST00000122063 Trim26Q99PN3 545 aa14.37□□□□□ -0.11
Ift88-201ENSMUST00000122063 Cul9Q80TT8 1865 aa14.37□□□□□ -0.11
Ift88-201ENSMUST00000122063 Usp19Q3UJD6 1360 aa14.36□□□□□ -0.11
Ift88-201ENSMUST00000122063 Knl1Q66JQ7 1612 aa14.36□□□□□ -0.11
Ift88-201ENSMUST00000122063 Afap1Q80YS6 731 aa14.36□□□□□ -0.11
Ift88-201ENSMUST00000122063 Q9D9H8 365 aa14.36□□□□□ -0.11
Ift88-201ENSMUST00000122063 Egfem1Q8C088 590 aa14.35□□□□□ -0.11
Ift88-201ENSMUST00000122063 Kiaa1107Q80TK0 1369 aa14.35□□□□□ -0.11
Ift88-201ENSMUST00000122063 Skint5A7XUY5 1461 aa14.35□□□□□ -0.11
Ift88-201ENSMUST00000122063 Plppr3Q7TPB0 716 aa14.35□□□□□ -0.11
Ift88-201ENSMUST00000122063 Ino80Q6ZPV2 1559 aa14.34□□□□□ -0.11
Ift88-201ENSMUST00000122063 Trpm1Q2TV84 1622 aa14.34□□□□□ -0.11
Ift88-201ENSMUST00000122063 Myom1Q62234 1667 aaKnown RBP14.34□□□□□ -0.11
Ift88-201ENSMUST00000122063 Akap12Q9WTQ5 1684 aa14.34□□□□□ -0.11
Ift88-201ENSMUST00000122063 GsdmaQ9EST1 446 aa14.34□□□□□ -0.11
Ift88-201ENSMUST00000122063 DnmbpQ6TXD4 1580 aa14.34□□□□□ -0.11
Ift88-201ENSMUST00000122063 Gas2l2Q5SSG4 860 aa14.33□□□□□ -0.11
Ift88-201ENSMUST00000122063 Utp14aQ640M1 767 aaKnown RBP14.33□□□□□ -0.12
Ift88-201ENSMUST00000122063 Atxn3Q9CVD2 355 aa14.33□□□□□ -0.12
Ift88-201ENSMUST00000122063 U2af1Q9D883 239 aaKnown RBP14.33□□□□□ -0.12
Ift88-201ENSMUST00000122063 Slc52a2Q9D8F3 450 aa14.33□□□□□ -0.12
Ift88-201ENSMUST00000122063 Adgrl3Q80TS3 1537 aa14.32□□□□□ -0.12
Ift88-201ENSMUST00000122063 Sipa1l1Q8C0T5 1782 aa14.32□□□□□ -0.12
Ift88-201ENSMUST00000122063 Prrc2bQ7TPM1 1486 aaKnown RBP14.32□□□□□ -0.12
Ift88-201ENSMUST00000122063 InsrP15208 1372 aa14.31□□□□□ -0.12
Ift88-201ENSMUST00000122063 Apaf1O88879 1249 aa14.31□□□□□ -0.12
Ift88-201ENSMUST00000122063 Rangap1P46061 589 aaKnown RBP14.31□□□□□ -0.12
Ift88-201ENSMUST00000122063 Tecpr2Q3UH45 1423 aa14.31□□□□□ -0.12
Ift88-201ENSMUST00000122063 P2rx7Q9Z1M0 595 aa14.3□□□□□ -0.12
Ift88-201ENSMUST00000122063 Plxnc1Q9QZC2 1574 aa14.3□□□□□ -0.12
Ift88-201ENSMUST00000122063 Mroh1E0CZ22 1640 aa14.3□□□□□ -0.12
Ift88-201ENSMUST00000122063 Tsen2Q6P7W5 460 aa14.3□□□□□ -0.12
Ift88-201ENSMUST00000122063 Mbd3Q9Z2D8 285 aaKnown RBP14.3□□□□□ -0.12
