RNA–Protein interactions for RNA: ENSMUST00000117549.7

Ube4a-202, Transcript of Ubiquitin conjugation factor E4 A, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ube4a, Length 3,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4a-202ENSMUST00000117549 Samd1D3YXK1 519 aa8.22□□□□□ -1.09
Ube4a-202ENSMUST00000117549 PzpQ61838 1495 aa8.22□□□□□ -1.09
Ube4a-202ENSMUST00000117549 Ncoa1P70365 1447 aa8.22□□□□□ -1.09
Ube4a-202ENSMUST00000117549 Rimbp3Q3V0F0 1606 aa8.22□□□□□ -1.09
Ube4a-202ENSMUST00000117549 Ksr2Q3UVC0 959 aa8.22□□□□□ -1.09
Ube4a-202ENSMUST00000117549 Safb2Q80YR5 991 aaKnown RBP8.21□□□□□ -1.09
Ube4a-202ENSMUST00000117549 Erbb3Q61526 1339 aa8.21□□□□□ -1.1
Ube4a-202ENSMUST00000117549 SlkO54988 1233 aa8.2□□□□□ -1.1
Ube4a-202ENSMUST00000117549 U2af1Q9D883 239 aaKnown RBP8.2□□□□□ -1.1
Ube4a-202ENSMUST00000117549 CltcQ68FD5 1675 aaKnown RBP8.2□□□□□ -1.1
Ube4a-202ENSMUST00000117549 U2surpQ6NV83 1029 aaKnown RBP8.2□□□□□ -1.1
Ube4a-202ENSMUST00000117549 Naip5Q9R016 1403 aa8.2□□□□□ -1.1
Ube4a-202ENSMUST00000117549 Nup155Q99P88 1391 aaKnown RBP8.19□□□□□ -1.1
Ube4a-202ENSMUST00000117549 Srpk2O54781 681 aaKnown RBP8.19□□□□□ -1.1
Ube4a-202ENSMUST00000117549 Cc2d1aQ8K1A6 943 aa8.19□□□□□ -1.1
Ube4a-202ENSMUST00000117549 Plekhh2Q8C115 1491 aa8.19□□□□□ -1.1
Ube4a-202ENSMUST00000117549 EspnQ9ET47 871 aa8.19□□□□□ -1.1
Ube4a-202ENSMUST00000117549 Stag3O70576 1240 aa8.19□□□□□ -1.1
Ube4a-202ENSMUST00000117549 Srcin1Q9QWI6 1250 aa8.19□□□□□ -1.1
Ube4a-202ENSMUST00000117549 Rfx7F8VPJ6 1459 aa8.18□□□□□ -1.1
Ube4a-202ENSMUST00000117549 Akap12Q9WTQ5 1684 aa8.18□□□□□ -1.1
Ube4a-202ENSMUST00000117549 Vps8Q0P5W1 1427 aa8.18□□□□□ -1.1
Ube4a-202ENSMUST00000117549 NudcO35685 332 aaKnown RBP8.18□□□□□ -1.1
Ube4a-202ENSMUST00000117549 Golga2Q921M4 999 aa8.18□□□□□ -1.1
Ube4a-202ENSMUST00000117549 Cfap65Q3V0B4 1847 aa8.18□□□□□ -1.1
Ube4a-202ENSMUST00000117549 Abcc5Q9R1X5 1436 aa8.17□□□□□ -1.1
Ube4a-202ENSMUST00000117549 GphnQ8BUV3 769 aaKnown RBP8.17□□□□□ -1.1
Ube4a-202ENSMUST00000117549 Ccdc9Q8VC31 543 aaKnown RBP8.17□□□□□ -1.1
Ube4a-202ENSMUST00000117549 Fhad1A6PWD2 1420 aa8.17□□□□□ -1.1
Ube4a-202ENSMUST00000117549 Birc3O08863 600 aa8.17□□□□□ -1.1
Ube4a-202ENSMUST00000117549 Zscan10Q3URR7 782 aa8.17□□□□□ -1.1
Ube4a-202ENSMUST00000117549 Pnmal2G3X9N3 661 aa8.16□□□□□ -1.1
Ube4a-202ENSMUST00000117549 Kif3bQ61771 747 aa8.16□□□□□ -1.1
Ube4a-202ENSMUST00000117549 Exosc9Q9JHI7 438 aaKnown RBP8.16□□□□□ -1.1
Ube4a-202ENSMUST00000117549 Rock2P70336 1388 aa8.16□□□□□ -1.1
Ube4a-202ENSMUST00000117549 Kif7B7ZNG0 1348 aa8.16□□□□□ -1.1
Ube4a-202ENSMUST00000117549 Ltbp4Q8K4G1 1666 aa8.16□□□□□ -1.1
Ube4a-202ENSMUST00000117549 Hfm1D3Z4R1 1434 aa8.15□□□□□ -1.1
Ube4a-202ENSMUST00000117549 Ccdc30Q8BVF4 654 aa8.15□□□□□ -1.1
Ube4a-202ENSMUST00000117549 Cypt1Q8CH20 168 aa8.15□□□□□ -1.1
Ube4a-202ENSMUST00000117549 Kdm3bQ6ZPY7 1562 aa8.15□□□□□ -1.1
Ube4a-202ENSMUST00000117549 Chd2E9PZM4 1827 aaKnown RBP8.15□□□□□ -1.1
Ube4a-202ENSMUST00000117549 Scn4aQ9ER60 1841 aa8.15□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Uggt1Q6P5E4 1551 aa8.15□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Tmf1B9EKI3 1091 aa8.15□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Map3k5O35099 1380 aa8.14□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Tnnt1O88346 262 aa8.14□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Tecpr2Q3UH45 1423 aa8.14□□□□□ -1.11