Ift88-201ENSMUST00000122063 Cald1E9QA15 768 aaKnown RBP14.29□□□□□ -0.12
Ift88-201ENSMUST00000122063 Ttll13A4Q9F6 804 aa14.28□□□□□ -0.12
Ift88-201ENSMUST00000122063 Gprasp1Q5U4C1 1347 aa14.28□□□□□ -0.12
Ift88-201ENSMUST00000122063 IbtkQ6ZPR6 1352 aaKnown RBP14.28□□□□□ -0.12
Ift88-201ENSMUST00000122063 Uspl1Q3ULM6 1089 aa14.28□□□□□ -0.12
Ift88-201ENSMUST00000122063 Ralbp1Q62172 648 aa14.28□□□□□ -0.12
Ift88-201ENSMUST00000122063 Atp2b2Q9R0K7 1198 aa14.28□□□□□ -0.12
Ift88-201ENSMUST00000122063 Scaf11E9PZM7 1456 aaKnown RBP14.28□□□□□ -0.12
Ift88-201ENSMUST00000122063 Pank1Q8K4K6 548 aa14.27□□□□□ -0.12
Ift88-201ENSMUST00000122063 Znf316Q6PGE4 1016 aa14.27□□□□□ -0.13
Ift88-201ENSMUST00000122063 Hfm1D3Z4R1 1434 aa14.26□□□□□ -0.13
Ift88-201ENSMUST00000122063 Chmp5Q9D7S9 219 aa14.26□□□□□ -0.13
Ift88-201ENSMUST00000122063 Ahdc1Q6PAL7 1594 aaKnown RBP14.26□□□□□ -0.13
Ift88-201ENSMUST00000122063 MaddQ80U28 1577 aa14.26□□□□□ -0.13
Ift88-201ENSMUST00000122063 Tspyl2Q7TQI8 677 aa14.26□□□□□ -0.13
Ift88-201ENSMUST00000122063 ChgaP26339 463 aaKnown RBP14.25□□□□□ -0.13
Ift88-201ENSMUST00000122063 Ipo9Q91YE6 1041 aa14.25□□□□□ -0.13
Ift88-201ENSMUST00000122063 Cep170bQ80U49 1574 aa14.25□□□□□ -0.13
Ift88-201ENSMUST00000122063 Ttc41Q692V3 1318 aa14.24□□□□□ -0.13
Ift88-201ENSMUST00000122063 Gsto1O09131 240 aa14.24□□□□□ -0.13
Ift88-201ENSMUST00000122063 Ksr2Q3UVC0 959 aa14.24□□□□□ -0.13
Ift88-201ENSMUST00000122063 Asxl2Q8BZ32 1370 aa14.24□□□□□ -0.13
Ift88-201ENSMUST00000122063 Kiaa0556Q8C753 1610 aa14.24□□□□□ -0.13
Ift88-201ENSMUST00000122063 Armcx1Q9CX83 456 aa14.24□□□□□ -0.13
Ift88-201ENSMUST00000122063 Cdk19Q8BWD8 501 aa14.23□□□□□ -0.13
Ift88-201ENSMUST00000122063 Ttc37F8VPK0 1563 aa14.23□□□□□ -0.13
Ift88-201ENSMUST00000122063 Synj2Q9D2G5 1434 aa14.23□□□□□ -0.13
Ift88-201ENSMUST00000122063 Qser1A2BIE1 1698 aa14.22□□□□□ -0.13
Ift88-201ENSMUST00000122063 TnikP83510 1323 aa14.22□□□□□ -0.13
Ift88-201ENSMUST00000122063 Map4k4P97820 1233 aaKnown RBP14.22□□□□□ -0.13
Ift88-201ENSMUST00000122063 Mapk8ip3Q9ESN9 1337 aa14.22□□□□□ -0.13
Ift88-201ENSMUST00000122063 Adamts7Q68SA9 1657 aa14.22□□□□□ -0.13
Ift88-201ENSMUST00000122063 Ift172Q6VH22 1749 aa14.21□□□□□ -0.13
Ift88-201ENSMUST00000122063 Eif2ak4Q9QZ05 1648 aa14.21□□□□□ -0.13