Ube4a-202ENSMUST00000117549 UacaQ8CGB3 1411 aa8.14□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Kif16bB1AVY7 1312 aa8.14□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Ppp1r3fQ9JIG4 799 aa8.14□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Tmem131lQ3U3D7 1597 aa8.14□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Usp54Q8BL06 1588 aaKnown RBP8.14□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Nol12Q8BG17 217 aa8.13□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Ppm1gQ61074 542 aa8.13□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Ipo8Q7TMY7 1010 aa8.13□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Tnpo1Q8BFY9 898 aaKnown RBP8.13□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Robo2Q7TPD3 1470 aa8.13□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Ccdc146E9Q9F7 977 aa8.12□□□□□ -1.11
Ube4a-202ENSMUST00000117549 ShprhQ7TPQ3 1674 aa8.12□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Afap1Q80YS6 731 aa8.12□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Med1Q925J9 1575 aa8.12□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Rims2Q9EQZ7 1530 aa8.12□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Lamc1P02468 1607 aaKnown RBP8.12□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Ppp2r1aQ76MZ3 589 aa8.12□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Erich6bQ9D4S6 220 aa8.12□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Asxl1P59598 1514 aa8.11□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Gtf2e1Q9D0D5 440 aa8.11□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Zc3h13E9Q784 1729 aaKnown RBP8.11□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Spag9Q58A65 1321 aaKnown RBP8.11□□□□□ -1.11
Ube4a-202ENSMUST00000117549 MyclP10166 368 aa8.11□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Nrxn3Q6P9K9 1571 aa8.11□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Usp40Q8BWR4 1235 aa8.1□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Clstn2Q9ER65 966 aa8.1□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Kif1bQ60575 1816 aaKnown RBP8.1□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Rock1P70335 1354 aa8.1□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Prex1Q69ZK0 1650 aa8.1□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Tarbp1E9Q368 1579 aa8.1□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Ino80Q6ZPV2 1559 aa8.1□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Fam184bQ0KK56 942 aa8.1□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Pknox2Q8BG99 474 aa8.1□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Ccdc60Q8C4J0 545 aa8.1□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Ccdc183A2AJB1 534 aa8.09□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Sox12Q04890 314 aa8.09□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Tsen2Q6P7W5 460 aa8.09□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Prkrip1Q9CWV6 186 aaKnown RBP8.09□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Mink1Q9JM52 1308 aa8.09□□□□□ -1.11
Ube4a-202ENSMUST00000117549 Trim44Q9QXA7 346 aa8.09□□□□□ -1.12
Ube4a-202ENSMUST00000117549 PrxO55103 1391 aa8.08□□□□□ -1.12
Ube4a-202ENSMUST00000117549 Ylpm1Q9R0I7 1386 aaKnown RBP8.08□□□□□ -1.12
Ube4a-202ENSMUST00000117549 Ankrd36D3Z4K0 1415 aa8.08□□□□□ -1.12
Ube4a-202ENSMUST00000117549 Ssh2Q5SW75 1423 aa8.08□□□□□ -1.12
Ube4a-202ENSMUST00000117549 Scaf11E9PZM7 1456 aaKnown RBP8.08□□□□□ -1.12
Ube4a-202ENSMUST00000117549 Adgrb3Q80ZF8 1522 aa8.08□□□□□ -1.12
Ube4a-202ENSMUST00000117549 Gli3Q61602 1583 aa8.08□□□□□ -1.12
Ube4a-202ENSMUST00000117549 Fgd1P52734 960 aa8.08□□□□□ -1.12
Ube4a-202ENSMUST00000117549 AnkarA2RT91 1465 aa8.08□□□□□ -1.12
Ube4a-202ENSMUST00000117549 PtmaP26350 111 aa8.08□□□□□ -1.12
Ube4a-202ENSMUST00000117549 Dmrtc1Q9D9R7 182 aa8.08□□□□□ -1.12
Ube4a-202ENSMUST00000117549 CalcaP70160 136 aa8.07□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 56.1 ms