Ift88-201ENSMUST00000122063 Hecw2Q6I6G8 1578 aa14.21□□□□□ -0.13
Ift88-201ENSMUST00000122063 NinlQ6ZQ12 1394 aa14.21□□□□□ -0.14
Ift88-201ENSMUST00000122063 Birc3O08863 600 aa14.21□□□□□ -0.14
Ift88-201ENSMUST00000122063 PtprmP28828 1452 aa14.2□□□□□ -0.14
Ift88-201ENSMUST00000122063 Txndc2Q6P902 515 aa14.2□□□□□ -0.14
Ift88-201ENSMUST00000122063 EspnQ9ET47 871 aa14.2□□□□□ -0.14
Ift88-201ENSMUST00000122063 Arhgap23Q69ZH9 1483 aa14.2□□□□□ -0.14
Ift88-201ENSMUST00000122063 Kdm2bQ6P1G2 1309 aa14.2□□□□□ -0.14
Ift88-201ENSMUST00000122063 4930567H17RikQ3V0K5 233 aa14.19□□□□□ -0.14
Ift88-201ENSMUST00000122063 Senp3Q9EP97 568 aaKnown RBP14.19□□□□□ -0.14
Ift88-201ENSMUST00000122063 CltcQ68FD5 1675 aaKnown RBP14.18□□□□□ -0.14
Ift88-201ENSMUST00000122063 Trim30dE9PWL0 497 aa14.18□□□□□ -0.14
Ift88-201ENSMUST00000122063 Psme1P97371 249 aa14.18□□□□□ -0.14
Ift88-201ENSMUST00000122063 Dusp27Q148W8 1138 aa14.17□□□□□ -0.14
Ift88-201ENSMUST00000122063 Kif13aQ9EQW7 1749 aa14.17□□□□□ -0.14
Ift88-201ENSMUST00000122063 Naip7Q9JIB3 1402 aa14.16□□□□□ -0.14
Ift88-201ENSMUST00000122063 CanxP35564 591 aaKnown RBP14.16□□□□□ -0.14
Ift88-201ENSMUST00000122063 KdrP35918 1367 aa14.16□□□□□ -0.14
Ift88-201ENSMUST00000122063 NpatQ8BMA5 1420 aa14.15□□□□□ -0.14
Ift88-201ENSMUST00000122063 ArxO35085 564 aa14.15□□□□□ -0.14
Ift88-201ENSMUST00000122063 Trim58Q5NCC9 485 aa14.15□□□□□ -0.14
Ift88-201ENSMUST00000122063 Znf330Q922H9 316 aa14.14□□□□□ -0.15
Ift88-201ENSMUST00000122063 Iqsec2Q5DU25 1478 aa14.14□□□□□ -0.15
Ift88-201ENSMUST00000122063 Nrxn1Q9CS84 1514 aa14.14□□□□□ -0.15
Ift88-201ENSMUST00000122063 Ercc6l2Q9JIM3 1537 aa14.14□□□□□ -0.15
Ift88-201ENSMUST00000122063 Plin1Q8CGN5 517 aa14.13□□□□□ -0.15
Ift88-201ENSMUST00000122063 Ccar1Q8CH18 1146 aaKnown RBP14.13□□□□□ -0.15
Ift88-201ENSMUST00000122063 Smc5Q8CG46 1101 aaKnown RBP14.13□□□□□ -0.15
Ift88-201ENSMUST00000122063 FanciQ8K368 1330 aa14.13□□□□□ -0.15
Ift88-201ENSMUST00000122063 Abca14E9Q8F8 1683 aa14.12□□□□□ -0.15
Ift88-201ENSMUST00000122063 Arhgef28P97433 1693 aa14.12□□□□□ -0.15
Ift88-201ENSMUST00000122063 Rsph4aQ8BYM7 716 aa14.12□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 23.2 ms